Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1916 Fragaria x ananassa HOM05D008037 ORTHO05D004271 6.0e-117 424.1 201 100.0
FAN26G0971 Fragaria x ananassa HOM05D008037 ORTHO05D004271 1.8e-57 226.5 117 91.5
COL.COLO4_33462 Corchorus olitorius HOM05D008016 ORTHO05D004271 7.0e-49 198.0 165 66.7
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 8.6e-39 164.5 160 60.0
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 4.7e-37 158.7 173 54.9
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 1.3e-31 140.6 173 50.3
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 3.9e-31 139.0 140 57.9
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 3.9e-31 139.0 140 57.9
Oeu040617.1 Olea europaea HOM05D008016 ORTHO05D004271 8.6e-31 137.9 71 91.5
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 9.5e-30 134.4 136 58.1
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.2e-29 134.0 80 82.5
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 1.6e-29 133.7 79 84.8
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 2.1e-29 133.3 140 55.7
arahy.Tifrunner.gnm1.ann1.WFJR7S Arachis hypogaea HOM05D008037 ORTHO05D004271 3.1e-28 129.4 125 58.4
arahy.Tifrunner.gnm1.ann1.KJ09M7 Arachis hypogaea HOM05D008037 ORTHO05D004271 8.9e-28 127.9 119 60.5
RcHm_v2.0_Chr2g0095251 Rosa chinensis HOM05D008016 ORTHO05D004271 9.9e-27 124.4 63 92.1
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 1.3e-26 124.0 125 54.4
Gohir.D07G151450 Gossypium hirsutum HOM05D008016 ORTHO05D004271 2.9e-26 122.9 109 62.4
vmacro22395 Vaccinium macrocarpon HOM05D008016 ORTHO05D004271 5.4e-25 118.6 64 90.6
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 4.6e-24 115.5 106 59.4
vmacro22420 Vaccinium macrocarpon HOM05D008016 ORTHO05D010055 4.6e-24 115.5 80 75.0
Sed0006095 Sechium edule HOM05D010190 ORTHO05D010055 9.6e-22 107.8 82 74.4
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 3.1e-20 102.8 158 46.8
BolSC29t60497H Brassica oleracea HOM05D008016 ORTHO05D010588 4.0e-20 102.4 148 47.3
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 2.0e-19 100.1 114 52.6
Nitab4.5_0000066g0170 Nicotiana tabacum HOM05D008037 ORTHO05D004271 5.8e-19 98.6 46 95.7
ClCG11G009640 Citrullus lanatus HOM05D008354 ORTHO05D010055 9.9e-19 97.8 47 91.5
arahy.Tifrunner.gnm1.ann1.54SFA9 Arachis hypogaea HOM05D008037 ORTHO05D004271 2.9e-18 96.3 144 48.6
Nitab4.5_0012234g0010 Nicotiana tabacum HOM05D008037 ORTHO05D004271 8.4e-18 94.7 46 91.3
Lsat_1_v5_gn_2_98441 Lactuca sativa HOM05D008016 ORTHO05D004271 4.2e-17 92.4 45 91.1
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 9.6e-14 81.3 39 94.9
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 1.3e-13 80.9 111 42.3
C04p22520 Brassica napus HOM05D008016 ORTHO05D004271 4.8e-13 79.0 56 76.8
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 4.8e-13 79.0 63 69.8
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 4.8e-13 79.0 63 69.8
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 4.8e-13 79.0 63 69.8
BolSC29t60557H Brassica oleracea HOM05D008016 ORTHO05D010588 3.1e-12 76.3 58 74.1
BolSC35t60714H Brassica oleracea HOM05D008016 ORTHO05D004271 3.1e-12 76.3 58 74.1
BolSC45t60920H Brassica oleracea HOM05D008016 ORTHO05D010588 3.1e-12 76.3 58 74.1
BolSC46t60968H Brassica oleracea HOM05D008016 ORTHO05D010588 3.1e-12 76.3 58 74.1
BraSC103t45418Z Brassica rapa HOM05D008016 ORTHO05D010588 3.1e-12 76.3 58 74.1
BraSC103t45496Z Brassica rapa HOM05D008016 ORTHO05D004271 3.1e-12 76.3 58 74.1
BraSC25t45901Z Brassica rapa HOM05D008016 ORTHO05D010588 3.1e-12 76.3 58 74.1
BraSC25t45922Z Brassica rapa HOM05D008016 ORTHO05D010588 3.1e-12 76.3 58 74.1
BolSC49t61153H Brassica oleracea HOM05D008016 ORTHO05D010588 5.3e-12 75.5 43 90.7
MD03G1269900 Malus domestica HOM05D008037 ORTHO05D004271 1.2e-11 74.3 52 75.0
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 3.4e-11 72.8 36 86.1
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 3.4e-11 72.8 36 86.1
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 7.6e-11 71.6 32 96.9
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 9.9e-11 71.2 32 96.9
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 1.3e-10 70.9 36 83.3
Potri.008G221801 Populus trichocarpa HOM05D008037 ORTHO05D004271 1.3e-10 70.9 32 93.8
Solyc09g011150.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 1.3e-10 70.9 41 78.0
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.7e-10 70.5 46 69.6
Solyc12g099150.1 Solanum lycopersicum HOM05D008016 ORTHO05D004271 2.2e-10 70.1 66 60.6
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 2.9e-10 69.7 33 90.9
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 2.9e-10 69.7 36 80.6
CDE02G0533 Ceratophyllum demersum HOM05D008037 ORTHO05D004271 3.8e-10 69.3 32 93.8
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 4.9e-10 68.9 33 93.9
Solyc00g500344.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 8.4e-10 68.2 31 96.8
arahy.Tifrunner.gnm1.ann1.XGYT8C Arachis hypogaea HOM05D008037 ORTHO05D004271 1.1e-09 67.8 32 90.6
Solyc04g082990.3 Solanum lycopersicum HOM05D005978 ORTHO05D004271 1.1e-09 67.8 33 90.9
Nitab4.5_0001727g0130 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.4e-09 66.6 31 93.5
arahy.Tifrunner.gnm1.ann1.61DFKT Arachis hypogaea HOM05D008037 ORTHO05D004271 3.2e-09 66.2 32 84.4
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.2e-09 66.2 31 90.3
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 3.2e-09 66.2 32 90.6
EL10Ac6g14592 Beta vulgaris HOM05D008354 ORTHO05D010055 4.2e-09 65.9 37 89.2
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 5.4e-09 65.5 32 90.6
Nitab4.5_0005831g0120 Nicotiana tabacum HOM05D008354 ORTHO05D010055 5.4e-09 65.5 63 55.6
Glyma.15G274900 Glycine max HOM05D008016 ORTHO05D004271 3.5e-08 62.8 46 63.0
Gohir.A13G086605 Gossypium hirsutum HOM05D008016 ORTHO05D004271 3.5e-08 62.8 46 65.2
BolSC35t60682H Brassica oleracea HOM05D008016 ORTHO05D010588 4.6e-08 62.4 64 54.7
Peaxi162Scf00210g00153 Petunia axillaris HOM05D008037 ORTHO05D004271 4.6e-08 62.4 32 84.4
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 4.6e-08 62.4 32 84.4
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 6.0e-08 62.0 30 90.0
Nitab4.5_0027992g0040 Nicotiana tabacum HOM05D008037 ORTHO05D004271 6.0e-08 62.0 32 84.4
Hund25912 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund27633 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund27757 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund27833 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund28332 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund28440 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund28538 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund28614 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund28956 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund28981 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29028 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29091 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29181 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29249 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29256 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29263 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29290 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29318 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29436 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29853 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund30002 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund30263 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund30448 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund30632 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
Hund30993 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.3e-07 60.8 31 87.1
EL10As10g23963 Beta vulgaris HOM05D008037 ORTHO05D004271 2.3e-07 60.1 30 90.0
Nitab4.5_0004841g0080 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.0e-07 59.7 31 87.1
vmacro12501 Vaccinium macrocarpon HOM05D001824 ORTHO05D010055 3.0e-07 59.7 27 92.6
Zm00001eb129280 Zea mays HOM05D034373 ORTHO05D021180 5.1e-07 58.9 54 59.3
arahy.Tifrunner.gnm1.ann1.M1FG7L Arachis hypogaea HOM05D008354 ORTHO05D010055 1.1e-06 57.8 29 86.2
EL10Ac5g11360 Beta vulgaris HOM05D008037 ORTHO05D004271 1.1e-06 57.8 51 56.9
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 1.9e-06 57.0 70 50.0
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 1.9e-06 57.0 70 50.0
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.5e-06 56.6 31 80.6
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 3.3e-06 56.2 30 80.0
Migut.A01208 Erythranthe guttata HOM05D008016 ORTHO05D004271 3.3e-06 56.2 47 59.6
Nitab4.5_0000002g0310 Nicotiana tabacum HOM05D010190 ORTHO05D004271 3.3e-06 56.2 28 85.7
Sc02g0004570 Simmondsia chinensis HOM05D008037 ORTHO05D004271 4.3e-06 55.8 30 83.3
Gohir.1Z049580 Gossypium hirsutum HOM05D008016 ORTHO05D004271 5.6e-06 55.5 91 42.9
Gohir.A02G134102 Gossypium hirsutum HOM05D008016 ORTHO05D004271 7.4e-06 55.1 46 63.0


User provided reference genes

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