Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.8e-36 156.4 240 100.0
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.0e-34 150.2 240 98.3
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.9e-33 146.4 108 98.1
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 5.5e-32 142.1 240 96.7
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.6e-31 140.6 108 95.4
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 2.8e-28 129.8 240 93.3
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 6.9e-19 98.6 113 72.6
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 5.9e-18 95.5 113 72.6
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 3.8e-17 92.8 110 60.9
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 8.5e-17 91.7 110 65.5
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 1.1e-16 91.3 107 70.1
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 4.2e-16 89.4 110 50.9
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 5.5e-16 89.0 110 50.0
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 5.5e-16 89.0 110 63.6
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 9.4e-16 88.2 109 61.5
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 9.4e-16 88.2 116 65.5
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 1.2e-15 87.8 110 64.5
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 1.6e-15 87.4 107 69.2
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 2.1e-15 87.0 110 49.1
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 2.7e-15 86.7 108 62.0
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 3.6e-15 86.3 110 64.5
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 3.6e-15 86.3 113 53.1
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 3.6e-15 86.3 115 60.0
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 3.6e-15 86.3 97 62.9
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 4.7e-15 85.9 113 46.0
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 4.7e-15 85.9 113 46.0
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 4.7e-15 85.9 113 46.0
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 4.7e-15 85.9 110 48.2
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 6.1e-15 85.5 114 61.4
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 7.9e-15 85.1 112 49.1
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.0e-14 84.7 106 65.1
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 1.4e-14 84.3 101 67.3
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 1.4e-14 84.3 110 70.9
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 1.8e-14 84.0 114 59.6
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 1.8e-14 84.0 113 62.8
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 1.8e-14 84.0 114 46.5
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 2.3e-14 83.6 106 60.4
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 2.3e-14 83.6 104 68.3
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 2.3e-14 83.6 112 46.4
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 3.0e-14 83.2 116 47.4
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 3.0e-14 83.2 110 67.3
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 3.9e-14 82.8 112 67.9
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 3.9e-14 82.8 112 58.9
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 5.1e-14 82.4 104 45.2
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 5.1e-14 82.4 110 65.5
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 5.1e-14 82.4 107 58.9
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 6.7e-14 82.0 100 70.0
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 6.7e-14 82.0 108 48.1
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 8.8e-14 81.6 113 62.8
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 1.1e-13 81.3 115 66.1
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 1.1e-13 81.3 111 48.6
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 1.5e-13 80.9 103 62.1
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 2.0e-13 80.5 105 47.6
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.6e-13 80.1 106 58.5
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 2.6e-13 80.1 114 48.2
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 2.6e-13 80.1 100 70.0
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 3.3e-13 79.7 105 45.7
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 3.3e-13 79.7 115 59.1
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 4.4e-13 79.3 115 60.9
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 4.4e-13 79.3 109 65.1
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 4.4e-13 79.3 108 62.0
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 5.7e-13 79.0 110 57.3
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 5.7e-13 79.0 115 60.0
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 5.7e-13 79.0 110 57.3
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 7.4e-13 78.6 110 57.3
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 9.7e-13 78.2 113 59.3
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 9.7e-13 78.2 118 62.7
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 1.3e-12 77.8 111 62.2
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 2.2e-12 77.0 109 61.5
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 2.2e-12 77.0 113 64.6
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 2.8e-12 76.6 116 44.0
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 4.8e-12 75.9 79 57.0
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 6.3e-12 75.5 118 57.6
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 8.2e-12 75.1 111 55.9
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 8.2e-12 75.1 106 61.3
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 8.2e-12 75.1 106 66.0
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 3.1e-11 73.2 136 38.2
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 5.3e-11 72.4 98 64.3
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 6.9e-11 72.0 113 61.1
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.2e-10 71.2 116 42.2
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.2e-10 71.2 100 46.0
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 2.0e-10 70.5 104 60.6
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 2.0e-10 70.5 103 64.1
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.6e-10 70.1 102 44.1
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 2.6e-10 70.1 102 44.1
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 5.9e-10 68.9 102 43.1
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 7.7e-10 68.6 69 55.1
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 1.0e-09 68.2 105 52.4
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 1.0e-09 68.2 100 62.0
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 1.0e-09 68.2 109 51.4
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.8e-09 66.2 69 56.5
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 5.0e-09 65.9 111 59.5
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 6.5e-09 65.5 66 53.0
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 6.5e-09 65.5 69 56.5
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 8.5e-09 65.1 69 53.6
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.1e-08 64.7 69 56.5
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.1e-08 64.7 69 56.5
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 2.5e-08 63.5 67 49.3
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 1.6e-07 60.8 115 56.5
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 2.1e-07 60.5 107 39.3
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 2.1e-07 60.5 56 55.4
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 6.1e-07 58.9 107 40.2
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 1.4e-06 57.8 110 34.5
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 3.9e-06 56.2 66 50.0
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 8.8e-06 55.1 111 38.7


User provided reference genes

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