Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 3.5e-91 338.2 162 100.0
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.5e-91 338.2 162 100.0
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.5e-91 338.2 162 100.0
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 6.2e-88 327.4 156 100.0
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 2.4e-87 325.5 158 97.5
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 6.4e-77 290.8 157 84.1
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 5.4e-76 287.7 160 83.8
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 7.1e-76 287.3 160 84.4
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.2e-75 286.6 155 85.8
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.0e-74 283.5 155 85.8
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 1.0e-74 283.5 160 81.9
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.0e-74 283.5 160 81.9
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 2.3e-74 282.3 156 82.7
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.0e-74 282.0 157 79.6
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 3.9e-74 281.6 155 85.2
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 3.9e-74 281.6 154 83.1
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 8.7e-74 280.4 160 82.5
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 1.5e-73 279.6 158 81.6
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 1.9e-73 279.3 155 83.2
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.9e-73 279.3 156 83.3
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 2.5e-73 278.9 154 82.5
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 3.3e-73 278.5 157 81.5
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 3.3e-73 278.5 160 81.2
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 3.3e-73 278.5 160 78.8
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 4.3e-73 278.1 159 80.5
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 7.4e-73 277.3 160 80.0
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 7.4e-73 277.3 153 84.3
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 7.4e-73 277.3 160 79.4
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 1.3e-72 276.6 160 79.4
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 1.3e-72 276.6 160 79.4
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 1.6e-72 276.2 158 80.4
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 1.6e-72 276.2 162 78.4
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 2.1e-72 275.8 152 83.6
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 2.8e-72 275.4 157 80.3
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 3.6e-72 275.0 157 79.6
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 4.8e-72 274.6 158 78.5
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 4.8e-72 274.6 158 78.5
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 4.8e-72 274.6 157 80.3
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 4.8e-72 274.6 157 79.0
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 6.2e-72 274.2 160 80.6
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 6.2e-72 274.2 160 80.6
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.1e-71 273.5 160 80.6
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 1.1e-71 273.5 157 81.5
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 1.4e-71 273.1 155 80.6
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 1.8e-71 272.7 160 80.0
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 1.8e-71 272.7 152 85.5
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 1.8e-71 272.7 157 79.0
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 2.4e-71 272.3 161 80.1
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 4.0e-71 271.6 147 84.4
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 4.0e-71 271.6 158 77.8
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 4.0e-71 271.6 151 83.4
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 5.3e-71 271.2 158 77.2
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 6.9e-71 270.8 158 77.2
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 6.9e-71 270.8 147 84.4
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 6.9e-71 270.8 152 82.9
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 9.0e-71 270.4 158 76.6
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 9.0e-71 270.4 160 78.1
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.2e-70 270.0 151 82.8
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.2e-70 270.0 157 80.3
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 1.5e-70 269.6 158 77.2
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 2.6e-70 268.9 158 76.6
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 2.6e-70 268.9 160 78.1
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 3.4e-70 268.5 158 77.2
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 4.5e-70 268.1 157 77.7
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 4.5e-70 268.1 157 77.7
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 5.8e-70 267.7 147 83.0
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 7.6e-70 267.3 156 79.5
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 9.9e-70 266.9 158 77.8
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 9.9e-70 266.9 158 75.9
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.3e-69 266.5 158 75.9
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.3e-69 266.5 154 79.9
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 1.3e-69 266.5 154 79.9
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.9e-69 265.4 158 75.3
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 2.9e-69 265.4 161 77.0
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 3.8e-69 265.0 158 75.9
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 3.8e-69 265.0 161 75.8
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 4.9e-69 264.6 154 79.2
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 6.4e-69 264.2 155 78.1
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 6.4e-69 264.2 160 76.2
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 8.4e-69 263.8 166 73.5
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 1.9e-68 262.7 164 73.8
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 5.5e-68 261.2 157 75.2
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 1.2e-67 260.0 154 76.0
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 4.6e-67 258.1 155 76.8
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 1.3e-66 256.5 137 83.9
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 1.3e-66 256.5 211 60.7
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 1.8e-66 256.1 149 77.2
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 2.3e-66 255.8 161 72.7
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 3.9e-66 255.0 157 77.1
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 6.7e-66 254.2 151 76.2
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 7.4e-65 250.8 160 80.6
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 7.4e-65 250.8 157 74.5
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 9.6e-65 250.4 151 74.8
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 2.1e-64 249.2 158 77.8
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 1.1e-63 246.9 160 75.0
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 1.4e-63 246.5 148 75.0
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 2.4e-63 245.7 131 86.3
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 4.0e-63 245.0 138 79.7
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 9.0e-63 243.8 135 82.2
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 1.2e-62 243.4 158 73.4
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 5.8e-62 241.1 156 69.2
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 1.0e-61 240.4 134 81.3
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 9.3e-60 233.8 132 79.5
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.5e-57 226.5 125 82.4
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 1.6e-56 223.0 148 73.0
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 8.2e-56 220.7 139 72.7
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.4e-55 219.9 118 85.6
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 7.2e-52 207.6 113 83.2
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 9.3e-52 207.2 145 61.4
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 9.3e-52 207.2 182 58.8
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 2.1e-51 206.1 111 84.7
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 1.0e-50 203.8 142 60.6
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 8.7e-50 200.7 142 59.9
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 1.1e-49 200.3 114 82.5
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 1.1e-49 200.3 113 79.6
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 2.4e-47 192.6 105 82.9
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 2.0e-46 189.5 99 82.8
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.8e-45 185.3 132 62.9
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 4.2e-44 181.8 95 85.3
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 4.5e-38 161.8 171 49.7
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 7.7e-38 161.0 135 62.2
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 1.0e-37 160.6 98 73.5
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 2.5e-36 156.0 152 56.6
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 8.8e-34 147.5 84 83.3
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 1.4e-31 140.2 85 78.8
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 9.4e-28 127.5 73 80.8
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 1.5e-20 103.6 52 84.6
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 1.8e-15 86.7 60 66.7
C02p14450 Brassica napus HOM05D006321 ORTHO05D007929 1.4e-07 60.5 71 45.1


User provided reference genes

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