Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 4.1e-93 344.7 176 100.0
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.2e-90 335.1 190 92.6
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 1.5e-87 326.2 176 96.6
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 7.4e-87 323.9 176 95.5
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 7.4e-87 323.9 176 95.5
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 1.7e-86 322.8 176 95.5
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 6.3e-86 320.9 183 91.8
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 6.3e-86 320.9 176 94.9
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 8.2e-86 320.5 175 95.4
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 1.4e-85 319.7 176 94.9
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 1.4e-85 319.7 176 94.9
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 1.8e-85 319.3 176 93.2
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 2.4e-85 318.9 183 91.3
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 7.0e-85 317.4 176 94.3
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 9.1e-85 317.0 176 93.8
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 9.1e-85 317.0 176 93.2
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 9.1e-85 317.0 176 93.2
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 1.2e-84 316.6 176 92.6
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 2.0e-84 315.8 176 93.8
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 2.0e-84 315.8 176 93.2
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 2.0e-84 315.8 176 92.0
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 2.0e-84 315.8 176 92.6
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 2.6e-84 315.5 175 93.7
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 3.5e-84 315.1 176 93.2
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.5e-84 315.1 176 93.8
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 3.5e-84 315.1 176 92.6
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 3.5e-84 315.1 176 92.6
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 3.5e-84 315.1 176 92.0
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 3.5e-84 315.1 176 92.6
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 4.5e-84 314.7 176 92.6
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.9e-84 314.3 176 92.0
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 5.9e-84 314.3 175 93.7
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 7.7e-84 313.9 176 92.0
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 1.0e-83 313.5 175 92.6
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 1.3e-83 313.2 176 92.0
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.3e-83 313.2 176 92.0
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.3e-83 313.2 176 92.0
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 1.3e-83 313.2 176 92.6
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 1.7e-83 312.8 176 91.5
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 1.7e-83 312.8 176 92.6
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 2.9e-83 312.0 176 92.0
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 3.8e-83 311.6 176 91.5
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 5.0e-83 311.2 176 90.9
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 5.0e-83 311.2 176 90.9
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 6.5e-83 310.8 176 91.5
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 6.5e-83 310.8 174 92.5
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 6.5e-83 310.8 174 92.5
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 6.5e-83 310.8 174 92.5
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 8.5e-83 310.5 176 91.5
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 1.1e-82 310.1 176 91.5
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 1.1e-82 310.1 176 91.5
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 1.5e-82 309.7 176 92.0
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 3.2e-82 308.5 173 93.6
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 4.2e-82 308.1 176 90.3
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 4.2e-82 308.1 176 90.3
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 5.5e-82 307.8 174 89.7
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 1.6e-81 306.2 176 89.8
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 1.6e-81 306.2 176 89.8
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 1.6e-81 306.2 176 89.8
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 1.6e-81 306.2 176 90.3
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 2.1e-81 305.8 175 90.9
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 2.1e-81 305.8 176 89.8
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 3.6e-81 305.1 176 89.8
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 3.6e-81 305.1 176 89.2
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 1.8e-80 302.8 175 89.7
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 2.3e-80 302.4 174 89.7
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 4.0e-80 301.6 176 87.5
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 1.2e-79 300.1 194 82.0
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 2.0e-79 299.3 173 88.4
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 3.3e-79 298.5 172 88.4
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 4.4e-79 298.1 176 89.2
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 3.7e-78 295.0 163 92.6
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 4.8e-78 294.7 174 86.8
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 9.1e-77 290.4 174 85.1
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 3.5e-76 288.5 163 90.8
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 4.5e-76 288.1 173 85.0
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 1.1e-74 283.5 168 87.5
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 9.4e-74 280.4 170 85.3
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 6.1e-73 277.7 157 91.7
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 2.3e-72 275.8 153 94.1
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 2.3e-72 275.8 156 91.0
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 2.3e-72 275.8 157 90.4
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.2e-71 273.5 150 92.0
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 7.5e-71 270.8 153 92.2
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 2.2e-70 269.2 153 91.5
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 4.8e-70 268.1 143 93.7
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 1.8e-69 266.2 140 95.7
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 2.4e-69 265.8 139 96.4
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 1.6e-68 263.1 140 94.3
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 1.3e-67 260.0 175 73.1
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 4.2e-66 255.0 268 58.2
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 2.1e-65 252.7 176 77.8
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 2.0e-63 246.1 170 78.2
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 1.7e-62 243.0 176 75.6
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 1.7e-62 243.0 176 76.7
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.4e-61 239.2 174 74.1
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 1.6e-60 236.5 134 92.5
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 1.3e-59 233.4 229 62.9
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 2.3e-59 232.6 136 90.4
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 8.0e-57 224.2 131 90.8
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 3.0e-56 222.2 239 58.2
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.2e-55 220.3 129 90.7
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.2e-55 220.3 129 90.7
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 9.8e-55 217.2 135 83.7
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 8.6e-51 204.1 109 96.3
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 2.5e-50 202.6 110 93.6
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 3.1e-48 195.7 175 57.1
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 1.3e-43 180.3 121 80.2
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 1.8e-40 169.9 182 50.5
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 7.5e-39 164.5 176 55.1
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 9.5e-34 147.5 118 68.6
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 3.1e-32 142.5 76 93.4
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 5.2e-32 141.7 81 90.1
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 9.9e-31 137.5 81 87.7
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 3.1e-24 115.9 79 75.9
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 5.2e-24 115.2 90 68.9
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 2.0e-23 113.2 60 93.3
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 1.0e-19 100.9 50 96.0
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 7.1e-13 78.2 38 89.5
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.9e-10 70.1 39 82.1
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 2.4e-08 63.2 59 57.6


User provided reference genes

Program Settings