Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1616 Fragaria x ananassa HOM05D009091 ORTHO05D003768 1.3e-82 309.7 159 100.0
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 2.7e-67 258.8 134 97.8
FAN08G3223 Fragaria x ananassa HOM05D009091 ORTHO05D003768 3.8e-66 255.0 159 88.1
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 2.7e-64 248.8 139 92.8
FvH4_5g18423 Fragaria vesca HOM05D009091 ORTHO05D000062 1.2e-51 206.8 168 72.0
RcHm_v2.0_Chr4g0420561 Rosa chinensis HOM05D009091 ORTHO05D003768 1.7e-45 186.4 140 70.7
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 1.9e-41 172.9 121 74.4
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 2.2e-37 159.5 173 53.2
RcHm_v2.0_Chr4g0433611 Rosa chinensis HOM05D009091 ORTHO05D003768 2.2e-37 159.5 174 54.6
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 3.2e-36 155.6 93 83.9
FvH4_4g10040 Fragaria vesca HOM05D009091 ORTHO05D003768 5.4e-36 154.8 101 81.2
RcHm_v2.0_Chr7g0231331 Rosa chinensis HOM05D009091 ORTHO05D003768 9.2e-36 154.1 138 65.9
RcHm_v2.0_Chr3g0496631 Rosa chinensis HOM05D009091 ORTHO05D003768 1.5e-33 146.7 113 69.0
RcHm_v2.0_Chr1g0357501 Rosa chinensis HOM05D009091 ORTHO05D003768 5.2e-31 138.3 97 72.2
CSS0010964 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 8.1e-16 87.8 142 37.3
CSS0049472 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 8.1e-16 87.8 129 41.1
Oeu029662.1 Olea europaea HOM05D009091 ORTHO05D003768 9.9e-14 80.9 144 40.3
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 6.4e-13 78.2 143 37.1
CSS0038469 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 2.4e-12 76.3 128 42.2
Sed0001060 Sechium edule HOM05D007314 ORTHO05D003768 7.1e-12 74.7 155 35.5
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 1.2e-11 73.9 125 43.2
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.1e-11 73.2 135 38.5
RcHm_v2.0_Chr2g0133581 Rosa chinensis HOM05D020182 ORTHO05D010380 2.7e-11 72.8 99 45.5
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 3.5e-11 72.4 137 35.0
Oeu048290.1 Olea europaea HOM05D009091 ORTHO05D003768 2.3e-10 69.7 120 37.5
Rhsim03G0123400 Rhododendron simsii HOM05D007314 ORTHO05D010380 8.7e-10 67.8 139 34.5
CSS0021689 Camellia sinensis var. sinensis HOM05D008321 ORTHO05D003768 1.1e-09 67.4 119 37.0
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 1.5e-09 67.0 154 31.8
RcHm_v2.0_Chr5g0033771 Rosa chinensis HOM05D020182 ORTHO05D003768 1.5e-09 67.0 75 50.7
Oeu050751.1 Olea europaea HOM05D009091 ORTHO05D003768 3.3e-09 65.9 132 32.6
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 2.1e-08 63.2 114 41.2
FvH4_5g37213 Fragaria vesca HOM05D008321 ORTHO05D010380 4.8e-08 62.0 140 32.1
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 1.4e-07 60.5 115 39.1
PSO339G2614 Papaver somniferum HOM05D008526 ORTHO05D010380 1.4e-07 60.5 162 26.5
Oeu041304.1 Olea europaea HOM05D009091 ORTHO05D003768 2.4e-07 59.7 96 36.5
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 3.1e-07 59.3 151 33.1
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 6.9e-07 58.2 124 29.0
FvH4_1g29233 Fragaria vesca HOM05D008321 ORTHO05D003768 6.9e-07 58.2 144 33.3
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 1.5e-06 57.0 89 43.8
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 1.5e-06 57.0 124 36.3
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 2.6e-06 56.2 126 33.3
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 4.5e-06 55.5 46 54.3
FAN08G2819 Fragaria x ananassa HOM05D008321 ORTHO05D003768 4.5e-06 55.5 124 32.3
PSO339G2856 Papaver somniferum HOM05D008526 ORTHO05D010380 7.6e-06 54.7 169 29.0
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 9.9e-06 54.3 116 35.3
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 9.9e-06 54.3 141 31.9


User provided reference genes

Program Settings