Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 4.5e-225 784.3 391 100.0
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 4.1e-218 761.1 391 97.2
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 1.7e-195 686.0 373 90.3
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 5.0e-192 674.5 391 89.3
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 1.0e-168 597.0 386 76.9
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 3.0e-165 585.5 390 74.6
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 3.9e-152 542.0 384 70.1
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 6.6e-144 514.6 393 64.6
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 9.5e-143 510.8 377 67.4
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 9.5e-143 510.8 391 65.5
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 4.7e-142 508.4 397 65.5
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 2.3e-141 506.1 396 64.6
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 3.1e-141 505.8 383 65.8
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 5.2e-141 505.0 371 67.7
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 2.6e-140 502.7 393 63.1
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 4.4e-140 501.9 393 63.6
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 1.9e-138 496.5 387 64.3
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 9.2e-138 494.2 390 63.1
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.2e-137 493.8 376 65.4
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 7.8e-137 491.1 387 63.3
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 7.8e-137 491.1 387 63.8
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 9.6e-135 484.2 368 65.5
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 2.1e-134 483.0 245 98.8
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 4.7e-134 481.9 393 63.4
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 6.2e-134 481.5 378 65.3
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 1.1e-133 480.7 396 60.9
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 1.8e-133 479.9 392 62.0
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 1.8e-133 479.9 361 64.5
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 4.0e-133 478.8 380 62.9
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 5.2e-133 478.4 379 63.9
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 5.2e-133 478.4 393 62.6
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 4.4e-132 475.3 375 65.3
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 5.8e-132 474.9 391 61.9
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 7.6e-132 474.6 397 61.2
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 7.6e-132 474.6 385 63.1
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.3e-131 473.8 385 61.3
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 2.2e-131 473.0 382 60.7
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 1.9e-130 469.9 382 62.6
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 3.2e-130 469.2 375 60.8
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 5.4e-130 468.4 370 64.1
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 7.1e-130 468.0 370 63.5
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 9.3e-130 467.6 363 64.7
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 4.6e-129 465.3 370 64.3
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.3e-126 457.2 386 60.1
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 2.4e-125 453.0 322 68.9
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 3.1e-125 452.6 373 62.7
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 2.0e-124 449.9 394 58.4
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 3.4e-124 449.1 393 59.0
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 9.9e-124 447.6 356 62.1
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 2.1e-121 439.9 387 58.4
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 2.7e-121 439.5 368 62.2
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 3.9e-120 435.6 372 62.4
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 6.6e-120 434.9 385 58.4
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 1.1e-119 434.1 394 57.9
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.3e-118 430.6 376 61.2
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 3.6e-118 429.1 375 60.8
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 4.8e-118 428.7 369 61.8
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 1.1e-117 427.6 370 56.5
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 2.4e-117 426.4 371 60.9
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 2.0e-116 423.3 392 54.8
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 1.3e-115 420.6 369 61.8
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 2.2e-115 419.9 296 68.6
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 2.2e-115 419.9 392 54.6
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 3.8e-115 419.1 375 58.9
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 3.8e-115 419.1 434 53.5
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 4.9e-115 418.7 368 58.7
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 1.4e-114 417.2 358 57.8
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 2.4e-114 416.4 357 58.5
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 1.6e-113 413.7 348 59.5
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 4.6e-113 412.1 374 57.8
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 6.0e-113 411.8 360 56.9
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 3.9e-112 409.1 360 57.5
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 1.9e-111 406.8 392 52.8
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 3.3e-111 406.0 387 54.3
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 4.3e-111 405.6 360 55.3
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.6e-110 403.7 384 56.2
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 2.1e-110 403.3 382 55.2
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 2.4e-109 399.8 360 57.2
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 1.5e-108 397.1 359 55.4
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 2.0e-108 396.7 360 56.7
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 2.2e-107 393.3 368 55.4
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 1.1e-106 391.0 342 59.1
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 1.9e-106 390.2 360 55.3
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 2.5e-106 389.8 360 55.3
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 5.5e-106 388.7 292 64.4
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 9.3e-106 387.9 330 59.7
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 9.3e-106 387.9 360 55.0
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 5.7e-103 378.6 269 69.5
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.3e-102 377.5 272 66.9
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 1.0e-99 367.9 378 53.7
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.7e-99 367.1 355 51.8
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 8.4e-99 364.8 355 51.5
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.8e-94 349.7 313 56.9
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 4.8e-94 349.0 282 60.3
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 3.1e-93 346.3 272 62.9
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 9.0e-93 344.7 401 47.4
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 7.9e-89 331.6 233 67.0
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 1.0e-88 331.3 362 48.9
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.0e-83 314.7 252 62.3
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 1.0e-83 314.7 374 46.3
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 7.9e-81 305.1 322 48.4
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.8e-77 293.9 179 72.6
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 4.5e-76 289.3 355 47.6
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 1.1e-74 284.6 297 54.2
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 1.5e-74 284.3 303 48.5
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 1.2e-73 281.2 172 73.3
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 2.7e-57 226.9 198 60.1
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 6.3e-54 215.7 228 47.4
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.8e-48 197.6 173 56.1
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 2.7e-44 183.7 240 42.9
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.0e-40 171.8 146 59.6
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 2.3e-40 170.6 265 38.9
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 7.0e-37 159.1 184 43.5
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 9.5e-34 148.7 202 41.6
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 1.6e-25 121.3 71 83.1
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 7.6e-15 85.9 100 50.0
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 3.9e-11 73.6 48 66.7
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 3.9e-11 73.6 55 58.2
Nn2g16007 Nelumbo nucifera HOM05D006491 ORTHO05D008412 4.3e-10 70.1 88 48.9


User provided reference genes

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