Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G2236 Fragaria x ananassa HOM05D004217 ORTHO05D005561 3.1e-24 114.4 60 100.0
Duzib264G1114 Durio zibethinus HOM05D004217 ORTHO05D005561 1.2e-15 85.9 70 74.3
CiPaw.10G038800 Carya illinoinensis HOM05D004217 ORTHO05D005561 2.0e-15 85.1 70 74.3
MD12G1092800 Malus domestica HOM05D004217 ORTHO05D005561 2.0e-15 85.1 70 74.3
MD14G1084500 Malus domestica HOM05D004217 ORTHO05D005561 2.0e-15 85.1 70 74.3
RcHm_v2.0_Chr2g0125061 Rosa chinensis HOM05D004217 ORTHO05D005561 2.0e-15 85.1 70 74.3
Thecc.01G136700 Theobroma cacao HOM05D004217 ORTHO05D005561 7.5e-15 83.2 70 71.4
Ciclev10021431m.g Citrus clementina HOM05D004217 ORTHO05D005561 9.8e-15 82.8 70 71.4
Haze_19719 Corylus avellana HOM05D004217 ORTHO05D005561 9.8e-15 82.8 70 71.4
QL07p008431 Quercus lobata HOM05D004217 ORTHO05D005561 1.3e-14 82.4 69 71.0
GSVIVG01027868001 Vitis vinifera HOM05D004217 ORTHO05D005561 1.7e-14 82.0 70 71.4
Eucgr.A00412 Eucalyptus grandis HOM05D004217 ORTHO05D005561 2.2e-14 81.6 70 71.4
FvH4_6g25170 Fragaria vesca HOM05D004217 ORTHO05D005561 2.2e-14 81.6 70 71.4
FAN09G3751 Fragaria x ananassa HOM05D004217 ORTHO05D005561 2.2e-14 81.6 70 71.4
FAN14G1007 Fragaria x ananassa HOM05D004217 ORTHO05D005561 2.2e-14 81.6 70 71.4
Gohir.A03G048200 Gossypium hirsutum HOM05D004217 ORTHO05D005561 2.2e-14 81.6 70 71.4
Gohir.A11G057400 Gossypium hirsutum HOM05D004217 ORTHO05D005561 2.2e-14 81.6 70 71.4
Gohir.A12G042000 Gossypium hirsutum HOM05D004217 ORTHO05D005561 2.2e-14 81.6 70 71.4
Gohir.D03G072900 Gossypium hirsutum HOM05D004217 ORTHO05D005561 2.2e-14 81.6 70 71.4
Gohir.D11G061600 Gossypium hirsutum HOM05D004217 ORTHO05D005561 2.2e-14 81.6 70 71.4
Gorai.007G066400 Gossypium raimondii HOM05D004217 ORTHO05D005561 2.2e-14 81.6 70 71.4
TWI77G0241 Tripterygium wilfordii HOM05D004217 ORTHO05D005561 2.2e-14 81.6 70 70.0
TWI53G1501 Tripterygium wilfordii HOM05D004217 ORTHO05D005561 2.9e-14 81.3 70 70.0
Actinidia39171 Actinidia chinensis HOM05D004217 ORTHO05D005561 3.7e-14 80.9 70 71.4
ClCG04G004230 Citrullus lanatus HOM05D004217 ORTHO05D005561 3.7e-14 80.9 70 68.6
CsaV3_3G041090 Cucumis sativus L. HOM05D004217 ORTHO05D005561 3.7e-14 80.9 70 68.6
CsaV3_4G027820 Cucumis sativus L. HOM05D004217 ORTHO05D005561 3.7e-14 80.9 70 68.6
Sed0000264 Sechium edule HOM05D004217 ORTHO05D005561 4.9e-14 80.5 70 70.0
Gohir.A03G146300 Gossypium hirsutum HOM05D004217 ORTHO05D005561 6.4e-14 80.1 70 70.0
Gohir.D11G296900 Gossypium hirsutum HOM05D004217 ORTHO05D005561 6.4e-14 80.1 70 70.0
Aqoxy2G04056 Aquilegia oxysepala HOM05D004217 ORTHO05D005561 8.3e-14 79.7 70 68.6
CSS0007689 Camellia sinensis var. sinensis HOM05D004217 ORTHO05D005561 8.3e-14 79.7 70 70.0
CANSAT78G1576 Cannabis sativa HOM05D004217 ORTHO05D005561 8.3e-14 79.7 70 71.4
Cfa016692 Carpinus fangiana HOM05D004217 ORTHO05D005561 8.3e-14 79.7 70 70.0
DCAR_020547 Daucus carota HOM05D004217 ORTHO05D005561 8.3e-14 79.7 70 71.4
Gohir.D11G169000 Gossypium hirsutum HOM05D004217 ORTHO05D005561 1.1e-13 79.3 70 70.0
Atru.chr1.1483 Acer truncatum HOM05D004217 ORTHO05D005561 1.4e-13 79.0 70 68.6
COL.COLO4_35807 Corchorus olitorius HOM05D004217 ORTHO05D005561 1.4e-13 79.0 70 68.6
Gohir.A07G124200 Gossypium hirsutum HOM05D004217 ORTHO05D005561 1.4e-13 79.0 70 70.0
PGR142G4280 Punica granatum HOM05D004217 ORTHO05D005561 1.4e-13 79.0 70 67.1
SalBow1G4717 Salvia bowleyana HOM05D004217 ORTHO05D005561 1.4e-13 79.0 71 69.0
Manes.09G007800 Manihot esculenta HOM05D004217 ORTHO05D005561 1.9e-13 78.6 70 68.6
PSO339G2795 Papaver somniferum HOM05D004217 ORTHO05D005561 1.9e-13 78.6 70 68.6
MSTRG.15652 Avicennia marina HOM05D004217 ORTHO05D005561 2.4e-13 78.2 70 68.6
CAN.G541.30 Capsicum annuum HOM05D004217 ORTHO05D005561 2.4e-13 78.2 70 68.6
Nitab4.5_0000571g0060 Nicotiana tabacum HOM05D004217 ORTHO05D005561 2.4e-13 78.2 70 68.6
Nitab4.5_0001874g0050 Nicotiana tabacum HOM05D004217 ORTHO05D005561 2.4e-13 78.2 70 68.6
Solyc10g079740.2 Solanum lycopersicum HOM05D004217 ORTHO05D005561 2.4e-13 78.2 70 68.6
Sopen10g030370 Solanum pennellii HOM05D004217 ORTHO05D005561 2.4e-13 78.2 70 68.6
MELO3C019047.2 Cucumis melo HOM05D004217 ORTHO05D005561 3.2e-13 77.8 70 65.7
Glyma.07G084800 Glycine max HOM05D004217 ORTHO05D005561 3.2e-13 77.8 70 68.6
Glyma.09G192100 Glycine max HOM05D004217 ORTHO05D005561 3.2e-13 77.8 70 68.6
Nn7g37855 Nelumbo nucifera HOM05D004217 ORTHO05D005561 3.2e-13 77.8 70 67.1
TAR369G0413 Trochodendron aralioides HOM05D004217 ORTHO05D005561 3.2e-13 77.8 69 68.1
MBI15_g40529_MAGBIO Magnolia biondii HOM05D004217 ORTHO05D005561 4.1e-13 77.4 70 65.7
Nn7g36831 Nelumbo nucifera HOM05D004217 ORTHO05D005561 4.1e-13 77.4 70 65.7
HanXRQChr06g0176941 Helianthus annuus HOM05D004217 ORTHO05D005561 5.4e-13 77.0 69 68.1
HanXRQChr10g0316411 Helianthus annuus HOM05D004217 ORTHO05D005561 5.4e-13 77.0 69 68.1
PGSC0003DMG400029850 Solanum tuberosum HOM05D004217 ORTHO05D005561 5.4e-13 77.0 70 67.1
Cpa.g.sc5.203 Carica papaya HOM05D004217 ORTHO05D005561 7.1e-13 76.6 70 65.7
Migut.K00125 Erythranthe guttata HOM05D004217 ORTHO05D005561 7.1e-13 76.6 70 67.1
Prupe.7G043700 Prunus persica HOM05D004217 ORTHO05D005561 7.1e-13 76.6 70 67.1
SHI39628 Sapria himalayana HOM05D004217 ORTHO05D005561 7.1e-13 76.6 70 65.7
Dinv34387 Davidia involucrata HOM05D004217 ORTHO05D005561 9.2e-13 76.3 70 68.6
SGA_v2.0_scaffold273G46404 Striga asiatica HOM05D004217 ORTHO05D005561 9.2e-13 76.3 70 67.1
ECA236G0163 Erigeron canadensis HOM05D004217 ORTHO05D005561 1.2e-12 75.9 69 66.7
Hma1.2p1_0521F.1_g171490 Hydrangea macrophylla HOM05D004217 ORTHO05D005561 1.2e-12 75.9 69 66.7
Nitab4.5_0000636g0010 Nicotiana tabacum HOM05D004217 ORTHO05D005561 1.2e-12 75.9 68 67.6
PSO384G3185 Papaver somniferum HOM05D004217 ORTHO05D005561 1.2e-12 75.9 70 67.1
CAN.G322.6 Capsicum annuum HOM05D004217 ORTHO05D005561 1.6e-12 75.5 70 67.1
MBI14_g19459_MAGBIO Magnolia biondii HOM05D004217 ORTHO05D005561 1.6e-12 75.5 70 65.7
Zm00001eb178240 Zea mays HOM05D004217 ORTHO05D005561 1.6e-12 75.5 68 66.2
RhsimUnG0216700 Rhododendron simsii HOM05D000657 ORTHO05D002092 2.1e-12 75.1 70 67.1
RhsimUnG0219800 Rhododendron simsii HOM05D004217 ORTHO05D005561 2.1e-12 75.1 70 67.1
Sc13g0001310 Simmondsia chinensis HOM05D004217 ORTHO05D005561 2.1e-12 75.1 69 63.8
VMungo0464G0563 Vigna mungo HOM05D004217 ORTHO05D005561 2.1e-12 75.1 70 68.6
GSVIVG01034596001 Vitis vinifera HOM05D004217 ORTHO05D005561 2.1e-12 75.1 70 68.6
Lj2A395G21 Lonicera japonica HOM05D004217 ORTHO05D005561 2.7e-12 74.7 70 65.7
unitig_748.g7226 Utricularia gibba HOM05D004217 ORTHO05D005561 2.7e-12 74.7 70 65.7
vmacro07818 Vaccinium macrocarpon HOM05D004217 ORTHO05D005561 2.7e-12 74.7 63 69.8
Peaxi162Scf00620g00012 Petunia axillaris HOM05D004217 ORTHO05D005561 3.5e-12 74.3 67 67.2
Peaxi162Scf01378g00115 Petunia axillaris HOM05D004217 ORTHO05D005561 3.5e-12 74.3 67 67.2
Potri.006G046200 Populus trichocarpa HOM05D004217 ORTHO05D005561 3.5e-12 74.3 70 64.3
HPP92_018983 Vanilla planifolia HOM05D004217 ORTHO05D005561 3.5e-12 74.3 69 63.8
CDE04G1366 Ceratophyllum demersum HOM05D004217 ORTHO05D005561 4.6e-12 73.9 70 62.9
Os08g0240600 Oryza sativa ssp. japonica HOM05D004217 ORTHO05D005561 4.6e-12 73.9 67 65.7
Ca_16232_v3 Cicer arietinum L. HOM05D004217 ORTHO05D005561 6.0e-12 73.6 68 67.6
Lalb_Chr04g0255801 Lupinus albus HOM05D004217 ORTHO05D005561 6.0e-12 73.6 68 67.6
Sabra06G0031800 Salix brachista HOM05D004217 ORTHO05D005561 6.0e-12 73.6 70 62.9
EL10Ac6g14020 Beta vulgaris HOM05D004217 ORTHO05D005561 7.8e-12 73.2 70 62.9
Lsat_1_v5_gn_8_82561 Lactuca sativa HOM05D004217 ORTHO05D005561 7.8e-12 73.2 70 64.3
TAR623G0725 Trochodendron aralioides HOM05D004217 ORTHO05D005561 7.8e-12 73.2 70 64.3
EL10Ac3g07207 Beta vulgaris HOM05D004217 ORTHO05D005561 1.0e-11 72.8 70 62.9
Phvul.004G165200 Phaseolus vulgaris HOM05D004217 ORTHO05D005561 1.0e-11 72.8 70 67.1
QL07p008692 Quercus lobata HOM05D004217 ORTHO05D005561 1.0e-11 72.8 65 67.7
AUR62030333 Chenopodium quinoa HOM05D004217 ORTHO05D005561 1.3e-11 72.4 70 61.4
AUR62031989 Chenopodium quinoa HOM05D004217 ORTHO05D005561 1.3e-11 72.4 70 61.4
Cc06_g18810 Coffea canephora HOM05D004217 ORTHO05D005561 1.3e-11 72.4 68 64.7
Lj6g0025691 Lotus japonicus HOM05D004217 ORTHO05D005561 1.7e-11 72.0 68 66.2
Lalb_Chr17g0341031 Lupinus albus HOM05D004217 ORTHO05D005561 1.7e-11 72.0 68 66.2
THA.LOC104824417 Tarenaya hassleriana HOM05D004217 ORTHO05D005561 1.7e-11 72.0 70 64.3
arahy.Tifrunner.gnm1.ann1.35MU93 Arachis hypogaea HOM05D004217 ORTHO05D005561 3.0e-11 71.2 68 66.2
arahy.Tifrunner.gnm1.ann1.GAG45E Arachis hypogaea HOM05D004217 ORTHO05D005561 3.0e-11 71.2 68 66.2
Hund24631 Selenicereus undatus HOM05D004217 ORTHO05D005561 3.9e-11 70.9 70 62.9
Oeu029495.1 Olea europaea HOM05D004217 ORTHO05D005561 5.1e-11 70.5 70 64.3
TPR.G15791 Trifolium pratense HOM05D004217 ORTHO05D005561 5.1e-11 70.5 68 64.7
TPR.G5939 Trifolium pratense HOM05D004217 ORTHO05D005561 5.1e-11 70.5 68 64.7
Psat5g112680 Pisum sativum HOM05D004217 ORTHO05D005561 8.6e-11 69.7 68 63.2
BcaC01g05340 Brassica carinata HOM05D004217 ORTHO05D005561 1.5e-10 68.9 62 64.5
A03p23240 Brassica napus HOM05D004217 ORTHO05D005561 1.5e-10 68.9 62 64.5
C03p27740 Brassica napus HOM05D004217 ORTHO05D005561 1.5e-10 68.9 62 64.5
BolC3t15143H Brassica oleracea HOM05D004217 ORTHO05D005561 1.5e-10 68.9 62 64.5
BraA03t11543Z Brassica rapa HOM05D004217 ORTHO05D005561 1.5e-10 68.9 62 64.5
Thhalv10017004m.g Eutrema salsugineum HOM05D004217 ORTHO05D005561 1.5e-10 68.9 62 64.5
Sp4g23650 Schrenkiella parvula HOM05D004217 ORTHO05D005561 1.5e-10 68.9 62 64.5
Sc25g0005400 Simmondsia chinensis HOM05D004217 ORTHO05D005561 1.5e-10 68.9 70 60.0
THA.LOC104803276 Tarenaya hassleriana HOM05D004217 ORTHO05D005561 1.9e-10 68.6 69 60.9
Ah.04g151110 Amaranthus hybridus HOM05D004217 ORTHO05D005561 2.5e-10 68.2 70 58.6
Pp3c1_31980 Physcomitrium patens HOM05D004217 ORTHO05D005561 2.5e-10 68.2 75 58.7
Carub.0004s2365 Capsella rubella HOM05D004217 ORTHO05D005561 3.3e-10 67.8 62 62.9
Actinidia20826 Actinidia chinensis HOM05D004217 ORTHO05D005561 4.3e-10 67.4 70 62.9
ATR0580G123 Amborella trichopoda HOM05D004217 ORTHO05D005561 4.3e-10 67.4 70 61.4
CARHR136470 Cardamine hirsuta HOM05D004217 ORTHO05D005561 4.3e-10 67.4 62 62.9
SalBow6G4102 Salvia bowleyana HOM05D004217 ORTHO05D005561 5.6e-10 67.0 64 62.5
BcaB01g03471 Brassica carinata HOM05D004217 ORTHO05D005561 7.3e-10 66.6 62 62.9
C04p68950 Brassica napus HOM05D004217 ORTHO05D005561 7.3e-10 66.6 62 61.3
BolC4t28396H Brassica oleracea HOM05D004217 ORTHO05D005561 7.3e-10 66.6 62 61.3
Aa31LG5G11710 Aethionema arabicum HOM05D004217 ORTHO05D005561 1.2e-09 65.9 63 61.9
AT2G41350 Arabidopsis thaliana HOM05D004217 ORTHO05D005561 2.1e-09 65.1 62 59.7
AL4G39350 Arabidopsis lyrata HOM05D004217 ORTHO05D005561 2.8e-09 64.7 61 60.7
DCAR_027531 Daucus carota HOM05D004217 ORTHO05D005561 2.8e-09 64.7 36 97.2
CSS0039334 Camellia sinensis var. sinensis HOM05D004217 ORTHO05D005561 3.6e-09 64.3 70 57.1
Medtr3g079220 Medicago truncatula HOM05D004217 ORTHO05D005561 3.6e-09 64.3 65 63.1
vmacro08529 Vaccinium macrocarpon HOM05D004217 ORTHO05D005561 6.2e-09 63.5 68 61.8
SMO118G0157 Selaginella moellendorffii HOM05D004217 ORTHO05D005561 1.1e-08 62.8 68 55.9
BcaC02g12897 Brassica carinata HOM05D004217 ORTHO05D005561 1.4e-08 62.4 61 59.0
Actinidia32317 Actinidia chinensis HOM05D004217 ORTHO05D005561 1.8e-08 62.0 68 58.8
AagrBONN_evm.TU.Sc2ySwM_362.1682 Anthoceros agrestis HOM05D004217 ORTHO05D005561 8.9e-08 59.7 67 55.2
A04p31520 Brassica napus HOM05D004217 ORTHO05D005561 4.4e-07 57.4 39 76.9
BraA04t18609Z Brassica rapa HOM05D004217 ORTHO05D005561 4.4e-07 57.4 39 76.9
Mapoly0239s0006 Marchantia polymorpha HOM05D004217 ORTHO05D005561 7.6e-07 56.6 34 82.4
Rhsim04G0175000 Rhododendron simsii HOM05D004217 ORTHO05D005561 1.3e-06 55.8 68 57.4
FAN17G2754 Fragaria x ananassa HOM05D004217 ORTHO05D005561 6.4e-06 53.5 52 67.3


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