Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1271 Fragaria x ananassa HOM05D038641 ORTHO05D035590 3.1e-41 171.4 89 100.0
FvH4_6g15641 Fragaria vesca HOM05D038641 ORTHO05D035590 6.5e-23 110.5 90 70.0
FvH4_6g21642 Fragaria vesca HOM05D038641 ORTHO05D035590 2.6e-19 98.6 97 60.8
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 5.5e-14 80.9 65 72.3
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 5.5e-14 80.9 65 72.3
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 5.5e-14 80.9 65 72.3
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 2.8e-13 78.6 65 70.8
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.8e-13 78.6 65 70.8
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.8e-13 78.6 65 70.8
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 2.8e-13 78.6 65 70.8
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 2.4e-09 65.5 65 58.5
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 4.1e-09 64.7 66 57.6
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 9.2e-09 63.5 65 53.8
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 9.2e-09 63.5 65 53.8
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 9.2e-09 63.5 65 53.8
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 9.2e-09 63.5 65 53.8
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 9.2e-09 63.5 65 52.3
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 9.2e-09 63.5 65 55.4
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 9.2e-09 63.5 65 55.4
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 1.2e-08 63.2 65 56.9
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 1.6e-08 62.8 65 50.8
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 1.6e-08 62.8 44 68.2
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 2.0e-08 62.4 65 53.8
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 2.0e-08 62.4 65 53.8
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 2.0e-08 62.4 65 53.8
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 2.0e-08 62.4 65 52.3
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 2.0e-08 62.4 65 52.3
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 2.7e-08 62.0 65 52.3
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 2.7e-08 62.0 65 53.8
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 3.5e-08 61.6 65 53.8
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 3.5e-08 61.6 65 52.3
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 5.9e-08 60.8 65 53.8
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 7.8e-08 60.5 47 61.7
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 7.8e-08 60.5 65 52.3
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 7.8e-08 60.5 65 50.8
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 1.0e-07 60.1 65 50.8
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 1.0e-07 60.1 65 50.8
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 1.3e-07 59.7 65 47.7
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 1.3e-07 59.7 65 49.2
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 1.7e-07 59.3 65 53.8
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 1.7e-07 59.3 65 52.3
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.7e-07 59.3 63 52.4
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 1.7e-07 59.3 63 52.4
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 1.7e-07 59.3 88 43.2
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 2.3e-07 58.9 44 63.6
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 2.9e-07 58.5 65 52.3
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 2.9e-07 58.5 88 44.3
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 2.9e-07 58.5 65 50.8
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 2.9e-07 58.5 66 51.5
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 5.0e-07 57.8 50 58.0
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 5.0e-07 57.8 66 51.5
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 5.0e-07 57.8 66 51.5
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 6.6e-07 57.4 65 50.8
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 6.6e-07 57.4 65 47.7
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 6.6e-07 57.4 65 47.7
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 6.6e-07 57.4 66 48.5
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 8.6e-07 57.0 55 54.5
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 8.6e-07 57.0 65 47.7
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 8.6e-07 57.0 65 49.2
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 1.1e-06 56.6 65 49.2
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 1.1e-06 56.6 63 49.2
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 1.1e-06 56.6 65 41.5
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 1.1e-06 56.6 66 48.5
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 1.1e-06 56.6 66 48.5
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 1.5e-06 56.2 63 50.8
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 1.5e-06 56.2 65 47.7
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 1.9e-06 55.8 65 46.2
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 1.9e-06 55.8 65 46.2
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 2.5e-06 55.5 66 48.5
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 2.5e-06 55.5 66 48.5
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 2.5e-06 55.5 66 48.5
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 2.5e-06 55.5 65 47.7
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 2.5e-06 55.5 63 46.0
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 3.3e-06 55.1 65 47.7
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 3.3e-06 55.1 65 47.7
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 3.3e-06 55.1 65 47.7
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 5.6e-06 54.3 65 47.7
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 5.6e-06 54.3 65 47.7
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 5.6e-06 54.3 65 46.2
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 7.3e-06 53.9 50 66.0
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 9.5e-06 53.5 66 47.0
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 9.5e-06 53.5 66 47.0
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 9.5e-06 53.5 66 47.0
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 9.5e-06 53.5 66 47.0


User provided reference genes

Program Settings