Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.0e-46 188.7 92 100.0
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 6.9e-44 180.3 101 90.1
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 1.7e-26 122.5 72 83.3
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 5.0e-26 120.9 72 81.9
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 6.5e-26 120.6 72 80.6
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 6.5e-26 120.6 72 81.9
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 8.5e-26 120.2 72 80.6
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 8.5e-26 120.2 72 80.6
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.5e-25 119.4 72 80.6
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.5e-25 119.4 72 80.6
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 1.9e-25 119.0 72 79.2
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 1.9e-25 119.0 72 79.2
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 2.5e-25 118.6 72 77.8
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 2.5e-25 118.6 72 79.2
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 2.5e-25 118.6 72 79.2
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 2.5e-25 118.6 72 77.8
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.2e-25 118.2 72 77.8
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.2e-25 118.2 72 77.8
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 3.2e-25 118.2 72 77.8
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 4.2e-25 117.9 72 79.2
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 4.2e-25 117.9 72 79.2
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 4.2e-25 117.9 72 76.4
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 4.2e-25 117.9 72 76.4
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 4.2e-25 117.9 72 79.2
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 5.5e-25 117.5 72 75.0
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 5.5e-25 117.5 72 76.4
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 5.5e-25 117.5 72 77.8
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 7.2e-25 117.1 72 76.4
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 7.2e-25 117.1 72 79.2
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 7.2e-25 117.1 72 77.8
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 7.2e-25 117.1 72 77.8
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 9.4e-25 116.7 72 76.4
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 9.4e-25 116.7 72 76.4
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.2e-24 116.3 72 75.0
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 1.2e-24 116.3 72 75.0
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 1.2e-24 116.3 72 79.2
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.6e-24 115.9 72 79.2
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.6e-24 115.9 72 79.2
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.6e-24 115.9 72 76.4
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 1.6e-24 115.9 72 76.4
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 1.6e-24 115.9 72 73.6
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 1.6e-24 115.9 72 73.6
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 2.1e-24 115.5 72 76.4
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 2.1e-24 115.5 72 75.0
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 2.1e-24 115.5 72 75.0
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 2.1e-24 115.5 72 75.0
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 2.7e-24 115.2 70 77.1
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 2.7e-24 115.2 72 75.0
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 2.7e-24 115.2 72 76.4
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 2.7e-24 115.2 72 75.0
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 3.6e-24 114.8 72 72.2
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 3.6e-24 114.8 72 73.6
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 3.6e-24 114.8 72 75.0
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 3.6e-24 114.8 72 77.8
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 4.7e-24 114.4 72 75.0
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 6.1e-24 114.0 72 75.0
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 6.1e-24 114.0 72 75.0
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 6.1e-24 114.0 72 77.8
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 6.1e-24 114.0 72 79.2
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 8.0e-24 113.6 72 73.6
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 1.0e-23 113.2 72 75.0
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 1.4e-23 112.8 72 72.2
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 1.8e-23 112.5 72 73.6
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 2.3e-23 112.1 72 75.0
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 2.3e-23 112.1 72 76.4
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 2.3e-23 112.1 72 73.6
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 4.0e-23 111.3 72 70.8
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 4.0e-23 111.3 67 80.6
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 5.2e-23 110.9 72 75.0
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 6.8e-23 110.5 72 70.8
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 8.8e-23 110.2 72 72.2
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 8.8e-23 110.2 72 72.2
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 8.8e-23 110.2 72 72.2
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 1.2e-22 109.8 72 73.6
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 1.2e-22 109.8 72 72.2
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 1.5e-22 109.4 72 73.6
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 1.5e-22 109.4 72 73.6
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 1.5e-22 109.4 72 73.6
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 2.0e-22 109.0 72 70.8
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 2.0e-22 109.0 72 70.8
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 2.6e-22 108.6 72 72.2
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 2.6e-22 108.6 72 72.2
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 2.6e-22 108.6 72 72.2
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 2.6e-22 108.6 72 72.2
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 2.6e-22 108.6 72 72.2
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 2.6e-22 108.6 72 72.2
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 3.4e-22 108.2 72 72.2
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 3.4e-22 108.2 72 72.2
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 3.4e-22 108.2 67 76.1
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 3.4e-22 108.2 72 70.8
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 5.7e-22 107.5 72 70.8
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 5.7e-22 107.5 72 70.8
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 5.7e-22 107.5 72 69.4
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 7.5e-22 107.1 72 68.1
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 9.8e-22 106.7 72 69.4
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 1.7e-21 105.9 72 70.8
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 2.8e-21 105.1 72 70.8
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 3.7e-21 104.8 72 68.1
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 2.4e-20 102.1 72 63.9
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 3.1e-20 101.7 73 76.7
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 5.4e-20 100.9 66 74.2
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 9.1e-20 100.1 72 61.1
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 1.2e-19 99.8 72 63.9
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 2.0e-19 99.0 67 65.7
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 1.3e-18 96.3 72 56.9
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 2.8e-16 88.6 51 80.4
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 1.4e-15 86.3 53 81.1
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 6.8e-15 84.0 56 71.4
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 1.7e-10 69.3 50 68.0
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.9e-09 65.9 38 76.3


User provided reference genes

Program Settings