Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.3e-41 172.6 84 100.0
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.0e-34 148.7 81 92.6
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 1.9e-32 142.1 72 98.6
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.9e-32 142.1 72 98.6
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.9e-32 142.1 72 98.6
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.6e-32 140.6 72 97.2
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 2.1e-31 138.7 72 95.8
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 1.2e-29 132.9 74 85.1
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 3.4e-29 131.3 76 82.9
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 7.5e-29 130.2 74 86.5
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.9e-28 128.3 74 85.1
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 3.7e-28 127.9 74 81.1
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 3.7e-28 127.9 72 86.1
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 8.3e-28 126.7 72 83.3
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 8.3e-28 126.7 74 82.4
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 8.3e-28 126.7 72 86.1
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 8.3e-28 126.7 74 82.4
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 1.9e-27 125.6 71 84.5
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 2.4e-27 125.2 74 81.1
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 2.4e-27 125.2 74 81.1
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 7.0e-27 123.6 72 84.7
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 9.2e-27 123.2 72 84.7
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 1.2e-26 122.9 72 81.9
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.6e-26 122.5 74 81.1
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 1.6e-26 122.5 72 81.9
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 2.0e-26 122.1 72 80.6
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.0e-26 122.1 72 81.9
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 2.7e-26 121.7 72 84.7
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 3.5e-26 121.3 77 74.0
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 3.5e-26 121.3 77 74.0
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 4.6e-26 120.9 71 78.9
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 4.6e-26 120.9 74 79.7
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 6.0e-26 120.6 72 81.9
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 6.0e-26 120.6 72 83.3
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 6.0e-26 120.6 72 80.6
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 6.0e-26 120.6 72 80.6
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 7.8e-26 120.2 72 80.6
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 7.8e-26 120.2 72 80.6
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 7.8e-26 120.2 72 81.9
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 7.8e-26 120.2 68 83.8
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 1.0e-25 119.8 70 81.4
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 1.0e-25 119.8 68 83.8
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 1.0e-25 119.8 68 83.8
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 1.0e-25 119.8 68 83.8
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 1.0e-25 119.8 68 83.8
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 1.0e-25 119.8 72 80.6
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 1.3e-25 119.4 72 80.6
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 2.3e-25 118.6 72 77.8
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 3.0e-25 118.2 72 79.2
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 3.0e-25 118.2 72 77.8
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 3.9e-25 117.9 69 76.8
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 8.6e-25 116.7 72 79.2
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 1.1e-24 116.3 71 76.1
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 1.5e-24 115.9 68 79.4
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 1.5e-24 115.9 68 79.4
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 1.5e-24 115.9 84 70.2
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 1.9e-24 115.5 71 76.1
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 1.9e-24 115.5 72 77.8
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 1.9e-24 115.5 74 74.3
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 2.5e-24 115.2 70 77.1
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 3.3e-24 114.8 71 74.6
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 3.3e-24 114.8 72 80.6
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 7.3e-24 113.6 75 78.7
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 9.5e-24 113.2 72 75.0
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 1.6e-23 112.5 69 78.3
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 2.1e-23 112.1 73 78.1
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 2.1e-23 112.1 76 71.1
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 2.8e-23 111.7 66 78.8
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 6.2e-23 110.5 68 77.9
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 8.1e-23 110.2 73 78.1
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 1.1e-22 109.8 72 70.8
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 1.4e-22 109.4 64 79.7
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.8e-22 109.0 69 75.4
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 8.9e-22 106.7 71 76.1
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 8.9e-22 106.7 70 74.3
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 1.2e-21 106.3 85 67.1
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 1.5e-21 105.9 59 83.1
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 1.5e-21 105.9 70 74.3
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 5.8e-21 104.0 72 70.8
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 9.9e-21 103.2 70 71.4
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 1.3e-20 102.8 84 64.3
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 2.9e-20 101.7 72 73.6
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 2.9e-20 101.7 72 69.4
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 1.6e-18 95.9 131 45.0
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 2.1e-18 95.5 61 72.1
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 2.1e-18 95.5 101 55.4
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 2.7e-18 95.1 61 73.8
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 4.6e-18 94.4 52 88.5
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 1.3e-17 92.8 50 90.0
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 1.7e-17 92.4 72 68.1
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 2.3e-17 92.0 69 69.6
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.5e-16 89.4 137 41.6
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 2.1e-15 85.5 51 78.4
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 5.2e-14 80.9 168 35.1
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 7.6e-13 77.0 68 61.8
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.9e-12 75.1 42 85.7
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 6.4e-12 73.9 42 81.0
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 1.4e-11 72.8 60 60.0
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 3.2e-11 71.6 39 84.6
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 1.6e-10 69.3 41 78.0
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 2.7e-10 68.6 42 78.6
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 2.7e-10 68.6 42 76.2
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 4.6e-10 67.8 52 59.6
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 6.0e-10 67.4 42 78.6
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 6.0e-10 67.4 42 76.2
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 5.1e-09 64.3 35 82.9
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 6.6e-09 63.9 38 76.3
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 1.9e-08 62.4 36 77.8
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 7.3e-08 60.5 41 70.7
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 2.1e-07 58.9 35 77.1
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 1.1e-06 56.6 40 62.5
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 1.1e-06 56.6 32 81.2
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 2.4e-06 55.5 61 47.5
Actinidia00061 Actinidia chinensis HOM05D006941 ORTHO05D008361 9.0e-06 53.5 30 83.3


User provided reference genes

Program Settings