Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.4e-130 469.5 231 100.0
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.2e-118 429.1 213 98.1
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 3.7e-118 428.3 213 97.7
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 9.1e-117 423.7 213 97.2
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 1.2e-116 423.3 213 97.2
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 2.2e-110 402.5 213 92.0
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 1.3e-107 393.3 213 89.7
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 7.4e-103 377.5 212 84.4
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 9.7e-103 377.1 212 85.8
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 1.1e-101 373.6 213 84.5
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 5.3e-101 371.3 212 84.4
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 1.9e-98 362.8 212 82.1
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 5.5e-98 361.3 211 82.5
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 1.2e-97 360.1 212 79.7
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 1.6e-97 359.8 212 79.7
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 2.1e-97 359.4 210 81.9
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 2.7e-97 359.0 211 82.0
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 2.7e-97 359.0 212 80.7
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 4.7e-97 358.2 211 82.0
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 1.0e-96 357.1 212 81.6
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 1.4e-96 356.7 216 81.0
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 4.0e-96 355.1 209 83.7
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 5.2e-96 354.8 216 79.6
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 6.7e-96 354.4 212 78.8
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 8.8e-96 354.0 212 80.2
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 8.8e-96 354.0 212 79.7
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 8.8e-96 354.0 212 79.7
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 1.2e-95 353.6 212 79.2
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 1.2e-95 353.6 209 81.3
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 1.5e-95 353.2 210 78.6
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 2.0e-95 352.8 211 80.6
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 2.6e-95 352.4 212 79.7
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 3.3e-95 352.1 212 79.7
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 4.4e-95 351.7 210 80.0
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 5.7e-95 351.3 211 80.1
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 7.5e-95 350.9 212 80.2
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 7.5e-95 350.9 212 79.7
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 9.7e-95 350.5 209 79.9
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 9.7e-95 350.5 209 78.9
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 1.7e-94 349.7 212 79.7
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 2.2e-94 349.4 209 81.3
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 2.8e-94 349.0 227 74.9
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 6.3e-94 347.8 211 78.7
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 1.1e-93 347.1 209 78.5
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 1.1e-93 347.1 210 77.1
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 1.8e-93 346.3 213 78.4
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 2.4e-93 345.9 210 78.1
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 2.4e-93 345.9 210 78.1
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 4.1e-93 345.1 209 78.5
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 4.1e-93 345.1 211 77.7
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 7.0e-93 344.4 211 78.7
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 1.2e-92 343.6 225 74.2
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 1.2e-92 343.6 210 77.6
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 1.2e-92 343.6 212 78.3
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 2.0e-92 342.8 212 78.3
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 2.7e-92 342.4 211 77.3
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 2.7e-92 342.4 210 77.6
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 4.5e-92 341.7 211 78.2
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 7.7e-92 340.9 211 77.7
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 1.7e-91 339.7 213 77.9
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 2.2e-91 339.3 211 78.2
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 2.9e-91 339.0 209 78.9
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 2.9e-91 339.0 209 78.9
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 8.5e-91 337.4 210 78.6
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 1.1e-90 337.0 211 78.2
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 1.1e-90 337.0 211 77.7
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 1.5e-90 336.7 211 75.4
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 2.5e-90 335.9 209 76.1
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 2.5e-90 335.9 211 77.3
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 5.5e-90 334.7 213 77.5
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 5.5e-90 334.7 211 76.8
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 9.4e-90 334.0 213 76.5
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 1.2e-89 333.6 211 77.3
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 2.7e-89 332.4 197 79.7
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 4.7e-89 331.6 211 76.3
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 4.7e-89 331.6 211 76.3
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 8.0e-89 330.9 213 76.5
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 2.3e-88 329.3 211 75.8
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 4.0e-88 328.6 211 75.4
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 5.2e-88 328.2 215 75.8
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 6.8e-88 327.8 212 75.9
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 8.8e-88 327.4 211 75.4
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 8.8e-88 327.4 211 75.4
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 3.4e-87 325.5 213 75.1
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 1.4e-85 320.1 210 75.2
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.8e-85 319.7 201 77.1
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 4.1e-85 318.5 211 72.5
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 1.1e-82 310.5 198 75.8
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 9.5e-82 307.4 259 66.4
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 1.2e-81 307.0 210 72.4
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 2.8e-81 305.8 213 69.0
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 3.6e-81 305.4 207 70.0
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 8.0e-81 304.3 214 71.0
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 1.4e-80 303.5 210 70.0
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 1.2e-79 300.4 227 68.7
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 4.9e-78 295.0 211 68.7
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 4.5e-76 288.5 212 67.5
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 1.1e-74 283.9 203 70.4
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 4.3e-74 282.0 215 67.9
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 9.8e-71 270.8 184 66.3
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 1.7e-70 270.0 199 66.3
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 3.7e-70 268.9 219 58.9
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 4.9e-70 268.5 185 71.9
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 1.9e-69 266.5 143 88.8
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 1.6e-68 263.5 188 66.5
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 4.6e-68 261.9 144 86.1
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 5.2e-64 248.4 144 80.6
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 2.4e-61 239.6 144 79.9
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 1.6e-60 236.9 146 76.0
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 6.2e-57 224.9 177 58.8
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 3.5e-52 209.1 103 98.1
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 6.8e-48 194.9 188 48.9
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 2.4e-37 159.8 216 46.8
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 1.0e-27 127.9 97 63.9
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 1.3e-27 127.5 85 70.6
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 3.3e-26 122.9 71 80.3
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 3.4e-23 112.8 87 63.2
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.3e-22 110.9 68 75.0
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 4.9e-22 109.0 71 80.3
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 8.4e-22 108.2 84 58.3
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 5.1e-11 72.4 140 36.4
arahy.Tifrunner.gnm1.ann1.A7EL5Y Arachis hypogaea HOM05D003181 ORTHO05D003689 1.4e-08 64.3 41 63.4
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 2.2e-06 57.0 141 27.7
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 2.9e-06 56.6 141 27.0
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 2.9e-06 56.6 141 27.0
Sc11g0004810 Simmondsia chinensis HOM05D006539 ORTHO05D008694 3.8e-06 56.2 140 28.6
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 6.5e-06 55.5 141 27.0
Potri.001G150900 Populus trichocarpa HOM05D003893 ORTHO05D005167 6.5e-06 55.5 87 33.3
Thecc.04G090200 Theobroma cacao HOM05D006539 ORTHO05D008694 8.5e-06 55.1 141 28.4


User provided reference genes

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