Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1532 Fragaria x ananassa HOM05D002310 ORTHO05D002326 5.4e-165 584.3 312 100.0
FvH4_4g15540 Fragaria vesca HOM05D002310 ORTHO05D002326 2.5e-130 469.2 307 85.7
FAN12G2432 Fragaria x ananassa HOM05D002310 ORTHO05D002326 2.5e-130 469.2 307 85.7
FAN07G0096 Fragaria x ananassa HOM05D002310 ORTHO05D002326 3.9e-123 445.3 323 79.9
FAN17G0990 Fragaria x ananassa HOM05D002310 ORTHO05D002326 1.6e-108 396.7 307 76.2
RcHm_v2.0_Chr4g0416221 Rosa chinensis HOM05D002310 ORTHO05D002326 8.5e-102 374.4 314 70.7
MD16G1193900 Malus domestica HOM05D002310 ORTHO05D002326 1.0e-67 261.2 318 58.2
Prupe.1G013600 Prunus persica HOM05D002310 ORTHO05D002326 2.5e-61 240.0 321 55.5
Dinv44536 Davidia involucrata HOM05D002310 ORTHO05D002326 1.7e-57 227.3 387 44.7
Cfa015645 Carpinus fangiana HOM05D002310 ORTHO05D002326 4.1e-56 222.6 321 47.4
GSVIVG01017976001 Vitis vinifera HOM05D002310 ORTHO05D002326 1.7e-54 217.2 332 47.9
CiPaw.01G166000 Carya illinoinensis HOM05D002310 ORTHO05D002326 5.1e-54 215.7 355 44.2
CANSAT78G0613 Cannabis sativa HOM05D002310 ORTHO05D002326 1.1e-53 214.5 355 49.3
Nn4g26323 Nelumbo nucifera HOM05D002310 ORTHO05D002326 1.1e-53 214.5 352 45.2
Haze_00900 Corylus avellana HOM05D002310 ORTHO05D002326 5.6e-53 212.2 326 46.6
CSS0035785 Camellia sinensis var. sinensis HOM05D002310 ORTHO05D002326 2.1e-52 210.3 276 50.0
TAR362G0728 Trochodendron aralioides HOM05D002310 ORTHO05D002326 1.5e-50 204.1 373 43.7
CiPaw.02G097300 Carya illinoinensis HOM05D002310 ORTHO05D002326 8.4e-49 198.4 354 41.8
COL.COLO4_21477 Corchorus olitorius HOM05D002310 ORTHO05D002326 2.4e-48 196.8 313 48.9
CsaV3_7G022500 Cucumis sativus L. HOM05D002310 ORTHO05D002326 4.1e-48 196.1 307 44.6
Cpa.g.sc58.109 Carica papaya HOM05D002310 ORTHO05D002326 1.6e-47 194.1 296 47.3
Gohir.A09G056100 Gossypium hirsutum HOM05D002310 ORTHO05D002326 5.1e-46 189.1 324 45.7
Potri.010G087400 Populus trichocarpa HOM05D002310 ORTHO05D002326 3.3e-45 186.4 308 47.4
ClCG06G006230 Citrullus lanatus HOM05D002310 ORTHO05D002326 4.3e-45 186.0 384 39.3
Gorai.006G068300 Gossypium raimondii HOM05D002310 ORTHO05D002326 4.3e-45 186.0 312 44.9
PSO210G3829 Papaver somniferum HOM05D002310 ORTHO05D002326 5.6e-45 185.7 272 44.1
Sabra10G0055300 Salix brachista HOM05D002310 ORTHO05D002326 7.3e-45 185.3 306 46.1
Actinidia23510 Actinidia chinensis HOM05D002310 ORTHO05D002326 1.2e-44 184.5 257 46.3
QL06p002477 Quercus lobata HOM05D002310 ORTHO05D002326 4.4e-42 176.0 357 46.8
Manes.03G178600 Manihot esculenta HOM05D002310 ORTHO05D002326 5.8e-42 175.6 318 44.3
TWI09G0856 Tripterygium wilfordii HOM05D002310 ORTHO05D002326 7.6e-42 175.3 278 45.7
Rhsim04G0202200 Rhododendron simsii HOM05D002310 ORTHO05D002326 8.4e-41 171.8 335 43.0
Duzib151G0125 Durio zibethinus HOM05D002310 ORTHO05D002326 1.1e-40 171.4 334 43.7
Gohir.D09G055300 Gossypium hirsutum HOM05D002310 ORTHO05D002326 1.1e-40 171.4 316 43.0
Potri.008G152900 Populus trichocarpa HOM05D002310 ORTHO05D002326 1.2e-39 167.9 312 42.6
MELO3C012650.2 Cucumis melo HOM05D002310 ORTHO05D002326 2.7e-39 166.8 360 42.5
Sc15g0003290 Simmondsia chinensis HOM05D002310 ORTHO05D002326 1.3e-38 164.5 326 41.1
PGSC0003DMG400030084 Solanum tuberosum HOM05D002310 ORTHO05D002326 8.7e-38 161.8 335 40.0
CDE02G0428 Ceratophyllum demersum HOM05D002310 ORTHO05D002326 1.1e-37 161.4 335 39.1
Atru.ctg752_3.77 Acer truncatum HOM05D002310 ORTHO05D002326 1.5e-37 161.0 347 38.9
Duzib212G0102 Durio zibethinus HOM05D002310 ORTHO05D002326 9.6e-37 158.3 211 50.2
Eucgr.H03481 Eucalyptus grandis HOM05D002310 ORTHO05D002326 2.1e-36 157.1 278 42.8
Ca_10898_v3 Cicer arietinum L. HOM05D002310 ORTHO05D002326 3.6e-36 156.4 336 38.4
Hma1.2p1_1344F.1_g277120 Hydrangea macrophylla HOM05D002310 ORTHO05D002326 6.2e-36 155.6 360 38.6
Thecc.04G232000 Theobroma cacao HOM05D002310 ORTHO05D002326 6.2e-36 155.6 223 49.3
Aqoxy2G03391 Aquilegia oxysepala HOM05D002310 ORTHO05D002326 1.4e-35 154.5 405 38.5
CDE05G2383 Ceratophyllum demersum HOM05D002310 ORTHO05D002326 3.1e-35 153.3 326 39.0
Lj5g0003431 Lotus japonicus HOM05D002310 ORTHO05D002326 4.5e-34 149.4 307 47.9
Solyc09g076040.3 Solanum lycopersicum HOM05D002310 ORTHO05D002326 5.8e-34 149.1 329 41.3
Peaxi162Scf00092g01019 Petunia axillaris HOM05D002310 ORTHO05D002326 9.9e-34 148.3 332 44.6
Lj6A608G62 Lonicera japonica HOM05D002310 ORTHO05D002326 1.3e-33 147.9 219 45.2
Sp3g20200 Schrenkiella parvula HOM05D002310 ORTHO05D002326 1.7e-33 147.5 266 43.6
Lsat_1_v5_gn_7_67261 Lactuca sativa HOM05D002310 ORTHO05D002326 2.2e-33 147.1 343 38.5
TAR636G0317 Trochodendron aralioides HOM05D002310 ORTHO05D002326 1.1e-32 144.8 258 40.3
AT3G22430 Arabidopsis thaliana HOM05D002310 ORTHO05D002326 1.9e-32 144.1 260 42.3
Sed0017994 Sechium edule HOM05D002310 ORTHO05D002326 3.2e-32 143.3 307 39.1
Thhalv10020450m.g Eutrema salsugineum HOM05D002310 ORTHO05D002326 4.2e-32 142.9 277 41.5
Actinidia40145 Actinidia chinensis HOM05D002310 ORTHO05D002326 7.1e-32 142.1 331 37.2
arahy.Tifrunner.gnm1.ann1.5P4QKH Arachis hypogaea HOM05D002310 ORTHO05D002326 2.1e-31 140.6 330 39.1
Sopen09g030870 Solanum pennellii HOM05D002310 ORTHO05D002326 2.1e-31 140.6 329 41.3
ECA240G3014 Erigeron canadensis HOM05D002310 ORTHO05D002326 2.7e-31 140.2 258 39.9
AL3G36740 Arabidopsis lyrata HOM05D002310 ORTHO05D002326 7.9e-31 138.7 260 42.7
CARHR098340 Cardamine hirsuta HOM05D002310 ORTHO05D002326 1.8e-30 137.5 223 43.9
Cc03_g03780 Coffea canephora HOM05D002310 ORTHO05D002326 2.3e-30 137.1 231 44.6
Sabra08G0116500 Salix brachista HOM05D002310 ORTHO05D002326 3.9e-30 136.3 309 40.1
TAR362G0281 Trochodendron aralioides HOM05D002310 ORTHO05D002326 3.9e-30 136.3 378 38.4
PGR004G1373 Punica granatum HOM05D002310 ORTHO05D002326 5.1e-30 136.0 237 44.7
Carub.0003s2261 Capsella rubella HOM05D002310 ORTHO05D002326 1.5e-29 134.4 221 43.4
Ciclev10005503m.g Citrus clementina HOM05D002310 ORTHO05D002326 1.9e-29 134.0 308 40.3
TWI73G1015 Tripterygium wilfordii HOM05D002310 ORTHO05D002326 1.9e-29 134.0 272 40.4
VMungo0720G0449 Vigna mungo HOM05D002310 ORTHO05D002326 2.5e-29 133.7 319 42.3
BcaC05g28069 Brassica carinata HOM05D002310 ORTHO05D002326 3.3e-29 133.3 234 43.2
C05p40910 Brassica napus HOM05D002310 ORTHO05D002326 3.3e-29 133.3 234 43.2
BolC5t32833H Brassica oleracea HOM05D002310 ORTHO05D002326 3.3e-29 133.3 234 43.2
THA.LOC104808546 Tarenaya hassleriana HOM05D002310 ORTHO05D002326 3.3e-29 133.3 333 42.9
Medtr1g103740 Medicago truncatula HOM05D002310 ORTHO05D002326 9.6e-29 131.7 215 43.7
EL10As3g23290 Beta vulgaris HOM05D002310 ORTHO05D002326 1.3e-28 131.3 224 42.9
Psat6g207480 Pisum sativum HOM05D002310 ORTHO05D002326 1.3e-28 131.3 317 43.2
Migut.G00339 Erythranthe guttata HOM05D002310 ORTHO05D002326 1.1e-27 128.3 247 42.1
DCAR_027217 Daucus carota HOM05D002310 ORTHO05D002326 1.4e-27 127.9 337 36.5
PSO832G1500 Papaver somniferum HOM05D002310 ORTHO05D002326 1.8e-27 127.5 173 43.9
MSTRG.4031 Avicennia marina HOM05D002310 ORTHO05D002326 3.1e-27 126.7 345 36.5
TPR.G5506 Trifolium pratense HOM05D002310 ORTHO05D002326 3.1e-27 126.7 218 43.1
SGA_v2.0_scaffold39G15233 Striga asiatica HOM05D002310 ORTHO05D002326 5.3e-27 125.9 250 42.0
TAR362G0961 Trochodendron aralioides HOM05D002310 ORTHO05D002326 6.9e-27 125.6 356 38.5
Dinv13995 Davidia involucrata HOM05D002310 ORTHO05D002326 9.0e-27 125.2 175 45.7
BraA05t21506Z Brassica rapa HOM05D002310 ORTHO05D002326 1.2e-26 124.8 258 40.7
Oeu020078.1 Olea europaea HOM05D002310 ORTHO05D002326 1.2e-26 124.8 367 35.1
BcaB06g26348 Brassica carinata HOM05D002310 ORTHO05D002326 2.6e-26 123.6 260 41.9
A05p26290 Brassica napus HOM05D002310 ORTHO05D002326 3.4e-26 123.2 257 40.9
SGA_v2.0_scaffold257G45713 Striga asiatica HOM05D002310 ORTHO05D002326 3.4e-26 123.2 249 40.6
SalBow2G1797 Salvia bowleyana HOM05D002310 ORTHO05D002326 7.6e-26 122.1 326 42.0
arahy.Tifrunner.gnm1.ann1.Q8TT5G Arachis hypogaea HOM05D002310 ORTHO05D002326 9.9e-26 121.7 208 45.2
HPP92_024362 Vanilla planifolia HOM05D002310 ORTHO05D002326 2.2e-25 120.6 325 35.7
Nitab4.5_0004258g0040 Nicotiana tabacum HOM05D002310 ORTHO05D002326 1.9e-24 117.5 207 39.6
HanXRQChr05g0145901 Helianthus annuus HOM05D002310 ORTHO05D002326 2.4e-24 117.1 253 39.1
CAN.G490.5 Capsicum annuum HOM05D002310 ORTHO05D002326 5.5e-24 115.9 210 41.9
Oeu011619.2 Olea europaea HOM05D002310 ORTHO05D002326 7.1e-24 115.5 340 39.1
AUR62033632 Chenopodium quinoa HOM05D002310 ORTHO05D002326 1.2e-23 114.8 211 41.7
Nitab4.5_0024240g0010 Nicotiana tabacum HOM05D002310 ORTHO05D002326 2.1e-23 114.0 331 34.1
AUR62034749 Chenopodium quinoa HOM05D002310 ORTHO05D002326 3.0e-22 110.2 215 40.9
CSS0045550 Camellia sinensis var. sinensis HOM05D002310 ORTHO05D002326 5.1e-22 109.4 350 34.9
Phvul.007G057400 Phaseolus vulgaris HOM05D002310 ORTHO05D002326 5.1e-22 109.4 334 36.2
Ah.04g157050 Amaranthus hybridus HOM05D002310 ORTHO05D002326 1.1e-21 108.2 242 40.1
Glyma.20G146000 Glycine max HOM05D002310 ORTHO05D002326 1.1e-21 108.2 309 36.2
Glyma.10G248100 Glycine max HOM05D002310 ORTHO05D002326 1.5e-21 107.8 306 36.3
Ah.13g072680 Amaranthus hybridus HOM05D002310 ORTHO05D002326 2.0e-18 97.4 326 38.3
ATR0697G286 Amborella trichopoda HOM05D002310 ORTHO05D002326 6.7e-14 82.4 364 32.1
Sc19g0004150 Simmondsia chinensis HOM05D002310 ORTHO05D002326 6.3e-12 75.9 313 27.2
Os03g0159200 Oryza sativa ssp. japonica HOM05D002310 ORTHO05D002326 3.4e-10 70.1 210 31.4
Lalb_Chr02g0140601 Lupinus albus HOM05D002310 ORTHO05D002326 1.3e-09 68.2 212 29.7
Actinidia36958 Actinidia chinensis HOM05D002310 ORTHO05D002326 6.5e-09 65.9 146 43.8
Os11g0579700 Oryza sativa ssp. japonica HOM05D002310 ORTHO05D002326 1.4e-08 64.7 217 28.6
Nn7g37310 Nelumbo nucifera HOM05D002310 ORTHO05D002326 2.1e-07 60.8 29 93.1


User provided reference genes

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