Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1531 Fragaria x ananassa HOM05D000108 ORTHO05D006029 2.1e-38 161.8 77 100.0
FvH4_6g05340 Fragaria vesca HOM05D000108 ORTHO05D006029 3.3e-23 111.3 61 86.9
FAN14G1533 Fragaria x ananassa HOM05D000108 ORTHO05D006029 3.3e-23 111.3 61 86.9
FAN14G3015 Fragaria x ananassa HOM05D000108 ORTHO05D006029 3.3e-23 111.3 61 86.9
FAN05G0788 Fragaria x ananassa HOM05D000108 ORTHO05D006029 9.6e-23 109.8 61 85.2
FAN05G0886 Fragaria x ananassa HOM05D000108 ORTHO05D006029 9.6e-23 109.8 61 85.2
FAN09G1914 Fragaria x ananassa HOM05D000273 ORTHO05D006029 1.8e-21 105.5 61 83.6
FAN02G0002 Fragaria x ananassa HOM05D000108 ORTHO05D006029 5.3e-21 104.0 61 83.6
RcHm_v2.0_Chr3g0454101 Rosa chinensis HOM05D000108 ORTHO05D006029 2.6e-20 101.7 61 78.7
FAN17G3027 Fragaria x ananassa HOM05D000108 ORTHO05D006029 8.5e-19 96.7 47 93.6
FAN20G1751 Fragaria x ananassa HOM05D000108 ORTHO05D006029 2.5e-18 95.1 47 93.6
FAN14G5781 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.2e-18 94.4 67 67.2
Prupe.6G330200 Prunus persica HOM05D000108 ORTHO05D006029 9.3e-18 93.2 61 68.9
Cpa.g.sc48.12 Carica papaya HOM05D000108 ORTHO05D006029 1.8e-16 89.0 61 67.2
FvH4_6g02040 Fragaria vesca HOM05D000108 ORTHO05D006029 2.3e-16 88.6 63 69.8
Ciclev10000365m.g Citrus clementina HOM05D000273 ORTHO05D000198 3.0e-16 88.2 61 63.9
FAN14G2965 Fragaria x ananassa HOM05D000108 ORTHO05D006029 3.9e-16 87.8 52 75.0
Haze_25394 Corylus avellana HOM05D000108 ORTHO05D006029 5.1e-16 87.4 61 63.9
TWI56G0698 Tripterygium wilfordii HOM05D000108 ORTHO05D006029 5.1e-16 87.4 61 67.2
MD12G1223800 Malus domestica HOM05D000108 ORTHO05D006029 6.7e-16 87.0 61 67.2
CiPaw.07G014600 Carya illinoinensis HOM05D000108 ORTHO05D006029 1.5e-15 85.9 61 63.9
Potri.005G038900 Populus trichocarpa HOM05D000108 ORTHO05D006029 1.5e-15 85.9 60 70.0
arahy.Tifrunner.gnm1.ann1.G0F2H7 Arachis hypogaea HOM05D000108 ORTHO05D006029 2.5e-15 85.1 61 62.3
arahy.Tifrunner.gnm1.ann1.JIGP3F Arachis hypogaea HOM05D000108 ORTHO05D006029 2.5e-15 85.1 61 62.3
Sabra05G0037700 Salix brachista HOM05D000108 ORTHO05D006029 2.5e-15 85.1 60 70.0
Glyma.15G256400 Glycine max HOM05D000108 ORTHO05D006029 3.3e-15 84.7 62 66.1
Cfa006545 Carpinus fangiana HOM05D000108 ORTHO05D006029 4.3e-15 84.3 61 62.3
Lj1g0019134 Lotus japonicus HOM05D000108 ORTHO05D006029 4.3e-15 84.3 61 60.7
Lalb_Chr15g0077071 Lupinus albus HOM05D000108 ORTHO05D006029 4.3e-15 84.3 61 62.3
PSO407G0355 Papaver somniferum HOM05D000108 ORTHO05D006029 7.4e-15 83.6 61 65.6
Sp1g24030 Schrenkiella parvula HOM05D000108 ORTHO05D006029 7.4e-15 83.6 61 60.7
QL03p004313 Quercus lobata HOM05D000108 ORTHO05D006029 1.3e-14 82.8 61 60.7
Sed0006246 Sechium edule HOM05D000108 ORTHO05D006029 1.3e-14 82.8 61 62.3
CANSAT25G0558 Cannabis sativa HOM05D000108 ORTHO05D006029 1.6e-14 82.4 61 63.9
Gohir.A11G263132 Gossypium hirsutum HOM05D000108 ORTHO05D006029 2.2e-14 82.0 61 63.9
AL5G46340 Arabidopsis lyrata HOM05D000108 ORTHO05D006029 2.8e-14 81.6 61 60.7
AT3G63480 Arabidopsis thaliana HOM05D000108 ORTHO05D006029 2.8e-14 81.6 61 60.7
PSO170G2040 Papaver somniferum HOM05D000108 ORTHO05D006029 2.8e-14 81.6 61 63.9
Cc02_g32690 Coffea canephora HOM05D000108 ORTHO05D006029 3.7e-14 81.3 60 61.7
Oeu015682.1 Olea europaea HOM05D000108 ORTHO05D006029 3.7e-14 81.3 61 62.3
GSVIVG01000008001 Vitis vinifera HOM05D000108 ORTHO05D006029 3.7e-14 81.3 60 65.0
Atru.chr11.1582 Acer truncatum HOM05D000108 ORTHO05D006029 4.8e-14 80.9 61 59.0
PSO210G1121 Papaver somniferum HOM05D000108 ORTHO05D006029 4.8e-14 80.9 61 62.3
Aa31LG10G17350 Aethionema arabicum HOM05D000108 ORTHO05D006029 6.3e-14 80.5 61 60.7
CSS0038768 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D006029 6.3e-14 80.5 61 57.4
CSS0044833 Camellia sinensis var. sinensis HOM05D000108 ORTHO05D006029 6.3e-14 80.5 61 57.4
Thhalv10005951m.g Eutrema salsugineum HOM05D000108 ORTHO05D006029 6.3e-14 80.5 61 60.7
Glyma.08G170500 Glycine max HOM05D000108 ORTHO05D006029 8.2e-14 80.1 62 61.3
TAR633G2196 Trochodendron aralioides HOM05D000108 ORTHO05D006029 8.2e-14 80.1 61 59.0
Aqoxy2G02776 Aquilegia oxysepala HOM05D000108 ORTHO05D006029 1.1e-13 79.7 61 59.0
SalBow5G0045 Salvia bowleyana HOM05D000108 ORTHO05D006029 1.1e-13 79.7 68 57.4
SalBow5G4695 Salvia bowleyana HOM05D000108 ORTHO05D006029 1.1e-13 79.7 68 57.4
Lj9A682T48 Lonicera japonica HOM05D000108 ORTHO05D006029 1.8e-13 79.0 61 60.7
Carub.0005s3009 Capsella rubella HOM05D000108 ORTHO05D006029 3.1e-13 78.2 61 59.0
COL.COLO4_13517 Corchorus olitorius HOM05D000273 ORTHO05D006029 4.1e-13 77.8 61 62.3
AUR62000867 Chenopodium quinoa HOM05D000108 ORTHO05D006029 5.3e-13 77.4 62 58.1
DCAR_003313 Daucus carota HOM05D000108 ORTHO05D006029 6.9e-13 77.0 61 57.4
Duzib128G2000 Durio zibethinus HOM05D000108 ORTHO05D006029 6.9e-13 77.0 61 60.7
ATR1155G012 Amborella trichopoda HOM05D000108 ORTHO05D006029 9.1e-13 76.6 61 59.0
Gohir.D11G273200 Gossypium hirsutum HOM05D000108 ORTHO05D006029 9.1e-13 76.6 61 60.7
Gorai.007G294600 Gossypium raimondii HOM05D000108 ORTHO05D006029 9.1e-13 76.6 61 60.7
Actinidia19806 Actinidia chinensis HOM05D000273 ORTHO05D006029 1.2e-12 76.3 62 59.7
COL.COLO4_16160 Corchorus olitorius HOM05D000108 ORTHO05D006029 1.2e-12 76.3 61 62.3
MBI05_g33287_MAGBIO Magnolia biondii HOM05D000108 ORTHO05D006029 1.2e-12 76.3 61 54.1
Os08g0117000 Oryza sativa ssp. japonica HOM05D000108 ORTHO05D006029 1.2e-12 76.3 61 57.4
AUR62005109 Chenopodium quinoa HOM05D000108 ORTHO05D006029 1.5e-12 75.9 60 58.3
Manes.08G123200 Manihot esculenta HOM05D000108 ORTHO05D006029 1.5e-12 75.9 61 59.0
Thecc.05G308300 Theobroma cacao HOM05D000108 ORTHO05D006029 1.5e-12 75.9 61 60.7
Lsat_1_v5_gn_3_61380 Lactuca sativa HOM05D000108 ORTHO05D006029 2.0e-12 75.5 61 60.7
MBI05_g40560_MAGBIO Magnolia biondii HOM05D000108 ORTHO05D006029 2.0e-12 75.5 61 54.1
Zm00001eb260930 Zea mays HOM05D000108 ORTHO05D006029 2.0e-12 75.5 61 57.4
Rhsim05G0144600 Rhododendron simsii HOM05D000108 ORTHO05D006029 3.4e-12 74.7 60 56.7
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 3.4e-12 74.7 61 55.7
Migut.B01216 Erythranthe guttata HOM05D000108 ORTHO05D006029 4.5e-12 74.3 57 61.4
CAN.G1134.20 Capsicum annuum HOM05D000108 ORTHO05D006029 5.9e-12 73.9 60 60.0
CARHR291490 Cardamine hirsuta HOM05D000108 ORTHO05D006029 5.9e-12 73.9 61 57.4
Nitab4.5_0004940g0140 Nicotiana tabacum HOM05D000108 ORTHO05D006029 5.9e-12 73.9 60 60.0
Solyc01g098670.3 Solanum lycopersicum HOM05D000108 ORTHO05D006029 1.0e-11 73.2 60 58.3
Sopen01g042210 Solanum pennellii HOM05D000108 ORTHO05D006029 1.0e-11 73.2 60 58.3
THA.LOC104823031 Tarenaya hassleriana HOM05D000108 ORTHO05D006029 1.0e-11 73.2 61 57.4
Ah.06g190120 Amaranthus hybridus HOM05D000273 ORTHO05D006029 1.7e-11 72.4 60 56.7
MELO3C010147.2 Cucumis melo HOM05D000108 ORTHO05D006029 1.7e-11 72.4 61 55.7
CsaV3_1G045180 Cucumis sativus L. HOM05D000108 ORTHO05D006029 1.7e-11 72.4 61 55.7
Nn4g26164 Nelumbo nucifera HOM05D000108 ORTHO05D006029 1.7e-11 72.4 61 54.1
EL10Ac4g09307 Beta vulgaris HOM05D000108 ORTHO05D006029 2.2e-11 72.0 60 56.7
Eucgr.K01889 Eucalyptus grandis HOM05D000108 ORTHO05D006029 2.9e-11 71.6 61 55.7
Nitab4.5_0007238g0020 Nicotiana tabacum HOM05D000108 ORTHO05D006029 2.9e-11 71.6 60 56.7
vmacro19645 Vaccinium macrocarpon HOM05D000108 ORTHO05D006029 2.9e-11 71.6 46 69.6
HanXRQChr17g0550581 Helianthus annuus HOM05D000108 ORTHO05D006029 3.8e-11 71.2 61 59.0
PGR102G1168 Punica granatum HOM05D000108 ORTHO05D006029 5.0e-11 70.9 61 54.1
ECA246G1564 Erigeron canadensis HOM05D000108 ORTHO05D006029 6.5e-11 70.5 61 54.1
Hund07045 Selenicereus undatus HOM05D000108 ORTHO05D006029 1.1e-10 69.7 57 59.6
ClCG03G010060 Citrullus lanatus HOM05D000108 ORTHO05D006029 1.4e-10 69.3 74 47.3
Peaxi162Scf00434g00333 Petunia axillaris HOM05D000108 ORTHO05D006029 1.4e-10 69.3 46 65.2
HanXRQChr04g0113271 Helianthus annuus HOM05D000108 ORTHO05D006029 1.9e-10 68.9 56 60.7
VMungo0540G1334 Vigna mungo HOM05D000108 ORTHO05D006029 7.2e-10 67.0 58 56.9
SMO117G0033 Selaginella moellendorffii HOM05D000108 ORTHO05D006029 4.6e-09 64.3 60 46.7
AagrBONN_evm.TU.Sc2ySwM_344.3357 Anthoceros agrestis HOM05D000108 ORTHO05D006029 7.9e-09 63.5 61 47.5
SHI18208 Sapria himalayana HOM05D000108 ORTHO05D006029 3.9e-08 61.2 47 63.8
Zm00001eb064560 Zea mays HOM05D000108 ORTHO05D006029 7.4e-07 57.0 46 52.2
CBR_g55234 Chara braunii HOM05D000108 ORTHO05D006029 2.2e-06 55.5 55 45.5


User provided reference genes

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