Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.6e-103 379.4 184 100.0
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 6.6e-102 374.0 182 98.4
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 8.6e-102 373.6 182 97.8
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 4.4e-98 361.3 184 94.6
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 6.1e-92 340.9 184 88.0
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 2.6e-90 335.5 184 87.0
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 2.3e-86 322.4 183 81.4
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 2.5e-85 318.9 181 80.7
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 3.3e-85 318.5 184 78.8
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 7.3e-85 317.4 184 77.2
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 9.5e-85 317.0 182 82.4
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 1.6e-84 316.2 186 79.6
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 1.6e-84 316.2 184 79.3
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 3.6e-84 315.1 184 81.0
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 8.0e-84 313.9 184 77.7
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 1.1e-83 313.5 184 79.3
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 1.8e-83 312.8 184 78.3
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 5.2e-83 311.2 182 78.6
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 6.8e-83 310.8 184 77.2
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 8.9e-83 310.5 181 77.9
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 3.4e-82 308.5 182 75.8
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 3.4e-82 308.5 182 75.8
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 5.8e-82 307.8 182 75.8
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 7.5e-82 307.4 182 75.8
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 9.8e-82 307.0 182 78.6
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 2.2e-81 305.8 182 78.6
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 2.2e-81 305.8 181 76.8
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 2.9e-81 305.4 184 75.0
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 2.9e-81 305.4 182 76.4
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 8.3e-81 303.9 181 75.7
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 1.4e-80 303.1 182 75.3
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 4.1e-80 301.6 181 74.0
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 5.4e-80 301.2 182 74.2
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 7.1e-80 300.8 182 74.7
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 2.7e-79 298.9 181 74.0
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 2.7e-79 298.9 184 74.5
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 3.5e-79 298.5 185 77.8
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 6.0e-79 297.7 182 73.1
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 1.3e-78 296.6 182 73.6
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 1.7e-78 296.2 182 73.6
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 3.0e-78 295.4 184 73.4
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 3.9e-78 295.0 182 74.7
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 5.1e-78 294.7 182 74.2
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 6.6e-78 294.3 181 74.6
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 6.6e-78 294.3 181 74.6
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 6.6e-78 294.3 181 74.6
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 6.6e-78 294.3 182 74.7
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 8.6e-78 293.9 184 73.4
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 1.9e-77 292.7 182 73.6
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 1.9e-77 292.7 182 70.9
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 3.3e-77 292.0 183 72.7
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 4.3e-77 291.6 182 73.1
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 4.3e-77 291.6 181 71.8
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 5.6e-77 291.2 182 74.2
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 9.5e-77 290.4 183 73.2
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 1.2e-76 290.0 178 76.4
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 1.6e-76 289.7 182 71.4
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 1.6e-76 289.7 182 73.6
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 2.1e-76 289.3 182 72.5
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 2.1e-76 289.3 182 70.9
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 2.1e-76 289.3 181 72.4
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 2.8e-76 288.9 182 73.1
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 3.6e-76 288.5 181 71.8
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 3.6e-76 288.5 184 71.7
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 6.2e-76 287.7 178 74.7
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 8.1e-76 287.3 182 72.0
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 1.8e-75 286.2 178 75.8
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 1.8e-75 286.2 184 71.2
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 2.3e-75 285.8 177 71.2
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 2.3e-75 285.8 183 72.1
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 3.1e-75 285.4 177 71.2
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 5.2e-75 284.6 182 70.9
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 2.0e-74 282.7 177 71.2
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 2.0e-74 282.7 184 70.7
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 9.9e-74 280.4 185 71.4
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 2.9e-73 278.9 182 68.7
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 3.7e-73 278.5 185 70.8
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 3.7e-73 278.5 182 69.8
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 9.2e-72 273.9 180 70.0
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 1.6e-71 273.1 155 80.6
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 2.3e-70 269.2 184 66.8
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 3.9e-70 268.5 177 67.8
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 1.5e-69 266.5 211 59.2
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 2.5e-69 265.8 184 65.2
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 3.3e-69 265.4 184 69.6
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 3.3e-69 265.4 164 71.3
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 4.3e-69 265.0 149 81.9
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 2.1e-68 262.7 170 71.8
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 2.4e-67 259.2 182 64.8
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 3.1e-67 258.8 155 74.2
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 9.9e-66 253.8 159 73.6
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 2.9e-65 252.3 182 63.7
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 1.7e-62 243.0 186 61.8
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 6.6e-62 241.1 178 62.9
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.5e-58 229.9 183 59.6
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.5e-58 229.9 183 59.6
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 3.4e-58 228.8 181 59.1
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 5.8e-58 228.0 182 61.0
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 3.8e-57 225.3 143 69.9
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 3.8e-57 225.3 143 69.9
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 1.9e-56 223.0 185 58.9
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 1.6e-52 209.9 182 57.1
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 1.5e-50 203.4 131 68.7
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 3.8e-49 198.7 131 67.9
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 1.5e-45 186.8 180 49.4
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 1.1e-43 180.6 176 48.3
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 4.0e-43 178.7 131 64.1
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 4.5e-34 148.7 144 49.3
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 6.5e-33 144.8 91 79.1
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 4.5e-26 122.1 131 46.6
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 1.4e-16 90.5 45 88.9
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 3.9e-14 82.4 179 33.5
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 5.1e-14 82.0 184 34.2
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 1.4e-11 73.9 193 31.1


User provided reference genes

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