Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 5.5e-145 517.7 276 100.0
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 1.7e-141 506.1 276 97.1
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.1e-140 501.5 276 96.4
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 7.0e-140 500.7 276 96.4
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 8.0e-136 487.3 275 92.7
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 1.2e-123 446.8 275 83.6
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 7.2e-121 437.6 275 82.2
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 6.8e-119 431.0 274 81.4
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 4.9e-117 424.9 276 79.3
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 3.1e-116 422.2 273 80.2
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 2.7e-115 419.1 273 79.1
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 2.8e-112 409.1 274 77.0
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 1.4e-111 406.8 271 76.8
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 6.8e-111 404.4 273 76.2
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 8.9e-111 404.1 266 76.7
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 5.8e-110 401.4 274 76.3
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 5.8e-110 401.4 266 77.1
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 6.4e-109 397.9 274 74.5
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.8e-108 396.4 273 74.4
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 3.2e-108 395.6 273 74.4
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 4.1e-108 395.2 273 74.7
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 2.7e-107 392.5 275 72.4
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 2.7e-107 392.5 273 74.4
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 2.7e-107 392.5 272 73.9
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 3.5e-107 392.1 275 73.8
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 2.3e-106 389.4 274 71.9
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 3.9e-106 388.7 276 71.7
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 6.6e-106 387.9 275 71.3
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 1.5e-105 386.7 274 73.0
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 4.3e-105 385.2 274 72.6
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 5.6e-105 384.8 266 73.7
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 7.3e-105 384.4 273 71.1
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 9.5e-105 384.0 275 72.4
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 6.2e-104 381.3 274 70.8
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.1e-103 380.6 274 71.5
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 1.8e-103 379.8 272 72.1
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 1.8e-103 379.8 268 72.4
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.8e-103 379.8 268 72.4
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 2.3e-103 379.4 272 71.7
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 4.0e-103 378.6 268 72.0
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 5.2e-103 378.3 275 68.7
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 5.2e-103 378.3 268 71.3
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 3.4e-102 375.6 274 69.0
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 1.3e-101 373.6 270 69.6
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 1.7e-101 373.2 269 72.1
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 2.2e-101 372.9 273 71.1
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 2.2e-101 372.9 274 69.0
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 6.4e-101 371.3 265 72.5
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 1.1e-100 370.5 273 70.3
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 1.1e-100 370.5 272 68.4
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 1.4e-100 370.2 278 70.1
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 1.4e-100 370.2 274 68.2
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 2.4e-100 369.4 273 70.0
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 2.4e-100 369.4 272 68.8
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 4.1e-100 368.6 266 69.9
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 1.2e-99 367.1 278 69.8
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 1.2e-99 367.1 277 69.0
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 1.2e-99 367.1 268 69.8
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 2.7e-99 365.9 273 69.6
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 2.7e-99 365.9 273 69.6
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 4.6e-99 365.2 275 68.4
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 1.7e-98 363.2 277 68.2
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 2.3e-98 362.8 275 66.5
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 3.0e-98 362.5 275 69.8
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 3.9e-98 362.1 269 71.0
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 3.9e-98 362.1 325 60.9
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 3.9e-98 362.1 278 68.0
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 3.3e-97 359.0 274 67.2
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 9.5e-97 357.5 243 76.1
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 1.2e-96 357.1 268 69.0
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 3.6e-96 355.5 276 67.8
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 1.4e-95 353.6 274 69.3
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 1.8e-95 353.2 241 76.8
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 2.3e-95 352.8 270 68.5
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 1.2e-94 350.5 267 67.8
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 1.2e-94 350.5 274 66.8
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 2.0e-94 349.7 273 67.4
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 1.3e-93 347.1 276 66.3
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 1.7e-93 346.7 288 64.6
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 4.9e-93 345.1 269 67.3
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 4.9e-93 345.1 282 66.0
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 6.4e-93 344.7 282 67.0
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.1e-92 344.0 273 65.9
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 1.1e-92 344.0 264 67.8
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 2.4e-92 342.8 234 74.4
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 1.0e-90 337.4 265 64.2
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 1.3e-90 337.0 266 65.0
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 2.3e-90 336.3 273 62.3
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 1.2e-88 330.5 225 76.9
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 4.7e-88 328.6 266 61.3
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 2.9e-85 319.3 274 61.3
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.4e-84 317.0 266 62.0
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 2.4e-84 316.2 272 60.7
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 7.1e-84 314.7 240 67.5
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 4.6e-83 312.0 224 69.6
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 1.3e-82 310.5 259 60.2
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 2.4e-79 299.7 266 60.2
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 5.2e-79 298.5 236 64.4
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 4.4e-78 295.4 240 63.3
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 2.3e-74 283.1 391 43.5
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 7.3e-73 278.1 268 56.3
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.3e-69 267.3 268 54.5
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 1.2e-67 260.8 228 61.8
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 6.7e-66 255.0 269 52.4
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 2.2e-61 240.0 149 81.9
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 3.8e-53 212.6 184 64.7
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 4.3e-49 199.1 220 51.8
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.3e-49 199.1 137 70.1
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 2.2e-48 196.8 183 62.8
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 1.7e-45 187.2 147 64.6
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 5.1e-42 175.6 140 57.9
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 6.7e-42 175.3 217 46.1
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 5.3e-39 165.6 120 72.5
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 2.2e-37 160.2 133 63.2
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 1.5e-30 137.5 137 58.4
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.6e-30 136.7 80 95.0
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 5.9e-30 135.6 209 44.5
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.4e-28 131.0 133 59.4
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 5.5e-28 129.0 119 58.8
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 8.5e-21 105.1 248 32.7
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 4.2e-20 102.8 80 65.0
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 3.6e-11 73.2 108 41.7
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 3.1e-07 60.1 50 52.0


User provided reference genes

Program Settings