Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1715 Fragaria x ananassa HOM05D003602 ORTHO05D020334 7.4e-147 523.9 265 100.0
FAN17G1901 Fragaria x ananassa HOM05D003602 ORTHO05D020334 9.6e-46 188.0 99 97.0
RcHm_v2.0_Chr1g0360031 Rosa chinensis HOM05D003602 ORTHO05D004808 3.4e-43 179.5 128 72.7
Prupe.2G190300 Prunus persica HOM05D003602 ORTHO05D004808 3.8e-42 176.0 128 69.5
FvH4_7g16830 Fragaria vesca HOM05D003602 ORTHO05D004808 2.4e-41 173.3 127 71.7
FAN06G4341 Fragaria x ananassa HOM05D003602 ORTHO05D004808 2.4e-41 173.3 127 71.7
FAN10G2704 Fragaria x ananassa HOM05D003602 ORTHO05D004808 2.4e-41 173.3 127 71.7
FAN10G3025 Fragaria x ananassa HOM05D003602 ORTHO05D004808 2.4e-41 173.3 127 71.7
FAN06G1715 Fragaria x ananassa HOM05D003602 ORTHO05D004808 3.2e-41 172.9 127 70.9
FAN01G1925 Fragaria x ananassa HOM05D003602 ORTHO05D004808 4.2e-41 172.6 127 71.7
FAN03G2718 Fragaria x ananassa HOM05D003602 ORTHO05D004808 2.1e-40 170.2 127 69.3
MD01G1083100 Malus domestica HOM05D003602 ORTHO05D004808 1.3e-39 167.5 127 66.9
Haze_15672 Corylus avellana HOM05D003602 ORTHO05D004808 3.4e-35 152.9 128 60.9
Cfa003788 Carpinus fangiana HOM05D003602 ORTHO05D004808 2.2e-34 150.2 128 59.4
CiPaw.01G077200 Carya illinoinensis HOM05D003602 ORTHO05D004808 2.2e-34 150.2 128 59.4
Cpa.g.sc18.79 Carica papaya HOM05D003602 ORTHO05D004808 8.4e-34 148.3 128 58.6
Duzib138G1559 Durio zibethinus HOM05D003602 ORTHO05D004808 8.4e-34 148.3 128 58.6
MELO3C006015.2 Cucumis melo HOM05D003602 ORTHO05D004808 1.1e-33 147.9 128 57.0
CsaV3_3G007970 Cucumis sativus L. HOM05D003602 ORTHO05D004808 1.4e-33 147.5 128 56.2
Lalb_Chr17g0342751 Lupinus albus HOM05D003602 ORTHO05D004808 1.4e-33 147.5 128 57.0
Sed0018077 Sechium edule HOM05D003602 ORTHO05D004808 1.4e-33 147.5 128 57.0
Gohir.A07G137000 Gossypium hirsutum HOM05D003602 ORTHO05D004808 2.5e-33 146.7 128 58.6
Sed0022447 Sechium edule HOM05D003602 ORTHO05D004808 3.2e-33 146.4 128 57.0
Thecc.01G340800 Theobroma cacao HOM05D003602 ORTHO05D004808 3.2e-33 146.4 128 57.8
CANSAT56G2221 Cannabis sativa HOM05D003602 ORTHO05D004808 4.2e-33 146.0 127 57.5
Gohir.D07G142200 Gossypium hirsutum HOM05D003602 ORTHO05D004808 7.1e-33 145.2 128 58.6
Gorai.001G154000 Gossypium raimondii HOM05D003602 ORTHO05D004808 7.1e-33 145.2 128 58.6
QL08p045638 Quercus lobata HOM05D003602 ORTHO05D004808 9.3e-33 144.8 131 59.5
TWI59G0599 Tripterygium wilfordii HOM05D003602 ORTHO05D004808 9.3e-33 144.8 128 55.5
Manes.01G245400 Manihot esculenta HOM05D003602 ORTHO05D004808 1.2e-32 144.4 128 57.0
ClCG05G000750 Citrullus lanatus HOM05D003602 ORTHO05D004808 2.1e-32 143.7 128 55.5
Phvul.006G114200 Phaseolus vulgaris HOM05D003602 ORTHO05D004808 2.1e-32 143.7 128 53.9
arahy.Tifrunner.gnm1.ann1.M38EY0 Arachis hypogaea HOM05D003602 ORTHO05D004808 2.7e-32 143.3 128 55.5
Ciclev10018709m.g Citrus clementina HOM05D003602 ORTHO05D004808 2.7e-32 143.3 128 56.2
Lalb_Chr04g0254381 Lupinus albus HOM05D003602 ORTHO05D004808 2.7e-32 143.3 128 56.2
arahy.Tifrunner.gnm1.ann1.100NT6 Arachis hypogaea HOM05D003602 ORTHO05D004808 3.5e-32 142.9 128 55.5
Hma1.2p1_0390F.1_g142640 Hydrangea macrophylla HOM05D003602 ORTHO05D004808 3.5e-32 142.9 128 56.2
Lj3g0012795 Lotus japonicus HOM05D003602 ORTHO05D004808 4.6e-32 142.5 128 54.7
TAR371G1016 Trochodendron aralioides HOM05D003602 ORTHO05D004808 4.6e-32 142.5 128 57.8
QL11p045606 Quercus lobata HOM05D003602 ORTHO05D004808 7.9e-32 141.7 131 58.8
DCAR_008665 Daucus carota HOM05D003602 ORTHO05D004808 1.0e-31 141.4 128 54.7
Lj7P499T29 Lonicera japonica HOM05D003602 ORTHO05D004808 2.3e-31 140.2 128 57.0
Actinidia17298 Actinidia chinensis HOM05D003602 ORTHO05D004808 3.0e-31 139.8 128 53.9
Duzib133G0673 Durio zibethinus HOM05D003602 ORTHO05D004808 3.0e-31 139.8 128 55.5
THA.LOC104817368 Tarenaya hassleriana HOM05D003602 ORTHO05D004808 3.0e-31 139.8 128 54.7
Manes.05G021800 Manihot esculenta HOM05D003602 ORTHO05D004808 3.9e-31 139.4 128 56.2
Aqoxy7G00067 Aquilegia oxysepala HOM05D003602 ORTHO05D004808 5.1e-31 139.0 126 54.8
vmacro07844 Vaccinium macrocarpon HOM05D003602 ORTHO05D004808 5.1e-31 139.0 128 54.7
CSS0032390 Camellia sinensis var. sinensis HOM05D003602 ORTHO05D004808 8.7e-31 138.3 128 53.1
VMungo0540G0209 Vigna mungo HOM05D003602 ORTHO05D004808 1.1e-30 137.9 128 51.6
COL.COLO4_06273 Corchorus olitorius HOM05D003602 ORTHO05D004808 2.5e-30 136.7 128 57.0
Ca_23524_v3 Cicer arietinum L. HOM05D003602 ORTHO05D004808 3.3e-30 136.3 128 54.7
Eucgr.D02383 Eucalyptus grandis HOM05D003602 ORTHO05D004808 3.3e-30 136.3 128 53.1
Phvul.006G114111 Phaseolus vulgaris HOM05D003602 ORTHO05D004808 3.3e-30 136.3 128 50.8
VMungo0540G0473 Vigna mungo HOM05D003602 ORTHO05D004808 3.3e-30 136.3 128 50.8
Glyma.07G054900 Glycine max HOM05D003602 ORTHO05D004808 4.3e-30 136.0 128 53.1
PSO135G0828 Papaver somniferum HOM05D003602 ORTHO05D004808 4.3e-30 136.0 127 54.3
Glyma.16G023700 Glycine max HOM05D003602 ORTHO05D004808 7.4e-30 135.2 128 53.1
PGR042G2389 Punica granatum HOM05D003602 ORTHO05D004808 7.4e-30 135.2 127 54.3
Nn1g00272 Nelumbo nucifera HOM05D003602 ORTHO05D004808 1.3e-29 134.4 127 54.3
ATR0605G321 Amborella trichopoda HOM05D003602 ORTHO05D004808 1.6e-29 134.0 127 52.8
AL4G45940 Arabidopsis lyrata HOM05D003602 ORTHO05D004808 1.6e-29 134.0 128 53.1
AT2G46520 Arabidopsis thaliana HOM05D003602 ORTHO05D004808 1.6e-29 134.0 128 52.3
PSO384G3294 Papaver somniferum HOM05D003602 ORTHO05D004808 1.6e-29 134.0 127 53.5
Potri.002G172700 Populus trichocarpa HOM05D003602 ORTHO05D004808 2.1e-29 133.7 127 53.5
CARHR141850 Cardamine hirsuta HOM05D003602 ORTHO05D004808 2.8e-29 133.3 132 50.8
Aa31LG1G27870 Aethionema arabicum HOM05D003602 ORTHO05D004808 3.7e-29 132.9 128 53.1
Carub.0004s2923 Capsella rubella HOM05D003602 ORTHO05D004808 3.7e-29 132.9 128 51.6
Dinv34217 Davidia involucrata HOM05D003602 ORTHO05D004808 3.7e-29 132.9 128 54.7
Sabra14G0073400 Salix brachista HOM05D003602 ORTHO05D004808 8.2e-29 131.7 128 52.3
Potri.014G100000 Populus trichocarpa HOM05D003602 ORTHO05D004808 1.1e-28 131.3 128 52.3
Rhsim03G0025100 Rhododendron simsii HOM05D003602 ORTHO05D004808 1.1e-28 131.3 128 51.6
Sabra02G0140500 Salix brachista HOM05D003602 ORTHO05D004808 1.1e-28 131.3 127 52.0
HanXRQChr04g0120491 Helianthus annuus HOM05D003602 ORTHO05D004808 1.4e-28 131.0 127 52.0
Thhalv10001293m.g Eutrema salsugineum HOM05D003602 ORTHO05D004808 1.8e-28 130.6 128 52.3
MSTRG.17352 Avicennia marina HOM05D003602 ORTHO05D004808 2.4e-28 130.2 125 52.8
Cc02_g39500 Coffea canephora HOM05D003602 ORTHO05D004808 5.3e-28 129.0 125 52.0
Medtr8g027450 Medicago truncatula HOM05D003602 ORTHO05D004808 6.9e-28 128.6 128 51.6
Sp4g28560 Schrenkiella parvula HOM05D003602 ORTHO05D004808 1.5e-27 127.5 128 51.6
Oeu007881.3 Olea europaea HOM05D003602 ORTHO05D004808 4.5e-27 125.9 125 52.0
SGA_v2.0_scaffold22G09976 Striga asiatica HOM05D003602 ORTHO05D004808 4.5e-27 125.9 125 49.6
Dinv32601 Davidia involucrata HOM05D003602 ORTHO05D004808 5.8e-27 125.6 108 59.3
BcaC02g12682 Brassica carinata HOM05D003602 ORTHO05D004808 1.0e-26 124.8 128 52.3
CARHR193560 Cardamine hirsuta HOM05D003602 ORTHO05D004808 1.0e-26 124.8 128 51.6
Migut.N01537 Erythranthe guttata HOM05D003602 ORTHO05D004808 1.0e-26 124.8 124 50.8
CAN.G1415.23 Capsicum annuum HOM05D003602 ORTHO05D004808 1.3e-26 124.4 124 49.2
Oeu043228.1 Olea europaea HOM05D003602 ORTHO05D004808 1.3e-26 124.4 125 50.4
PGSC0003DMG401000117 Solanum tuberosum HOM05D003602 ORTHO05D004808 1.3e-26 124.4 125 49.6
SGA_v2.0_scaffold22G09979 Striga asiatica HOM05D003602 ORTHO05D004808 1.3e-26 124.4 125 48.8
TPR.G20226 Trifolium pratense HOM05D003602 ORTHO05D004808 1.3e-26 124.4 128 50.0
Peaxi162Scf00345g00023 Petunia axillaris HOM05D003602 ORTHO05D004808 1.7e-26 124.0 125 49.6
Solyc01g096060.4 Solanum lycopersicum HOM05D003602 ORTHO05D004808 1.7e-26 124.0 125 48.8
Sopen01g039780 Solanum pennellii HOM05D003602 ORTHO05D004808 1.7e-26 124.0 125 48.8
HPP92_002938 Vanilla planifolia HOM05D003602 ORTHO05D004808 1.7e-26 124.0 128 51.6
ECA236G0047 Erigeron canadensis HOM05D003602 ORTHO05D004808 2.9e-26 123.2 130 50.0
A05p01280 Brassica napus HOM05D003602 ORTHO05D004808 3.8e-26 122.9 128 50.0
BraA05t19126Z Brassica rapa HOM05D003602 ORTHO05D004808 3.8e-26 122.9 128 50.0
C04p01410 Brassica napus HOM05D003602 ORTHO05D004808 6.5e-26 122.1 128 50.0
BolC4t21795H Brassica oleracea HOM05D003602 ORTHO05D004808 6.5e-26 122.1 128 50.0
Nitab4.5_0001763g0060 Nicotiana tabacum HOM05D003602 ORTHO05D004808 6.5e-26 122.1 125 48.8
SEGI_02600 Sequoiadendron giganteum HOM05D003602 ORTHO05D004808 6.5e-26 122.1 126 46.8
Sc02g0002440 Simmondsia chinensis HOM05D003602 ORTHO05D004808 8.4e-26 121.7 126 50.0
Sc02g0002490 Simmondsia chinensis HOM05D003602 ORTHO05D004808 8.4e-26 121.7 126 50.0
CAN.G1045.28 Capsicum annuum HOM05D003602 ORTHO05D004808 1.1e-25 121.3 125 48.8
Nitab4.5_0002614g0030 Nicotiana tabacum HOM05D003602 ORTHO05D004808 1.1e-25 121.3 125 48.0
Hund27357 Selenicereus undatus HOM05D003602 ORTHO05D004808 1.9e-25 120.6 126 47.6
Lsat_1_v5_gn_7_961 Lactuca sativa HOM05D003602 ORTHO05D004808 3.2e-25 119.8 127 51.2
AUR62020311 Chenopodium quinoa HOM05D003602 ORTHO05D004808 1.2e-24 117.9 126 47.6
SHI11330 Sapria himalayana HOM05D003602 ORTHO05D004808 2.1e-24 117.1 126 47.6
SMO364G0669 Selaginella moellendorffii HOM05D003602 ORTHO05D004808 2.1e-24 117.1 124 47.6
Actinidia39220 Actinidia chinensis HOM05D003602 ORTHO05D004808 2.7e-24 116.7 108 52.8
EL10Ac8g18571 Beta vulgaris HOM05D003602 ORTHO05D004808 3.5e-24 116.3 126 46.0
EL10Ac6g13271 Beta vulgaris HOM05D003602 ORTHO05D004808 7.9e-24 115.2 126 46.8
unitig_736.g22809 Utricularia gibba HOM05D003602 ORTHO05D004808 1.0e-23 114.8 125 51.2
Mapoly0156s0024 Marchantia polymorpha HOM05D003602 ORTHO05D004808 1.3e-23 114.4 127 45.7
BcaC03g13954 Brassica carinata HOM05D003602 ORTHO05D004808 3.0e-23 113.2 129 46.5
Carub.0001s3638 Capsella rubella HOM05D003602 ORTHO05D004808 5.7e-22 109.0 130 50.0
Zm00001eb055080 Zea mays HOM05D003602 ORTHO05D004808 7.4e-22 108.6 131 46.6
Ah.14g081150 Amaranthus hybridus HOM05D003602 ORTHO05D004808 9.7e-22 108.2 126 42.1
Aqoxy4G00207 Aquilegia oxysepala HOM05D003602 ORTHO05D004808 9.7e-22 108.2 111 51.4
FAN12G3619 Fragaria x ananassa HOM05D003602 ORTHO05D020334 9.7e-22 108.2 68 82.4
Os01g0235400 Oryza sativa ssp. japonica HOM05D003602 ORTHO05D004808 9.7e-22 108.2 130 47.7
TAR375G0657 Trochodendron aralioides HOM05D003602 ORTHO05D004808 9.7e-22 108.2 92 55.4
Ah.03g136880 Amaranthus hybridus HOM05D003602 ORTHO05D004808 1.6e-21 107.5 126 42.1
A02p08760 Brassica napus HOM05D003602 ORTHO05D004808 8.2e-21 105.1 128 43.8
Zm00001eb216140 Zea mays HOM05D003602 ORTHO05D004808 8.2e-21 105.1 134 44.0
SalBow3G0266 Salvia bowleyana HOM05D003602 ORTHO05D004808 2.4e-20 103.6 124 45.2
BraA02t05946Z Brassica rapa HOM05D003602 ORTHO05D004808 2.0e-19 100.5 128 43.0
SalBow2G0371 Salvia bowleyana HOM05D003602 ORTHO05D004808 2.6e-19 100.1 125 44.8
ECA247G2319 Erigeron canadensis HOM05D003602 ORTHO05D020334 2.7e-16 90.1 99 44.4
CBR_g50023 Chara braunii HOM05D003602 ORTHO05D004808 2.2e-13 80.5 127 36.2
CARHR195690 Cardamine hirsuta HOM05D003602 ORTHO05D004808 6.3e-13 79.0 129 40.3
Lj9C388T18 Lonicera japonica HOM05D003602 ORTHO05D020334 6.3e-13 79.0 93 47.3
SMO358G0230 Selaginella moellendorffii HOM05D003602 ORTHO05D004808 6.3e-13 79.0 101 42.6
Pp3c16_3270 Physcomitrium patens HOM05D003602 ORTHO05D004808 2.4e-12 77.0 123 37.4
BcaB03g13365 Brassica carinata HOM05D003602 ORTHO05D004808 3.1e-12 76.6 123 40.7
Pp3c27_3380 Physcomitrium patens HOM05D003602 ORTHO05D004808 9.1e-12 75.1 100 40.0
CDE10G0721 Ceratophyllum demersum HOM05D003602 ORTHO05D004808 6.5e-10 68.9 63 55.6
Lsat_1_v5_gn_2_118360 Lactuca sativa HOM05D003602 ORTHO05D020334 4.2e-09 66.2 126 38.1
MCO04G210 Micromonas commoda HOM05D003602 ORTHO05D004808 5.5e-09 65.9 125 33.6
CDE10G0625 Ceratophyllum demersum HOM05D003602 ORTHO05D004808 2.7e-08 63.5 60 51.7
CARHR124510 Cardamine hirsuta HOM05D003602 ORTHO05D020334 1.0e-07 61.6 67 46.3
AagrBONN_evm.TU.Sc2ySwM_368.663 Anthoceros agrestis HOM05D003602 ORTHO05D004808 2.3e-07 60.5 64 48.4


User provided reference genes

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