Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1263 Fragaria x ananassa HOM05D005327 ORTHO05D006655 2.7e-163 578.6 287 100.0
FAN07G1666 Fragaria x ananassa HOM05D005327 ORTHO05D006655 4.5e-158 561.2 287 97.9
FvH4_4g06430 Fragaria vesca HOM05D005327 ORTHO05D006655 8.5e-157 557.0 285 97.5
FAN12G0339 Fragaria x ananassa HOM05D005327 ORTHO05D006655 6.1e-155 550.8 285 96.8
RcHm_v2.0_Chr4g0398191 Rosa chinensis HOM05D005327 ORTHO05D006655 2.6e-145 518.8 285 90.2
Prupe.1G067200 Prunus persica HOM05D005327 ORTHO05D006655 2.3e-130 469.2 287 81.9
MD16G1240500 Malus domestica HOM05D005327 ORTHO05D006655 4.4e-129 464.9 285 80.7
MD13G1235800 Malus domestica HOM05D005327 ORTHO05D006655 4.6e-126 454.9 285 78.6
TAR383G0919 Trochodendron aralioides HOM05D005327 ORTHO05D006655 1.2e-113 413.7 293 71.3
Dinv02614 Davidia involucrata HOM05D005327 ORTHO05D006655 8.3e-112 407.5 293 70.0
Duzib170G0396 Durio zibethinus HOM05D005327 ORTHO05D006655 1.7e-109 399.8 289 68.9
Actinidia02486 Actinidia chinensis HOM05D005327 ORTHO05D006655 1.9e-108 396.4 287 69.3
ClCG06G013980 Citrullus lanatus HOM05D005327 ORTHO05D006655 9.5e-108 394.0 293 67.9
Hma1.2p1_0022F.1_g014820 Hydrangea macrophylla HOM05D005327 ORTHO05D006655 9.5e-108 394.0 294 67.3
MELO3C017398.2 Cucumis melo HOM05D005327 ORTHO05D006655 2.8e-107 392.5 293 67.6
Gohir.D05G002100 Gossypium hirsutum HOM05D005327 ORTHO05D006655 6.8e-106 387.9 293 67.2
Gorai.009G002000 Gossypium raimondii HOM05D005327 ORTHO05D006655 6.8e-106 387.9 293 67.2
GSVIVG01035172001 Vitis vinifera HOM05D005327 ORTHO05D006655 6.8e-106 387.9 293 66.6
DCAR_019096 Daucus carota HOM05D005327 ORTHO05D006655 1.2e-105 387.1 295 67.1
CsaV3_1G032190 Cucumis sativus L. HOM05D005327 ORTHO05D006655 1.5e-105 386.7 293 67.6
Rhsim01G0113000 Rhododendron simsii HOM05D005327 ORTHO05D006655 2.6e-105 386.0 293 66.9
TWI34G0155 Tripterygium wilfordii HOM05D005327 ORTHO05D006655 3.4e-105 385.6 291 67.0
Cpa.g.sc115.46 Carica papaya HOM05D005327 ORTHO05D006655 7.6e-105 384.4 293 65.9
Lj4g0024487 Lotus japonicus HOM05D005327 ORTHO05D006655 3.8e-104 382.1 292 64.0
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 2.4e-103 379.4 293 65.5
CiPaw.15G154300 Carya illinoinensis HOM05D005327 ORTHO05D006655 9.2e-103 377.5 308 64.9
Migut.J00826 Erythranthe guttata HOM05D005327 ORTHO05D006655 2.7e-102 375.9 286 66.8
Hma1.2p1_0022F.1_g014810 Hydrangea macrophylla HOM05D005327 ORTHO05D006655 2.7e-102 375.9 283 67.5
PSO063G6174 Papaver somniferum HOM05D005327 ORTHO05D006655 2.7e-102 375.9 293 66.6
Aqoxy7G02706 Aquilegia oxysepala HOM05D005327 ORTHO05D006655 4.6e-102 375.2 290 65.9
PGR044G1838 Punica granatum HOM05D005327 ORTHO05D006655 4.6e-102 375.2 293 66.6
PSO170G4496 Papaver somniferum HOM05D005327 ORTHO05D006655 1.3e-101 373.6 293 65.9
SGA_v2.0_scaffold31G12725 Striga asiatica HOM05D005327 ORTHO05D006655 1.3e-101 373.6 286 65.7
Potri.006G070500 Populus trichocarpa HOM05D005327 ORTHO05D006655 1.7e-101 373.2 292 65.8
Ciclev10008332m.g Citrus clementina HOM05D005327 ORTHO05D006655 2.3e-101 372.9 293 64.5
Glyma.08G028600 Glycine max HOM05D005327 ORTHO05D006655 2.3e-101 372.9 287 63.8
Sed0022639 Sechium edule HOM05D005327 ORTHO05D006655 3.9e-101 372.1 278 68.3
HanXRQChr03g0067401 Helianthus annuus HOM05D005327 ORTHO05D006655 6.6e-101 371.3 293 64.8
Nitab4.5_0004947g0030 Nicotiana tabacum HOM05D005327 ORTHO05D006655 6.6e-101 371.3 315 62.2
Phvul.002G303800 Phaseolus vulgaris HOM05D005327 ORTHO05D006655 2.5e-100 369.4 287 63.1
Atru.chr7.986 Acer truncatum HOM05D005327 ORTHO05D006655 3.3e-100 369.0 291 64.3
Glyma.05G222000 Glycine max HOM05D005327 ORTHO05D006655 4.3e-100 368.6 287 63.1
Psat7g020320 Pisum sativum HOM05D005327 ORTHO05D006655 4.3e-100 368.6 288 63.9
Aa31LG3G3560 Aethionema arabicum HOM05D005327 ORTHO05D006655 5.6e-100 368.2 286 65.4
Lalb_Chr05g0223671 Lupinus albus HOM05D005327 ORTHO05D006655 9.6e-100 367.5 292 63.7
Eucgr.C02197 Eucalyptus grandis HOM05D005327 ORTHO05D006655 1.2e-99 367.1 296 65.2
THA.LOC104826954 Tarenaya hassleriana HOM05D005327 ORTHO05D006655 1.2e-99 367.1 286 66.1
Lalb_Chr09g0331881 Lupinus albus HOM05D005327 ORTHO05D006655 1.6e-99 366.7 293 64.2
Lsat_1_v5_gn_7_59540 Lactuca sativa HOM05D005327 ORTHO05D006655 2.8e-99 365.9 287 64.5
Manes.15G099200 Manihot esculenta HOM05D005327 ORTHO05D006655 2.8e-99 365.9 290 64.5
Thecc.09G189900 Theobroma cacao HOM05D005327 ORTHO05D006655 8.1e-99 364.4 293 65.5
Medtr8g101540 Medicago truncatula HOM05D005327 ORTHO05D006655 1.1e-98 364.0 293 61.4
Haze_19034 Corylus avellana HOM05D005327 ORTHO05D006655 5.3e-98 361.7 286 65.0
Nn8g41033 Nelumbo nucifera HOM05D005327 ORTHO05D006655 1.2e-97 360.5 291 64.9
Ca_17407_v3 Cicer arietinum L. HOM05D005327 ORTHO05D006655 9.9e-97 357.5 293 61.1
AT3G10700 Arabidopsis thaliana HOM05D005327 ORTHO05D006655 1.3e-96 357.1 286 64.7
AL3G22170 Arabidopsis lyrata HOM05D005327 ORTHO05D006655 3.8e-96 355.5 286 64.3
Solyc07g014640.3 Solanum lycopersicum HOM05D005327 ORTHO05D006655 8.4e-96 354.4 262 69.8
MSTRG.19391 Avicennia marina HOM05D005327 ORTHO05D006655 1.4e-95 353.6 288 62.5
A05p38490 Brassica napus HOM05D005327 ORTHO05D006655 1.9e-95 353.2 281 64.1
Thhalv10020814m.g Eutrema salsugineum HOM05D005327 ORTHO05D006655 2.4e-95 352.8 281 64.1
BraA05t22640Z Brassica rapa HOM05D005327 ORTHO05D006655 3.2e-95 352.4 281 64.1
Carub.0003s0993 Capsella rubella HOM05D005327 ORTHO05D006655 7.1e-95 351.3 286 63.6
ATR0626G140 Amborella trichopoda HOM05D005327 ORTHO05D006655 1.2e-94 350.5 287 62.0
C05p57390 Brassica napus HOM05D005327 ORTHO05D006655 1.2e-94 350.5 281 63.7
ECA240G0405 Erigeron canadensis HOM05D005327 ORTHO05D006655 3.0e-93 345.9 268 66.0
Ah.11g044360 Amaranthus hybridus HOM05D005327 ORTHO05D006655 6.6e-93 344.7 291 62.2
Sp3g09020 Schrenkiella parvula HOM05D005327 ORTHO05D006655 8.7e-93 344.4 281 63.7
AUR62021329 Chenopodium quinoa HOM05D005327 ORTHO05D006655 3.3e-92 342.4 293 62.1
Sc14g0001350 Simmondsia chinensis HOM05D005327 ORTHO05D006655 3.3e-92 342.4 276 63.4
AUR62033244 Chenopodium quinoa HOM05D005327 ORTHO05D006655 9.6e-92 340.9 293 62.1
CARHR085280 Cardamine hirsuta HOM05D005327 ORTHO05D006655 2.1e-91 339.7 269 66.5
Sabra06G0052400 Salix brachista HOM05D005327 ORTHO05D006655 2.1e-91 339.7 305 59.3
unitig_749.g14193 Utricularia gibba HOM05D005327 ORTHO05D006655 1.8e-90 336.7 283 64.0
Hund09044 Selenicereus undatus HOM05D005327 ORTHO05D006655 1.4e-87 327.0 325 55.4
Lj5A713T18 Lonicera japonica HOM05D005327 ORTHO05D006655 5.4e-87 325.1 226 71.7
SEGI_37801 Sequoiadendron giganteum HOM05D005327 ORTHO05D006655 1.6e-86 323.6 285 57.2
arahy.Tifrunner.gnm1.ann1.BX5CIC Arachis hypogaea HOM05D005327 ORTHO05D006655 2.1e-86 323.2 274 60.2
arahy.Tifrunner.gnm1.ann1.X8NFG9 Arachis hypogaea HOM05D005327 ORTHO05D006655 2.7e-86 322.8 274 59.9
Nitab4.5_0000053g0140 Nicotiana tabacum HOM05D005327 ORTHO05D006655 2.5e-84 316.2 299 57.2
vmacro20765 Vaccinium macrocarpon HOM05D005327 ORTHO05D006655 5.6e-84 315.1 364 51.4
Sopen07g005500 Solanum pennellii HOM05D005327 ORTHO05D006655 5.3e-82 308.5 238 68.1
CANSAT01G0668 Cannabis sativa HOM05D005327 ORTHO05D006655 6.9e-82 308.1 220 69.1
Os04g0608100 Oryza sativa ssp. japonica HOM05D005327 ORTHO05D006655 6.9e-82 308.1 282 57.4
Zm00001eb071360 Zea mays HOM05D005327 ORTHO05D006655 4.2e-79 298.9 284 53.5
Peaxi162Scf00889g00111 Petunia axillaris HOM05D005327 ORTHO05D006655 4.6e-78 295.4 316 53.5
Pp3c23_15130 Physcomitrium patens HOM05D005327 ORTHO05D006655 1.3e-77 293.9 289 56.1
EL10Ac8g18314 Beta vulgaris HOM05D005327 ORTHO05D006655 9.6e-76 287.7 399 45.9
CDE06G0639 Ceratophyllum demersum HOM05D005327 ORTHO05D006655 2.1e-75 286.6 284 56.7
HPP92_000193 Vanilla planifolia HOM05D005327 ORTHO05D006655 3.7e-75 285.8 283 55.1
vmacro20791 Vaccinium macrocarpon HOM05D005327 ORTHO05D006655 2.4e-74 283.1 210 68.6
unitig_77.g31482 Utricularia gibba HOM05D005327 ORTHO05D006655 7.6e-73 278.1 285 55.1
SalBow6G3212 Salvia bowleyana HOM05D005327 ORTHO05D006655 6.7e-69 265.0 354 46.0
CBR_g4778 Chara braunii HOM05D005327 ORTHO05D000002 1.8e-66 256.9 311 48.2
Mapoly0128s0021 Marchantia polymorpha HOM05D005327 ORTHO05D006655 5.3e-66 255.4 280 50.0
TPR.G25461 Trifolium pratense HOM05D005327 ORTHO05D006655 1.5e-65 253.8 218 60.1
VMungo0251G1981 Vigna mungo HOM05D005327 ORTHO05D006655 3.4e-65 252.7 446 38.6
BolC5t34395H Brassica oleracea HOM05D005327 ORTHO05D006655 9.4e-63 244.6 213 60.6
Sed0024331 Sechium edule HOM05D005327 ORTHO05D006655 1.7e-59 233.8 248 53.6
SMO356G0298 Selaginella moellendorffii HOM05D005327 ORTHO05D006655 1.4e-58 230.7 270 45.6
Oeu011821.1 Olea europaea HOM05D005327 ORTHO05D006655 1.3e-56 224.2 163 68.7
Gohir.A05G001832 Gossypium hirsutum HOM05D005327 ORTHO05D006655 1.4e-53 214.2 162 64.8
AagrBONN_evm.TU.Sc2ySwM_344.300 Anthoceros agrestis HOM05D005327 ORTHO05D006655 1.1e-52 211.1 263 47.1
CAN.G33.6 Capsicum annuum HOM05D005327 ORTHO05D006655 6.3e-51 205.3 280 43.9
HPP92_000244 Vanilla planifolia HOM05D005327 ORTHO05D006655 3.0e-45 186.4 158 59.5
QL11p009789 Quercus lobata HOM05D005327 ORTHO05D006655 4.1e-42 176.0 227 47.1
COL.COLO4_23452 Corchorus olitorius HOM05D005327 ORTHO05D006655 6.5e-40 168.7 180 49.4
Solyc09g031880.3 Solanum lycopersicum HOM05D005327 ORTHO05D006655 4.7e-38 162.5 214 48.6
PGR044G0615 Punica granatum HOM05D005327 ORTHO05D006655 2.6e-36 156.8 166 53.6
MCO11G047 Micromonas commoda HOM05D005327 ORTHO05D006655 1.4e-34 151.0 289 34.6
Sopen00g011970 Solanum pennellii HOM05D005327 ORTHO05D006655 2.4e-34 150.2 124 64.5
Thhalv10026961m.g Eutrema salsugineum HOM05D005327 ORTHO05D006655 5.0e-32 142.5 118 65.3
QL11p009732 Quercus lobata HOM05D005327 ORTHO05D006655 7.7e-25 118.6 73 78.1
QL11p009810 Quercus lobata HOM05D005327 ORTHO05D006655 2.9e-24 116.7 73 74.0
Sopen09g026020 Solanum pennellii HOM05D005327 ORTHO05D006655 4.2e-23 112.8 76 72.4
TPR.G2647 Trifolium pratense HOM05D005327 ORTHO05D006655 9.5e-23 111.7 73 69.9
Gohir.A05G001766 Gossypium hirsutum HOM05D005327 ORTHO05D006655 1.0e-21 108.2 76 69.7
Sabra18G0112000 Salix brachista HOM05D005327 ORTHO05D006655 1.0e-16 91.7 64 67.2
BcaC05g29437 Brassica carinata HOM05D005327 ORTHO05D006655 6.8e-13 79.0 73 56.2
SHI03098 Sapria himalayana HOM05D005327 ORTHO05D006655 2.2e-11 73.9 45 66.7
vmacro20790 Vaccinium macrocarpon HOM05D005327 ORTHO05D006655 5.4e-10 69.3 44 79.5
arahy.Tifrunner.gnm1.ann1.TSV22Z Arachis hypogaea HOM05D026511 ORTHO05D038857 1.0e-08 65.1 45 64.4
CSS0006230 Camellia sinensis var. sinensis HOM05D005327 ORTHO05D006655 2.5e-07 60.5 33 84.8
QL11p009748 Quercus lobata HOM05D005327 ORTHO05D000004 2.5e-07 60.5 59 54.2
SMO340G0013 Selaginella moellendorffii HOM05D003564 ORTHO05D005332 2.8e-06 57.0 262 25.6
Solyc09g031890.3 Solanum lycopersicum HOM05D005327 ORTHO05D006655 2.8e-06 57.0 58 55.2
SHI03087 Sapria himalayana HOM05D005327 ORTHO05D006655 3.6e-06 56.6 58 53.4


User provided reference genes

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