Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G0905 Fragaria x ananassa HOM05D001578 ORTHO05D001207 1.0e-76 290.0 151 100.0
FAN17G3031 Fragaria x ananassa HOM05D016496 ORTHO05D001207 6.4e-71 270.8 151 95.4
FvH4_4g24940 Fragaria vesca HOM05D016496 ORTHO05D001207 8.4e-71 270.4 151 95.4
FAN07G2644 Fragaria x ananassa HOM05D019745 ORTHO05D001207 5.6e-59 231.1 125 96.8
RcHm_v2.0_Chr4g0432391 Rosa chinensis HOM05D001578 ORTHO05D001207 7.4e-27 124.4 150 52.7
FAN12G2012 Fragaria x ananassa HOM05D001578 ORTHO05D001207 4.1e-17 92.0 145 46.2
FvH4_6g33790 Fragaria vesca HOM05D001578 ORTHO05D001207 2.6e-16 89.4 146 38.4
RcHm_v2.0_Chr2g0144321 Rosa chinensis HOM05D001578 ORTHO05D001207 3.5e-16 89.0 146 36.3
RcHm_v2.0_Chr7g0200071 Rosa chinensis HOM05D001578 ORTHO05D001207 3.5e-16 89.0 146 36.3
RcHm_v2.0_Chr2g0143761 Rosa chinensis HOM05D001578 ORTHO05D001207 1.0e-15 87.4 146 35.6
MD16G1150100 Malus domestica HOM05D001578 ORTHO05D001207 8.5e-15 84.3 146 39.0
RcHm_v2.0_Chr4g0432401 Rosa chinensis HOM05D001578 ORTHO05D001207 8.0e-13 77.8 142 37.3
Prupe.1G114500 Prunus persica HOM05D001578 ORTHO05D001207 1.0e-12 77.4 144 34.7
Glyma.20G029700 Glycine max HOM05D001578 ORTHO05D001207 1.4e-12 77.0 144 34.0
Prupe.5G112600 Prunus persica HOM05D001578 ORTHO05D001207 3.0e-12 75.9 144 34.7
FvH4_1g05890 Fragaria vesca HOM05D001578 ORTHO05D001207 5.2e-12 75.1 145 36.6
MD13G1150200 Malus domestica HOM05D001578 ORTHO05D001207 6.7e-12 74.7 149 34.2
Cfa015283 Carpinus fangiana HOM05D001578 ORTHO05D001207 1.5e-11 73.6 145 37.9
FAN07G2152 Fragaria x ananassa HOM05D001578 ORTHO05D001207 2.0e-11 73.2 144 37.5
FAN18G0021 Fragaria x ananassa HOM05D001578 ORTHO05D001207 2.6e-11 72.8 145 38.6
Glyma.20G028900 Glycine max HOM05D001578 ORTHO05D001207 2.6e-11 72.8 144 31.9
FAN02G2223 Fragaria x ananassa HOM05D001578 ORTHO05D001207 3.3e-11 72.4 146 33.6
RcHm_v2.0_Chr4g0426481 Rosa chinensis HOM05D001578 ORTHO05D001207 4.4e-11 72.0 144 34.7
FvH4_4g20440 Fragaria vesca HOM05D001578 ORTHO05D001207 7.5e-11 71.2 144 37.5
FvH4_5g04330 Fragaria vesca HOM05D001578 ORTHO05D001207 7.5e-11 71.2 139 38.1
FAN12G2021 Fragaria x ananassa HOM05D001578 ORTHO05D001207 7.5e-11 71.2 144 37.5
Glyma.20G029000 Glycine max HOM05D001578 ORTHO05D001207 7.5e-11 71.2 144 34.0
Cc03_g00600 Coffea canephora HOM05D001578 ORTHO05D001207 9.7e-11 70.9 150 35.3
Glyma.20G028700 Glycine max HOM05D001578 ORTHO05D001207 1.3e-10 70.5 144 34.0
Glyma.20G029200 Glycine max HOM05D001578 ORTHO05D001207 1.3e-10 70.5 144 34.0
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 1.3e-10 70.5 148 35.1
Duzib177G0524 Durio zibethinus HOM05D001578 ORTHO05D001207 3.7e-10 68.9 148 34.5
Glyma.20G029500 Glycine max HOM05D001578 ORTHO05D001207 6.3e-10 68.2 144 33.3
MD03G1249600 Malus domestica HOM05D001578 ORTHO05D001207 6.3e-10 68.2 149 34.9
MD03G1250000 Malus domestica HOM05D001578 ORTHO05D001207 6.3e-10 68.2 149 34.9
Gohir.D10G180600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 8.2e-10 67.8 151 33.1
Gorai.011G202100 Gossypium raimondii HOM05D001578 ORTHO05D001207 8.2e-10 67.8 151 33.1
Sabra10G0043600 Salix brachista HOM05D001578 ORTHO05D001207 1.1e-09 67.4 149 33.6
Duzib151G0004 Durio zibethinus HOM05D001578 ORTHO05D001207 1.4e-09 67.0 147 33.3
Gohir.A05G275500 Gossypium hirsutum HOM05D001578 ORTHO05D001207 1.4e-09 67.0 147 34.0
FvH4_4g20430 Fragaria vesca HOM05D001578 ORTHO05D001207 1.8e-09 66.6 147 36.7
Gohir.D05G277600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 1.8e-09 66.6 147 34.0
Gorai.009G290600 Gossypium raimondii HOM05D001578 ORTHO05D001207 1.8e-09 66.6 147 34.0
Phvul.003G117100 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 2.4e-09 66.2 147 31.3
MSTRG.24829 Avicennia marina HOM05D001578 ORTHO05D001207 4.1e-09 65.5 149 33.6
Haze_01333 Corylus avellana HOM05D001578 ORTHO05D001207 9.1e-09 64.3 147 34.7
Haze_01338 Corylus avellana HOM05D001578 ORTHO05D001207 9.1e-09 64.3 147 34.7
MD03G1248700 Malus domestica HOM05D001578 ORTHO05D001207 9.1e-09 64.3 149 34.2
Manes.03G207100 Manihot esculenta HOM05D001578 ORTHO05D001207 1.2e-08 63.9 149 34.2
Phvul.003G117300 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 1.2e-08 63.9 147 33.3
QL06p012845 Quercus lobata HOM05D001578 ORTHO05D001207 1.2e-08 63.9 149 34.9
HanXRQChr13g0395201 Helianthus annuus HOM05D001578 ORTHO05D001207 1.6e-08 63.5 147 31.3
QL06p012837 Quercus lobata HOM05D001578 ORTHO05D001207 1.6e-08 63.5 148 34.5
VMungo1215G1199 Vigna mungo HOM05D001578 ORTHO05D001207 1.6e-08 63.5 147 30.6
CANSAT78G0727 Cannabis sativa HOM05D001578 ORTHO05D001207 2.0e-08 63.2 146 34.9
FAN17G1811 Fragaria x ananassa HOM05D016496 ORTHO05D035601 2.0e-08 63.2 145 32.4
Sabra10G0043700 Salix brachista HOM05D001578 ORTHO05D001207 2.0e-08 63.2 149 33.6
Cfa015284 Carpinus fangiana HOM05D001578 ORTHO05D001207 2.7e-08 62.8 147 34.7
COL.COLO4_34578 Corchorus olitorius HOM05D001578 ORTHO05D001207 2.7e-08 62.8 147 32.7
HanXRQChr13g0395151 Helianthus annuus HOM05D001578 ORTHO05D001207 2.7e-08 62.8 147 31.3
Peaxi162Scf00228g00064 Petunia axillaris HOM05D001578 ORTHO05D001207 2.7e-08 62.8 153 31.4
CiPaw.01G136000 Carya illinoinensis HOM05D001578 ORTHO05D001207 3.5e-08 62.4 147 35.4
HanXRQChr13g0395161 Helianthus annuus HOM05D001578 ORTHO05D001207 3.5e-08 62.4 143 32.2
TPR.G25429 Trifolium pratense HOM05D001578 ORTHO05D001207 3.5e-08 62.4 146 31.5
Ca_21409_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 4.5e-08 62.0 144 31.2
Ca_21424_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 4.5e-08 62.0 144 31.2
Ca_21425_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 4.5e-08 62.0 144 31.2
MD03G1249700 Malus domestica HOM05D001578 ORTHO05D001207 4.5e-08 62.0 149 32.9
Dinv44262 Davidia involucrata HOM05D001578 ORTHO05D001207 5.9e-08 61.6 145 33.1
QL06p012819 Quercus lobata HOM05D001578 ORTHO05D001207 5.9e-08 61.6 147 36.1
Potri.010G063000 Populus trichocarpa HOM05D001578 ORTHO05D001207 7.7e-08 61.2 147 33.3
Glyma.07G237300 Glycine max HOM05D001578 ORTHO05D001207 1.0e-07 60.8 148 32.4
Glyma.17G036400 Glycine max HOM05D001578 ORTHO05D001207 1.0e-07 60.8 148 31.8
MD13G1150400 Malus domestica HOM05D001578 ORTHO05D001207 1.0e-07 60.8 144 31.9
Prupe.3G146800 Prunus persica HOM05D001578 ORTHO05D001207 1.0e-07 60.8 144 32.6
Lj3P834T43 Lonicera japonica HOM05D001578 ORTHO05D001207 1.3e-07 60.5 148 32.4
Phvul.003G117400 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 1.3e-07 60.5 147 33.3
TPR.G25401 Trifolium pratense HOM05D001578 ORTHO05D001207 1.7e-07 60.1 146 31.5
CiPaw.01G135900 Carya illinoinensis HOM05D001578 ORTHO05D001207 2.2e-07 59.7 152 34.9
HanXRQChr13g0393461 Helianthus annuus HOM05D001578 ORTHO05D001207 2.2e-07 59.7 147 29.9
FvH4_4g25190 Fragaria vesca HOM05D001578 ORTHO05D001207 2.9e-07 59.3 146 35.6
Manes.15G098100 Manihot esculenta HOM05D001578 ORTHO05D001207 2.9e-07 59.3 147 32.0
HanXRQChr13g0395221 Helianthus annuus HOM05D001578 ORTHO05D001207 3.8e-07 58.9 147 30.6
Prupe.1G113800 Prunus persica HOM05D001578 ORTHO05D001207 3.8e-07 58.9 147 33.3
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 5.0e-07 58.5 149 30.9
CSS0037733 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 5.0e-07 58.5 150 30.7
COL.COLO4_34577 Corchorus olitorius HOM05D001578 ORTHO05D001207 5.0e-07 58.5 148 32.4
HanXRQChr13g0395171 Helianthus annuus HOM05D001578 ORTHO05D001207 5.0e-07 58.5 143 28.7
Phvul.003G117200 Phaseolus vulgaris HOM05D001578 ORTHO05D001207 5.0e-07 58.5 147 32.7
RcHm_v2.0_Chr4g0425861 Rosa chinensis HOM05D001578 ORTHO05D001207 5.0e-07 58.5 145 33.1
Manes.03G207000 Manihot esculenta HOM05D001578 ORTHO05D001207 6.5e-07 58.2 143 36.4
QL06p012826 Quercus lobata HOM05D001578 ORTHO05D001207 6.5e-07 58.2 148 34.5
FvH4_4g24920 Fragaria vesca HOM05D016496 ORTHO05D035601 8.5e-07 57.8 145 32.4
FAN12G0495 Fragaria x ananassa HOM05D016496 ORTHO05D035601 8.5e-07 57.8 145 32.4
Lsat_1_v5_gn_5_185380 Lactuca sativa HOM05D001578 ORTHO05D001207 8.5e-07 57.8 144 29.2
Psat0s4829g0040 Pisum sativum HOM05D001578 ORTHO05D001207 1.1e-06 57.4 147 28.6
TWI75G0074 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 1.1e-06 57.4 153 27.5
FAN19G1571 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.5e-06 57.0 145 35.2
Medtr2g033630 Medicago truncatula HOM05D001578 ORTHO05D001207 1.5e-06 57.0 152 31.6
VMungo1215G0431 Vigna mungo HOM05D001578 ORTHO05D001207 1.5e-06 57.0 147 30.6
Ca_21410_v3 Cicer arietinum L. HOM05D001578 ORTHO05D001207 1.9e-06 56.6 145 31.7
MSTRG.24828 Avicennia marina HOM05D001578 ORTHO05D001207 2.5e-06 56.2 149 31.5
Duzib052G1048 Durio zibethinus HOM05D001578 ORTHO05D001207 2.5e-06 56.2 147 31.3
Duzib151G0695 Durio zibethinus HOM05D001578 ORTHO05D001207 2.5e-06 56.2 147 31.3
FvH4_4g20180 Fragaria vesca HOM05D001578 ORTHO05D001207 2.5e-06 56.2 144 32.6
FAN07G0539 Fragaria x ananassa HOM05D001578 ORTHO05D001207 2.5e-06 56.2 144 32.6
FAN12G2195 Fragaria x ananassa HOM05D001578 ORTHO05D001207 2.5e-06 56.2 144 32.6
FAN17G3073 Fragaria x ananassa HOM05D001578 ORTHO05D001207 2.5e-06 56.2 141 33.3
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 3.2e-06 55.8 108 35.2
FAN22G2269 Fragaria x ananassa HOM05D001578 ORTHO05D001207 3.2e-06 55.8 141 33.3
Lalb_Chr12g0200771 Lupinus albus HOM05D001578 ORTHO05D001207 3.2e-06 55.8 146 33.6
Lalb_Chr13g0298621 Lupinus albus HOM05D001578 ORTHO05D001207 3.2e-06 55.8 145 31.0
PGR031G1824 Punica granatum HOM05D001578 ORTHO05D001207 4.2e-06 55.5 150 32.0
Duzib052G0195 Durio zibethinus HOM05D001578 ORTHO05D001207 5.5e-06 55.1 147 32.0
ECA233G5780 Erigeron canadensis HOM05D001578 ORTHO05D001207 5.5e-06 55.1 147 29.3
FvH4_4g25210 Fragaria vesca HOM05D001578 ORTHO05D001207 5.5e-06 55.1 141 33.3
FAN12G0064 Fragaria x ananassa HOM05D000713 ORTHO05D000547 5.5e-06 55.1 141 33.3
Lalb_Chr07g0181931 Lupinus albus HOM05D001578 ORTHO05D001207 5.5e-06 55.1 147 31.3
Lalb_Chr15g0089101 Lupinus albus HOM05D001578 ORTHO05D001207 7.2e-06 54.7 150 32.0
Psat4g021360 Pisum sativum HOM05D001578 ORTHO05D001207 7.2e-06 54.7 146 27.4
Lalb_Chr13g0298611 Lupinus albus HOM05D001578 ORTHO05D001207 9.4e-06 54.3 114 33.3
Lalb_Chr20g0117771 Lupinus albus HOM05D001578 ORTHO05D001207 9.4e-06 54.3 144 31.2
Manes.02G201700 Manihot esculenta HOM05D001578 ORTHO05D001207 9.4e-06 54.3 150 32.0
Potri.009G083500 Populus trichocarpa HOM05D001578 ORTHO05D001207 9.4e-06 54.3 149 31.5


User provided reference genes

Program Settings