Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 1.3e-183 646.4 338 100.0
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 4.0e-182 641.3 338 98.8
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 7.9e-178 627.1 338 96.7
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 8.4e-172 607.1 398 84.2
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 2.7e-154 548.9 338 84.9
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 1.6e-146 523.1 330 80.6
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 1.3e-143 513.5 338 79.3
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 4.1e-142 508.4 338 76.9
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 4.1e-142 508.4 338 78.1
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 9.1e-142 507.3 338 77.2
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 1.6e-141 506.5 338 76.0
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 1.0e-140 503.8 327 78.0
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 3.8e-140 501.9 338 76.9
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 6.5e-140 501.1 334 78.4
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 8.5e-140 500.7 338 75.7
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 1.5e-139 500.0 338 75.7
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 1.5e-139 500.0 338 74.3
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 2.5e-139 499.2 330 76.7
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 4.2e-139 498.4 334 76.9
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 7.2e-139 497.7 338 76.3
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 1.6e-138 496.5 338 76.0
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 2.1e-138 496.1 331 75.2
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 3.6e-138 495.4 332 76.5
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 4.7e-138 495.0 338 75.1
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 4.7e-138 495.0 338 72.8
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 1.4e-137 493.4 331 74.9
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 1.4e-137 493.4 338 75.4
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 1.8e-137 493.0 338 75.1
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 5.2e-137 491.5 338 75.1
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 1.5e-136 490.0 338 75.7
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 1.5e-136 490.0 338 74.9
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 2.0e-136 489.6 338 71.9
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 2.6e-136 489.2 330 75.8
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 4.4e-136 488.4 317 78.9
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 9.8e-136 487.3 328 77.1
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 2.2e-135 486.1 335 73.4
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 2.8e-135 485.7 326 76.1
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 6.3e-135 484.6 335 74.3
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 1.8e-134 483.0 335 73.7
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 7.0e-134 481.1 338 73.4
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 2.7e-133 479.2 335 74.3
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 4.5e-133 478.4 337 72.4
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 5.9e-133 478.0 330 74.5
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 7.7e-133 477.6 375 69.1
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 1.0e-132 477.2 322 75.8
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 2.9e-132 475.7 334 73.1
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 3.8e-132 475.3 334 73.1
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 6.5e-132 474.6 334 73.4
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 8.5e-132 474.2 338 73.7
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 3.2e-131 472.2 329 73.9
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 4.2e-131 471.9 336 71.4
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 4.2e-131 471.9 322 74.8
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 2.1e-130 469.5 336 70.2
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 8.0e-130 467.6 337 70.9
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 1.8e-129 466.5 334 71.6
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 2.3e-129 466.1 330 73.0
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 4.0e-129 465.3 329 72.3
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 4.0e-129 465.3 330 71.5
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 5.2e-129 464.9 356 69.9
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 6.8e-129 464.5 330 72.7
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 6.8e-129 464.5 334 72.2
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 8.8e-129 464.2 330 72.7
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 3.4e-128 462.2 338 71.0
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 4.4e-128 461.8 337 71.2
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 5.7e-128 461.5 330 71.8
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 7.5e-128 461.1 336 70.5
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 1.3e-127 460.3 338 71.0
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 3.7e-127 458.8 339 70.8
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 1.8e-126 456.4 334 69.8
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 5.4e-126 454.9 326 71.8
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 1.2e-125 453.8 328 71.6
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 1.3e-124 450.3 338 67.8
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 1.7e-124 449.9 330 67.9
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 2.9e-124 449.1 332 69.3
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 2.1e-122 443.0 331 66.2
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 2.1e-122 443.0 347 67.1
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 3.0e-121 439.1 322 70.5
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 1.5e-120 436.8 345 66.7
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 1.3e-116 423.7 338 67.5
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 7.3e-115 417.9 329 67.2
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 9.5e-115 417.5 336 64.9
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.4e-113 413.7 335 66.6
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 3.1e-113 412.5 338 64.8
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 7.0e-110 401.4 303 68.6
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 6.0e-109 398.3 290 72.1
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 7.8e-109 397.9 330 64.2
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 1.5e-107 393.7 326 61.7
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 6.2e-106 388.3 330 63.6
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 1.5e-99 367.1 333 55.0
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 1.1e-97 360.9 256 72.3
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 5.8e-96 355.1 322 56.2
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 4.9e-95 352.1 243 70.0
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 4.9e-87 325.5 208 78.4
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 2.4e-86 323.2 327 52.3
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.0e-84 317.8 198 78.8
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 9.0e-81 304.7 326 49.4
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 8.4e-79 298.1 202 78.2
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 1.3e-76 290.8 185 77.3
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 6.0e-69 265.4 326 44.5
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 2.3e-68 263.5 375 46.7
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 8.7e-68 261.5 319 45.8
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 4.0e-65 252.7 211 64.5
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 4.5e-64 249.2 352 41.5
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 5.1e-60 235.7 173 67.6
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 3.1e-49 199.9 172 54.7
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 2.1e-45 187.2 153 65.4
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 8.2e-42 175.3 284 41.9
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 8.2e-42 175.3 284 41.9
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 1.4e-41 174.5 345 34.5
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 3.1e-33 146.7 89 77.5
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.3e-31 141.4 125 61.6
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 5.5e-30 136.0 124 58.9
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 1.0e-23 115.2 338 29.0
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 3.6e-21 106.7 74 64.9
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 6.1e-13 79.3 59 69.5
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 1.0e-12 78.6 149 38.3
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 1.0e-12 78.6 149 38.3
RcHm_v2.0_Chr5g0047461 Rosa chinensis HOM05D006743 ORTHO05D008518 3.1e-09 67.0 35 97.1
RcHm_v2.0_Chr7g0231891 Rosa chinensis HOM05D006743 ORTHO05D008518 2.3e-07 60.8 35 94.3


User provided reference genes

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