Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1322 Fragaria x ananassa HOM05D007789 ORTHO05D008963 9.0e-113 410.2 200 100.0
FAN10G2265 Fragaria x ananassa HOM05D007789 ORTHO05D008963 7.9e-69 264.2 228 62.7
FAN20G3144 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.7e-66 256.5 220 62.7
FvH4_3g31280 Fragaria vesca HOM05D007789 ORTHO05D008963 7.0e-65 251.1 261 56.3
FvH4_7g15281 Fragaria vesca HOM05D007789 ORTHO05D008963 4.4e-51 205.3 154 70.1
FAN07G2270 Fragaria x ananassa HOM05D007789 ORTHO05D008963 8.3e-50 201.1 134 76.9
FAN15G1120 Fragaria x ananassa HOM05D007789 ORTHO05D008963 4.1e-49 198.7 125 79.2
FAN25G2614 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.2e-48 197.2 150 70.0
FAN23G2571 Fragaria x ananassa HOM05D007789 ORTHO05D008963 2.7e-48 196.1 219 54.8
FAN13G2010 Fragaria x ananassa HOM05D007789 ORTHO05D008963 7.7e-48 194.5 134 73.9
FAN26G0642 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.3e-47 193.7 134 74.6
FAN22G1355 Fragaria x ananassa HOM05D007789 ORTHO05D008963 8.6e-47 191.0 134 71.6
FAN28G2705 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.1e-46 190.7 135 73.3
FAN09G2193 Fragaria x ananassa HOM05D007789 ORTHO05D008963 3.0e-44 182.6 188 56.4
FAN15G0909 Fragaria x ananassa HOM05D007789 ORTHO05D008963 6.3e-42 174.9 167 61.7
FAN14G2015 Fragaria x ananassa HOM05D000514 ORTHO05D008963 3.1e-41 172.6 117 76.1
FAN19G0335 Fragaria x ananassa HOM05D007789 ORTHO05D008963 4.1e-41 172.2 136 70.6
FAN05G0234 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.0e-39 167.5 99 80.8
FAN21G1666 Fragaria x ananassa HOM05D007789 ORTHO05D008963 2.5e-38 162.9 164 54.3
FAN09G4899 Fragaria x ananassa HOM05D007789 ORTHO05D008963 4.3e-38 162.2 107 79.4
FAN28G2775 Fragaria x ananassa HOM05D007789 ORTHO05D008963 5.6e-38 161.8 112 70.5
FvH4_2g22681 Fragaria vesca HOM05D000514 ORTHO05D008963 2.3e-36 156.4 177 51.4
FAN17G2677 Fragaria x ananassa HOM05D007789 ORTHO05D008963 2.3e-36 156.4 173 56.6
FAN02G3578 Fragaria x ananassa HOM05D007789 ORTHO05D008963 4.0e-36 155.6 191 51.3
FAN21G1650 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.2e-35 154.1 222 47.3
FAN17G1194 Fragaria x ananassa HOM05D007789 ORTHO05D008963 3.4e-35 152.5 105 74.3
FvH4_3g32831 Fragaria vesca HOM05D007789 ORTHO05D008963 4.4e-35 152.1 202 48.5
FAN28G1566 Fragaria x ananassa HOM05D007789 ORTHO05D008963 7.5e-35 151.4 135 62.2
FAN03G1147 Fragaria x ananassa HOM05D007789 ORTHO05D008963 9.8e-35 151.0 134 63.4
FvH4_1g28484 Fragaria vesca HOM05D007789 ORTHO05D008963 1.1e-33 147.5 203 46.3
FAN25G1322 Fragaria x ananassa HOM05D007789 ORTHO05D008963 2.4e-33 146.4 134 61.9
FAN02G3089 Fragaria x ananassa HOM05D007789 ORTHO05D008963 3.2e-33 146.0 134 61.2
FAN28G1300 Fragaria x ananassa HOM05D007789 ORTHO05D008963 5.4e-33 145.2 87 79.3
FvH4_3g31350 Fragaria vesca HOM05D000514 ORTHO05D000222 4.6e-32 142.1 141 57.4
FAN09G2667 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.7e-31 140.2 101 68.3
FAN28G2856 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.5e-30 137.1 112 66.1
FAN28G2459 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.9e-30 136.7 101 71.3
FvH4_3g31114 Fragaria vesca HOM05D007789 ORTHO05D008963 2.5e-30 136.3 199 45.7
FvH4_3g32080 Fragaria vesca HOM05D000514 ORTHO05D000222 7.3e-30 134.8 199 44.7
FAN22G1508 Fragaria x ananassa HOM05D007789 ORTHO05D008963 4.0e-28 129.0 109 61.5
FAN09G2004 Fragaria x ananassa HOM05D007789 ORTHO05D008963 6.8e-28 128.3 92 70.7
FAN25G0253 Fragaria x ananassa HOM05D007789 ORTHO05D008963 2.0e-27 126.7 200 40.5
FAN21G1403 Fragaria x ananassa HOM05D007789 ORTHO05D008963 9.8e-27 124.4 77 76.6
FAN07G0184 Fragaria x ananassa HOM05D007789 ORTHO05D008963 8.3e-26 121.3 90 70.0
FAN08G1363 Fragaria x ananassa HOM05D007789 ORTHO05D008963 8.3e-26 121.3 93 67.7
FAN17G2401 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.4e-25 120.6 82 73.2
FvH4_4g17261 Fragaria vesca HOM05D007789 ORTHO05D008963 9.2e-25 117.9 73 83.6
FvH4_6g34821 Fragaria vesca HOM05D000107 ORTHO05D000062 2.7e-24 116.3 246 35.0
FAN20G1175 Fragaria x ananassa HOM05D007789 ORTHO05D008963 3.5e-24 115.9 72 77.8
FAN21G1088 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.3e-23 114.0 100 62.0
FvH4_6g17652 Fragaria vesca HOM05D000107 ORTHO05D008963 3.3e-22 109.4 153 40.5
FAN05G3176 Fragaria x ananassa HOM05D000514 ORTHO05D000222 9.5e-22 107.8 82 64.6
FAN15G3721 Fragaria x ananassa HOM05D007789 ORTHO05D008963 9.5e-22 107.8 72 75.0
FAN26G0185 Fragaria x ananassa HOM05D007789 ORTHO05D008963 9.5e-22 107.8 122 55.7
FAN10G4205 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.6e-21 107.1 75 73.3
FvH4_3g25630 Fragaria vesca HOM05D000514 ORTHO05D000222 2.1e-21 106.7 200 37.0
FAN22G2318 Fragaria x ananassa HOM05D007789 ORTHO05D008963 2.3e-20 103.2 81 67.9
FvH4_3g31626 Fragaria vesca HOM05D007789 ORTHO05D008963 7.5e-19 98.2 135 47.4
FvH4_5g39772 Fragaria vesca HOM05D007789 ORTHO05D008963 1.3e-18 97.4 107 52.3
FvH4_2g01880 Fragaria vesca HOM05D000514 ORTHO05D000222 1.7e-18 97.1 198 36.4
FvH4_2g03230 Fragaria vesca HOM05D000514 ORTHO05D000222 8.3e-18 94.7 62 74.2
FvH4_3g30861 Fragaria vesca HOM05D007789 ORTHO05D008963 1.4e-17 94.0 183 38.3
FAN25G1187 Fragaria x ananassa HOM05D007789 ORTHO05D008963 2.1e-16 90.1 135 47.4
FvH4_3g32703 Fragaria vesca HOM05D007789 ORTHO05D008963 3.5e-16 89.4 74 68.9
FAN25G3841 Fragaria x ananassa HOM05D000092 ORTHO05D000042 4.6e-16 89.0 110 48.2
FvH4_5g35083 Fragaria vesca HOM05D008794 ORTHO05D013083 6.0e-16 88.6 158 40.5
FAN23G0950 Fragaria x ananassa HOM05D007789 ORTHO05D008963 7.8e-16 88.2 73 65.8
FvH4_1g23671 Fragaria vesca HOM05D000514 ORTHO05D000222 3.0e-15 86.3 102 49.0
FvH4_6g30800 Fragaria vesca HOM05D000514 ORTHO05D008963 3.3e-14 82.8 198 33.3
FvH4_3g14831 Fragaria vesca HOM05D000514 ORTHO05D000222 2.1e-13 80.1 71 64.8
FvH4_3g32113 Fragaria vesca HOM05D007789 ORTHO05D008963 2.1e-13 80.1 154 35.1
FAN25G3662 Fragaria x ananassa HOM05D007789 ORTHO05D008963 2.8e-13 79.7 70 65.7
FvH4_1g20523 Fragaria vesca HOM05D007789 ORTHO05D008963 6.2e-13 78.6 64 68.8
FvH4_1g22430 Fragaria vesca HOM05D002118 ORTHO05D002356 1.4e-12 77.4 73 64.4
FvH4_1g29281 Fragaria vesca HOM05D007789 ORTHO05D046044 4.0e-12 75.9 173 32.4
FAN01G1927 Fragaria x ananassa HOM05D007789 ORTHO05D008963 6.8e-12 75.1 41 80.5
FAN28G2326 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.2e-11 74.3 44 77.3
FvH4_7g07901 Fragaria vesca HOM05D000107 ORTHO05D000062 5.8e-11 72.0 254 26.0
FvH4_3g25312 Fragaria vesca HOM05D000107 ORTHO05D000062 9.9e-11 71.2 204 27.0
FvH4_3g14320 Fragaria vesca HOM05D000107 ORTHO05D002484 1.3e-10 70.9 254 27.2
FAN13G3136 Fragaria x ananassa HOM05D007789 ORTHO05D008963 3.8e-10 69.3 45 75.6
FvH4_3g30614 Fragaria vesca HOM05D000107 ORTHO05D002484 4.9e-10 68.9 232 25.0
FvH4_4g10471 Fragaria vesca HOM05D000107 ORTHO05D000062 4.9e-10 68.9 232 25.0
FvH4_4g12773 Fragaria vesca HOM05D000107 ORTHO05D002484 4.9e-10 68.9 232 25.0
FvH4_5g30952 Fragaria vesca HOM05D000107 ORTHO05D000062 4.9e-10 68.9 232 25.0
FvH4_6g21813 Fragaria vesca HOM05D000107 ORTHO05D000062 6.4e-10 68.6 254 25.6
FvH4_3g33093 Fragaria vesca HOM05D000107 ORTHO05D002484 1.4e-09 67.4 232 24.6
FvH4_3g30391 Fragaria vesca HOM05D008640 ORTHO05D000062 3.2e-09 66.2 197 25.4
FvH4_4g13832 Fragaria vesca HOM05D000107 ORTHO05D002484 3.2e-09 66.2 139 32.4
FAN16G0391 Fragaria x ananassa HOM05D007789 ORTHO05D008963 3.2e-09 66.2 112 42.0
FvH4_2g02785 Fragaria vesca HOM05D000107 ORTHO05D000062 4.1e-09 65.9 232 25.0
FvH4_4g13891 Fragaria vesca HOM05D000107 ORTHO05D000062 4.1e-09 65.9 232 24.1
FvH4_7g13281 Fragaria vesca HOM05D000107 ORTHO05D002484 4.1e-09 65.9 232 24.6
FvH4_4g08593 Fragaria vesca HOM05D007789 ORTHO05D002484 5.4e-09 65.5 54 59.3
Atru.chr6.422 Acer truncatum HOM05D000107 ORTHO05D000062 7.1e-09 65.1 246 26.0
FvH4_6g30772 Fragaria vesca HOM05D000107 ORTHO05D002484 7.1e-09 65.1 254 26.0
FAN03G1415 Fragaria x ananassa HOM05D007789 ORTHO05D008963 9.2e-09 64.7 54 59.3
FvH4_1g24742 Fragaria vesca HOM05D007789 ORTHO05D008963 1.6e-08 63.9 41 68.3
FvH4_4g19121 Fragaria vesca HOM05D000107 ORTHO05D000062 1.6e-08 63.9 254 25.2
FAN06G4470 Fragaria x ananassa HOM05D007789 ORTHO05D046044 1.6e-08 63.9 48 64.6
FAN21G2871 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.6e-08 63.9 120 31.7
FAN27G0625 Fragaria x ananassa HOM05D009580 ORTHO05D002484 1.6e-08 63.9 41 68.3
FvH4_4g14443 Fragaria vesca HOM05D000107 ORTHO05D002484 2.1e-08 63.5 232 24.6
FAN22G0109 Fragaria x ananassa HOM05D000514 ORTHO05D000222 2.7e-08 63.2 54 59.3
FvH4_6g23073 Fragaria vesca HOM05D000107 ORTHO05D000062 3.5e-08 62.8 149 30.2
FAN28G0160 Fragaria x ananassa HOM05D007789 ORTHO05D008963 3.5e-08 62.8 41 65.9
ECA199G0005 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.6e-08 62.4 153 29.4
ECA240G3400 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.6e-08 62.4 153 29.4
ECA240G4180 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.6e-08 62.4 153 29.4
FAN13G2082 Fragaria x ananassa HOM05D008794 ORTHO05D013083 4.6e-08 62.4 124 36.3
FvH4_2g02272 Fragaria vesca HOM05D000107 ORTHO05D002484 7.8e-08 61.6 82 35.4
FAN23G1994 Fragaria x ananassa HOM05D007789 ORTHO05D008963 7.8e-08 61.6 52 69.2
FvH4_7g17991 Fragaria vesca HOM05D000107 ORTHO05D000062 1.0e-07 61.2 254 24.4
FAN28G1728 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.0e-07 61.2 41 65.9
FvH4_1g28422 Fragaria vesca HOM05D000107 ORTHO05D002484 1.3e-07 60.8 142 29.6
FvH4_6g33481 Fragaria vesca HOM05D000107 ORTHO05D002484 1.3e-07 60.8 178 27.5
FAN03G1815 Fragaria x ananassa HOM05D008794 ORTHO05D013083 1.3e-07 60.8 76 46.1
FAN28G2692 Fragaria x ananassa HOM05D008794 ORTHO05D013083 1.3e-07 60.8 72 45.8
ECA233G5459 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.7e-07 60.5 153 28.8
FvH4_7g06092 Fragaria vesca HOM05D000107 ORTHO05D000062 1.7e-07 60.5 118 29.7
FvH4_5g08082 Fragaria vesca HOM05D000107 ORTHO05D002484 2.3e-07 60.1 124 29.0
CANSAT11G0404 Cannabis sativa HOM05D000107 ORTHO05D000062 3.9e-07 59.3 72 37.5
CANSAT64G0850 Cannabis sativa HOM05D000107 ORTHO05D000062 3.9e-07 59.3 72 37.5
FvH4_3g33044 Fragaria vesca HOM05D000107 ORTHO05D002484 3.9e-07 59.3 139 30.2
FvH4_4g20343 Fragaria vesca HOM05D007789 ORTHO05D008963 3.9e-07 59.3 63 49.2
FvH4_6g16751 Fragaria vesca HOM05D007789 ORTHO05D008963 3.9e-07 59.3 59 61.0
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 3.9e-07 59.3 120 30.8
FvH4_3g32261 Fragaria vesca HOM05D000107 ORTHO05D002484 5.1e-07 58.9 139 31.7
FvH4_4g04242 Fragaria vesca HOM05D000107 ORTHO05D002484 5.1e-07 58.9 117 30.8
FvH4_6g20142 Fragaria vesca HOM05D000107 ORTHO05D002484 5.1e-07 58.9 153 26.8
FAN23G0926 Fragaria x ananassa HOM05D008794 ORTHO05D013083 8.7e-07 58.2 134 35.8
PSO675G0591 Papaver somniferum HOM05D000107 ORTHO05D000062 8.7e-07 58.2 79 34.2
Hma1.2p1_1173F.1_g263710 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 1.1e-06 57.8 96 33.3
FvH4_3g16302 Fragaria vesca HOM05D000107 ORTHO05D002484 1.5e-06 57.4 175 27.4
PSO675G5616 Papaver somniferum HOM05D000107 ORTHO05D000062 1.5e-06 57.4 79 34.2
RcHm_v2.0_Chr2g0106121 Rosa chinensis HOM05D000107 ORTHO05D000062 1.5e-06 57.4 78 37.2
CANSAT25G3231 Cannabis sativa HOM05D000107 ORTHO05D000062 1.9e-06 57.0 54 37.0
ECA238G3546 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.9e-06 57.0 59 45.8
FvH4_4g15893 Fragaria vesca HOM05D000107 ORTHO05D000062 1.9e-06 57.0 76 36.8
RcHm_v2.0_Chr4g0403821 Rosa chinensis HOM05D000107 ORTHO05D000062 1.9e-06 57.0 142 27.5
FvH4_3g31651 Fragaria vesca HOM05D007789 ORTHO05D008963 2.5e-06 56.6 194 28.4
FvH4_6g28112 Fragaria vesca HOM05D000107 ORTHO05D002484 3.3e-06 56.2 82 35.4
FAN26G3314 Fragaria x ananassa HOM05D001180 ORTHO05D013083 3.3e-06 56.2 97 39.2
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.3e-06 56.2 95 28.4
Rhsim09G0047500 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.3e-06 56.2 95 28.4
RhsimUnG0181200 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.3e-06 56.2 95 28.4
CSS0012009 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.3e-06 55.8 78 34.6
ECA238G4485 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.3e-06 55.8 55 47.3
FvH4_6g06671 Fragaria vesca HOM05D000107 ORTHO05D002484 4.3e-06 55.8 61 42.6
FvH4_6g43082 Fragaria vesca HOM05D000107 ORTHO05D000062 4.3e-06 55.8 65 44.6
CANSAT01G1656 Cannabis sativa HOM05D000107 ORTHO05D000062 5.6e-06 55.5 92 33.7
FAN02G3634 Fragaria x ananassa HOM05D007789 ORTHO05D008963 5.6e-06 55.5 55 60.0
FAN13G0590 Fragaria x ananassa HOM05D000107 ORTHO05D002484 5.6e-06 55.5 82 35.4
Os02g0583300 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 5.6e-06 55.5 79 32.9
PSO017G6416 Papaver somniferum HOM05D000107 ORTHO05D000062 5.6e-06 55.5 79 32.9
FvH4_4g14562 Fragaria vesca HOM05D000107 ORTHO05D002484 7.3e-06 55.1 117 29.1
FAN13G0454 Fragaria x ananassa HOM05D000107 ORTHO05D002484 7.3e-06 55.1 57 42.1
FAN28G1809 Fragaria x ananassa HOM05D000107 ORTHO05D002484 7.3e-06 55.1 57 42.1
CANSAT35G0031 Cannabis sativa HOM05D000107 ORTHO05D000062 9.6e-06 54.7 157 31.8
CANSAT80G2014 Cannabis sativa HOM05D000107 ORTHO05D000062 9.6e-06 54.7 78 33.3
FvH4_1g22122 Fragaria vesca HOM05D000107 ORTHO05D002484 9.6e-06 54.7 139 29.5
FvH4_3g22803 Fragaria vesca HOM05D000514 ORTHO05D000222 9.6e-06 54.7 55 61.8
FAN03G2920 Fragaria x ananassa HOM05D000107 ORTHO05D002484 9.6e-06 54.7 80 36.2
FAN20G0108 Fragaria x ananassa HOM05D000107 ORTHO05D002484 9.6e-06 54.7 73 38.4
FAN21G3959 Fragaria x ananassa HOM05D000107 ORTHO05D002484 9.6e-06 54.7 73 38.4
FAN26G1783 Fragaria x ananassa HOM05D000107 ORTHO05D002484 9.6e-06 54.7 73 38.4


User provided reference genes

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