Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 5.6e-220 767.3 385 100.0
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 3.7e-208 728.0 396 93.7
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 6.6e-197 690.6 394 90.4
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 3.9e-189 664.8 392 87.2
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 3.5e-166 588.6 371 83.8
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 4.6e-166 588.2 391 77.0
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 9.0e-162 573.9 390 77.2
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 1.6e-158 563.1 379 79.7
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 2.3e-149 532.7 392 71.9
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 4.8e-147 525.0 393 70.0
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 6.3e-147 524.6 395 71.4
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 3.1e-146 522.3 377 72.9
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 7.7e-145 517.7 377 73.5
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 5.5e-143 511.5 376 71.8
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 1.6e-142 510.0 377 71.1
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 2.7e-142 509.2 379 70.4
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 1.0e-141 507.3 378 71.4
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 1.0e-141 507.3 395 69.4
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 3.0e-141 505.8 377 70.6
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 8.8e-141 504.2 377 69.8
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 8.8e-141 504.2 380 71.1
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 1.5e-140 503.4 377 70.3
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 1.3e-139 500.4 377 70.0
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 1.7e-139 500.0 388 67.8
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 2.8e-139 499.2 387 67.7
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 4.8e-139 498.4 384 68.8
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 6.3e-139 498.0 378 69.3
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 1.4e-138 496.9 384 68.8
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 3.1e-138 495.7 392 67.6
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 1.6e-137 493.4 384 69.3
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 2.6e-137 492.7 392 67.3
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 4.5e-137 491.9 380 67.9
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 5.9e-137 491.5 377 66.6
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 7.7e-137 491.1 299 84.9
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 1.3e-136 490.3 384 67.7
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 1.7e-136 490.0 377 67.6
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 7.2e-135 484.6 379 66.2
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 7.2e-135 484.6 428 63.3
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 9.4e-135 484.2 374 67.9
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 3.6e-134 482.3 378 67.7
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 4.7e-134 481.9 368 70.4
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 1.4e-133 480.3 381 65.4
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 2.3e-133 479.6 402 65.4
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 4.0e-133 478.8 396 66.4
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 1.2e-132 477.2 378 66.1
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 2.0e-132 476.5 376 66.2
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 2.0e-132 476.5 376 66.5
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 2.0e-132 476.5 395 66.3
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 7.5e-132 474.6 416 63.0
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 9.7e-132 474.2 395 66.1
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 1.3e-131 473.8 376 67.0
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 2.2e-131 473.0 386 65.0
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 2.8e-131 472.6 334 73.4
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 3.1e-130 469.2 371 66.8
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 5.3e-130 468.4 343 69.7
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 9.1e-130 467.6 333 71.8
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 7.7e-129 464.5 343 69.7
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 7.7e-129 464.5 343 69.4
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 2.9e-128 462.6 371 65.2
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 3.8e-128 462.2 382 64.4
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 8.5e-128 461.1 387 64.3
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 1.5e-127 460.3 343 69.7
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 1.9e-127 459.9 433 57.5
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 5.5e-127 458.4 334 69.2
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 9.4e-127 457.6 403 62.8
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 2.1e-126 456.4 377 65.0
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 3.6e-126 455.7 377 65.0
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 6.1e-126 454.9 389 60.9
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 8.0e-126 454.5 385 63.9
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 1.0e-125 454.1 388 63.4
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 2.3e-125 453.0 386 63.5
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 3.0e-125 452.6 394 62.7
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 1.5e-124 450.3 377 64.5
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 1.5e-124 450.3 376 64.1
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 2.0e-124 449.9 373 66.0
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 2.0e-124 449.9 354 65.5
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 2.6e-124 449.5 378 63.5
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 3.4e-124 449.1 335 66.9
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 9.8e-124 447.6 390 61.3
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 1.3e-123 447.2 377 62.6
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 3.7e-123 445.7 378 61.9
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 3.7e-123 445.7 377 63.4
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 4.1e-122 442.2 385 61.8
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 7.0e-122 441.4 370 62.7
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 7.0e-122 441.4 337 68.2
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 9.1e-122 441.0 337 66.8
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 3.5e-121 439.1 370 63.2
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 7.7e-121 438.0 374 61.5
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 5.0e-120 435.3 282 80.9
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 1.9e-119 433.3 337 67.1
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 1.9e-119 433.3 337 67.1
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 2.5e-119 433.0 309 71.2
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 4.2e-119 432.2 336 66.4
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 7.2e-119 431.4 307 71.7
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 1.6e-118 430.3 378 61.6
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 4.7e-118 428.7 337 64.1
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 1.4e-117 427.2 332 67.8
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 1.4e-117 427.2 337 67.4
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 3.7e-115 419.1 329 66.9
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 1.1e-114 417.5 370 63.5
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 7.0e-114 414.8 345 62.9
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 2.5e-111 406.4 264 78.0
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 8.0e-110 401.4 317 66.9
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 9.8e-108 394.4 282 71.3
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 4.1e-106 389.0 276 75.4
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 1.5e-95 354.0 335 55.8
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 5.2e-93 345.5 246 72.8
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 8.9e-93 344.7 400 53.2
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 3.4e-92 342.8 319 56.1
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 5.4e-90 335.5 276 63.8
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 7.1e-90 335.1 303 58.7
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 2.3e-88 330.1 346 49.7
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 6.6e-88 328.6 385 50.4
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 1.1e-87 327.8 369 52.3
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 3.1e-85 319.7 321 55.8
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 3.4e-84 316.2 384 50.0
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 1.2e-81 307.8 383 48.8
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 1.0e-80 304.7 196 77.6
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 9.0e-77 291.6 302 52.0
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 2.7e-73 280.0 349 46.1
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 8.7e-72 275.0 201 73.1
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 4.0e-69 266.2 243 60.9
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 7.4e-63 245.4 210 61.9
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 1.4e-61 241.1 211 60.2
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 3.1e-61 240.0 355 37.7
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.6e-60 236.9 170 72.9
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 7.6e-60 235.3 205 61.0
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 2.9e-59 233.4 196 64.8
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 2.4e-58 230.3 362 39.2
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 1.1e-53 214.9 165 67.3
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 3.4e-52 209.9 217 54.4
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 1.2e-49 201.4 180 60.0
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 3.5e-49 199.9 124 73.4
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.3e-48 198.0 172 57.6
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 7.4e-47 192.2 372 34.9
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 5.0e-43 179.5 296 33.8
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 7.2e-42 175.6 175 52.6
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 1.4e-40 171.4 250 40.4
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 2.0e-36 157.5 367 31.3
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 5.9e-36 156.0 164 54.9
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 1.0e-35 155.2 122 63.9
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 3.0e-32 143.7 132 57.6
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 8.2e-30 135.6 329 34.7
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 2.5e-26 124.0 113 60.2
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 8.2e-22 109.0 104 57.7
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 1.5e-18 98.2 96 54.2
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 2.5e-18 97.4 72 62.5
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 4.7e-17 93.2 70 64.3
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 5.7e-15 86.3 45 93.3


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