Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G2021 Fragaria x ananassa HOM05D003796 ORTHO05D004486 2.0e-77 292.4 149 100.0
FAN12G2909 Fragaria x ananassa HOM05D003796 ORTHO05D004486 5.2e-73 277.7 149 96.0
FvH4_4g10500 Fragaria vesca HOM05D003796 ORTHO05D004486 2.1e-66 255.8 148 89.2
FAN07G1083 Fragaria x ananassa HOM05D003796 ORTHO05D004486 6.8e-65 250.8 131 97.7
FAN12G1593 Fragaria x ananassa HOM05D003796 ORTHO05D004486 2.8e-63 245.4 143 90.9
RcHm_v2.0_Chr4g0406061 Rosa chinensis HOM05D003796 ORTHO05D004486 2.9e-55 218.8 149 76.5
Prupe.1G586900 Prunus persica HOM05D003796 ORTHO05D004486 1.1e-38 163.7 145 62.1
MD08G1249800 Malus domestica HOM05D003796 ORTHO05D004486 1.7e-28 129.8 151 55.0
TAR362G0252 Trochodendron aralioides HOM05D003796 ORTHO05D004486 2.0e-24 116.3 152 49.3
Atru.chr4.1395 Acer truncatum HOM05D003796 ORTHO05D004486 2.6e-24 115.9 145 49.0
CiPaw.01G171300 Carya illinoinensis HOM05D003796 ORTHO05D004486 7.6e-24 114.4 154 47.4
CsaV3_6G007010 Cucumis sativus L. HOM05D003796 ORTHO05D004486 1.3e-23 113.6 153 46.4
Cpa.g.sc9.357 Carica papaya HOM05D003796 ORTHO05D004486 2.2e-23 112.8 125 48.8
Lsat_1_v5_gn_3_110880 Lactuca sativa HOM05D003796 ORTHO05D004486 2.2e-23 112.8 153 43.8
ECA240G0037 Erigeron canadensis HOM05D003796 ORTHO05D004486 3.8e-23 112.1 150 44.0
QL10p054554 Quercus lobata HOM05D003796 ORTHO05D004486 6.4e-23 111.3 145 46.2
MELO3C022427.2 Cucumis melo HOM05D003796 ORTHO05D004486 8.4e-23 110.9 97 58.8
Oeu021569.1 Olea europaea HOM05D003796 ORTHO05D004486 8.4e-23 110.9 133 48.1
QL93p1902_0792 Quercus lobata HOM05D003796 ORTHO05D004486 1.1e-22 110.5 86 64.0
CAN.G1432.20 Capsicum annuum HOM05D003796 ORTHO05D004486 1.4e-22 110.2 149 45.6
Sabra13G0104400 Salix brachista HOM05D003796 ORTHO05D004486 1.9e-22 109.8 78 70.5
Potri.013G125600 Populus trichocarpa HOM05D003796 ORTHO05D004486 2.4e-22 109.4 107 57.9
GSVIVG01038135001 Vitis vinifera HOM05D003796 ORTHO05D004486 3.2e-22 109.0 125 50.4
TWI63G0811 Tripterygium wilfordii HOM05D003796 ORTHO05D004486 4.2e-22 108.6 146 44.5
QL10p054570 Quercus lobata HOM05D003796 ORTHO05D004486 9.3e-22 107.5 86 62.8
Hma1.2p1_0150F.1_g066730 Hydrangea macrophylla HOM05D003796 ORTHO05D004486 2.7e-21 105.9 89 60.7
Sed0014142 Sechium edule HOM05D003796 ORTHO05D004486 4.6e-21 105.1 112 54.5
Nn7g37675 Nelumbo nucifera HOM05D003796 ORTHO05D004486 7.8e-21 104.4 89 61.8
Migut.N03072 Erythranthe guttata HOM05D003796 ORTHO05D004486 1.0e-20 104.0 95 57.9
Ciclev10021832m.g Citrus clementina HOM05D003796 ORTHO05D004486 1.3e-20 103.6 151 44.4
MSTRG.22023 Avicennia marina HOM05D003796 ORTHO05D004486 1.7e-20 103.2 83 61.4
HanXRQChr13g0418501 Helianthus annuus HOM05D003796 ORTHO05D004486 1.7e-20 103.2 122 46.7
MBI08_g25562_MAGBIO Magnolia biondii HOM05D003796 ORTHO05D004486 1.7e-20 103.2 105 55.2
PGR042G0542 Punica granatum HOM05D003796 ORTHO05D004486 1.7e-20 103.2 85 63.5
Gohir.A05G327600 Gossypium hirsutum HOM05D003796 ORTHO05D004486 3.9e-20 102.1 83 65.1
Gohir.D05G328000 Gossypium hirsutum HOM05D003796 ORTHO05D004486 3.9e-20 102.1 83 65.1
Dinv33197 Davidia involucrata HOM05D003796 ORTHO05D004486 8.7e-20 100.9 155 44.5
Glyma.12G048900 Glycine max HOM05D003796 ORTHO05D004486 1.5e-19 100.1 133 47.4
Gorai.009G351700 Gossypium raimondii HOM05D003796 ORTHO05D004486 1.5e-19 100.1 77 68.8
CANSAT35G0237 Cannabis sativa HOM05D003796 ORTHO05D004486 1.9e-19 99.8 152 44.1
Duzib268G1213 Durio zibethinus HOM05D003796 ORTHO05D004486 1.9e-19 99.8 114 53.5
Solyc06g074890.1 Solanum lycopersicum HOM05D003796 ORTHO05D004486 3.3e-19 99.0 95 56.8
Sopen06g031300 Solanum pennellii HOM05D003796 ORTHO05D004486 7.3e-19 97.8 95 55.8
PGSC0003DMG401007138 Solanum tuberosum HOM05D003796 ORTHO05D004486 9.6e-19 97.4 84 58.3
CDE04G0900 Ceratophyllum demersum HOM05D003796 ORTHO05D004486 1.3e-18 97.1 83 62.7
Nitab4.5_0007977g0020 Nicotiana tabacum HOM05D003796 ORTHO05D004486 1.3e-18 97.1 102 55.9
VMungo1127G1870 Vigna mungo HOM05D003796 ORTHO05D004486 2.1e-18 96.3 85 58.8
Actinidia28983 Actinidia chinensis HOM05D003796 ORTHO05D004486 4.8e-18 95.1 119 46.2
Aqoxy2G01069 Aquilegia oxysepala HOM05D003796 ORTHO05D004486 6.2e-18 94.7 145 42.1
Cc06_g21590 Coffea canephora HOM05D003796 ORTHO05D004486 6.2e-18 94.7 76 64.5
SGA_v2.0_scaffold25G10998 Striga asiatica HOM05D003796 ORTHO05D004486 1.1e-17 94.0 97 52.6
Phvul.011G051000 Phaseolus vulgaris HOM05D003796 ORTHO05D004486 1.4e-17 93.6 126 46.0
Manes.11G130100 Manihot esculenta HOM05D003796 ORTHO05D004486 3.1e-17 92.4 83 54.2
EL10Ac3g06067 Beta vulgaris HOM05D003796 ORTHO05D004486 4.0e-17 92.0 108 49.1
ATR0075G004 Amborella trichopoda HOM05D003796 ORTHO05D004486 5.3e-17 91.7 90 51.1
Ah.13g073570 Amaranthus hybridus HOM05D003796 ORTHO05D004486 6.9e-17 91.3 77 58.4
Peaxi162Scf00568g00527 Petunia axillaris HOM05D003796 ORTHO05D004486 9.0e-17 90.9 95 55.8
Lj3g0002298 Lotus japonicus HOM05D003796 ORTHO05D004486 2.0e-16 89.7 89 52.8
TPR.G10226 Trifolium pratense HOM05D003796 ORTHO05D004486 2.0e-16 89.7 113 47.8
TWI63G1493 Tripterygium wilfordii HOM05D003796 ORTHO05D004486 2.0e-16 89.7 103 50.5
Medtr4g068280 Medicago truncatula HOM05D003796 ORTHO05D004486 5.8e-16 88.2 85 56.5
PSO832G1541 Papaver somniferum HOM05D003796 ORTHO05D004486 5.8e-16 88.2 147 39.5
Sopen06g031310 Solanum pennellii HOM05D003796 ORTHO05D004486 5.8e-16 88.2 83 56.6
Lalb_Chr19g0138481 Lupinus albus HOM05D003796 ORTHO05D004486 1.3e-15 87.0 135 42.2
Solyc06g074900.3 Solanum lycopersicum HOM05D003796 ORTHO05D004486 1.3e-15 87.0 106 50.0
AUR62002376 Chenopodium quinoa HOM05D003796 ORTHO05D004486 2.9e-15 85.9 106 46.2
CAN.G1001.53 Capsicum annuum HOM05D003796 ORTHO05D004486 4.9e-15 85.1 140 40.0
AUR62023807 Chenopodium quinoa HOM05D003796 ORTHO05D004486 4.9e-15 85.1 90 50.0
Ca_20812_v3 Cicer arietinum L. HOM05D003796 ORTHO05D004486 1.4e-14 83.6 114 42.1
PGSC0003DMG402007138 Solanum tuberosum HOM05D003796 ORTHO05D004486 1.9e-14 83.2 83 53.0
arahy.Tifrunner.gnm1.ann1.P7R60W Arachis hypogaea HOM05D003796 ORTHO05D004486 2.4e-14 82.8 79 57.0
PSO210G4043 Papaver somniferum HOM05D003796 ORTHO05D004486 3.2e-14 82.4 148 37.8
Os01g0894700 Oryza sativa ssp. japonica HOM05D003796 ORTHO05D004486 4.2e-14 82.0 87 50.6
RcHm_v2.0_Chr5g0044351 Rosa chinensis HOM05D003796 ORTHO05D004486 4.6e-13 78.6 141 39.0
CBR_g31497 Chara braunii HOM05D003796 ORTHO05D004486 3.0e-12 75.9 71 46.5
Zm00001eb144880 Zea mays HOM05D003796 ORTHO05D004486 5.1e-12 75.1 94 45.7
SEGI_15351 Sequoiadendron giganteum HOM05D003796 ORTHO05D004486 8.7e-12 74.3 81 49.4
AagrBONN_evm.TU.Sc2ySwM_117.3751 Anthoceros agrestis HOM05D003796 ORTHO05D004486 1.9e-11 73.2 102 41.2
arahy.Tifrunner.gnm1.ann1.I4880T Arachis hypogaea HOM05D003796 ORTHO05D004486 1.9e-11 73.2 97 47.4
FAN21G0866 Fragaria x ananassa HOM05D003796 ORTHO05D004486 4.8e-10 68.6 137 34.3
FvH4_3g24770 Fragaria vesca HOM05D003796 ORTHO05D004486 6.2e-10 68.2 131 35.1
Sc19g0002760 Simmondsia chinensis HOM05D003796 ORTHO05D004486 8.1e-10 67.8 51 60.8
Hund03191 Selenicereus undatus HOM05D003796 ORTHO05D004486 1.4e-09 67.0 81 46.9
Pp3c14_20300 Physcomitrium patens HOM05D003796 ORTHO05D004486 4.5e-08 62.0 75 41.3
Psat7g207840 Pisum sativum HOM05D003796 ORTHO05D004486 4.5e-08 62.0 47 57.4
Sp4g13210 Schrenkiella parvula HOM05D003796 ORTHO05D004486 2.2e-07 59.7 83 39.8
Cpa.g.sc9.356 Carica papaya HOM05D003796 ORTHO05D004486 4.9e-07 58.5 83 34.9
AT2G30695 Arabidopsis thaliana HOM05D003796 ORTHO05D004486 8.4e-07 57.8 101 36.6
CARHR124190 Cardamine hirsuta HOM05D003796 ORTHO05D004486 1.1e-06 57.4 101 37.6
AL4G25590 Arabidopsis lyrata HOM05D003796 ORTHO05D004486 1.4e-06 57.0 101 35.6
BraA04t17867Z Brassica rapa HOM05D003796 ORTHO05D004486 1.4e-06 57.0 83 41.0
BolC4t27478H Brassica oleracea HOM05D003796 ORTHO05D004486 1.9e-06 56.6 85 42.4
Carub.0004s1187 Capsella rubella HOM05D003796 ORTHO05D004486 1.9e-06 56.6 101 35.6
C04p59700 Brassica napus HOM05D003796 ORTHO05D004486 2.4e-06 56.2 85 42.4
Eucgr.A00011 Eucalyptus grandis HOM05D003796 ORTHO05D004486 3.2e-06 55.8 76 39.5
Eucgr.A00012 Eucalyptus grandis HOM05D003796 ORTHO05D004486 4.2e-06 55.5 86 38.4
CDE09G0312 Ceratophyllum demersum HOM05D003796 ORTHO05D004486 5.5e-06 55.1 59 42.4
Eucgr.G00294 Eucalyptus grandis HOM05D003796 ORTHO05D004486 9.3e-06 54.3 76 39.5
Glyma.04G117800 Glycine max HOM05D003796 ORTHO05D004486 9.3e-06 54.3 58 39.7
VMungo1080G1154 Vigna mungo HOM05D003796 ORTHO05D004486 9.3e-06 54.3 58 41.4


User provided reference genes

Program Settings