Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G0875 Fragaria x ananassa HOM05D007313 ORTHO05D005299 7.8e-49 196.8 100 100.0
FAN12G3843 Fragaria x ananassa HOM05D007313 ORTHO05D005299 1.4e-45 186.0 101 96.0
FvH4_4g33670 Fragaria vesca HOM05D007313 ORTHO05D005299 1.5e-39 166.0 89 96.6
FAN07G0870 Fragaria x ananassa HOM05D007313 ORTHO05D005299 8.4e-27 123.6 98 72.4
RcHm_v2.0_Chr4g0443131 Rosa chinensis HOM05D007313 ORTHO05D005299 1.1e-23 113.2 73 87.7
Prupe.1G332700 Prunus persica HOM05D007313 ORTHO05D005299 1.8e-13 79.3 66 69.7
MD16G1019400 Malus domestica HOM05D007313 ORTHO05D005299 9.0e-13 77.0 61 68.9
Duzib268G0019 Durio zibethinus HOM05D007313 ORTHO05D005299 7.6e-12 73.9 74 62.2
COL.COLO4_16580 Corchorus olitorius HOM05D007313 ORTHO05D005299 1.3e-11 73.2 57 73.7
Gohir.A03G114900 Gossypium hirsutum HOM05D007313 ORTHO05D005299 1.7e-11 72.8 74 62.2
Gohir.A01G147300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 3.8e-11 71.6 76 61.8
Gohir.D01G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 3.8e-11 71.6 76 61.8
Gorai.002G172500 Gossypium raimondii HOM05D007313 ORTHO05D005299 3.8e-11 71.6 76 61.8
Gohir.D02G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 1.1e-10 70.1 61 67.2
Gorai.005G156500 Gossypium raimondii HOM05D007313 ORTHO05D005299 1.1e-10 70.1 61 67.2
Thecc.02G291900 Theobroma cacao HOM05D007313 ORTHO05D005299 1.1e-10 70.1 65 69.2
Atru.chr11.945 Acer truncatum HOM05D007313 ORTHO05D005299 4.2e-10 68.2 59 67.8
Duzib248G0390 Durio zibethinus HOM05D007313 ORTHO05D005299 5.5e-10 67.8 63 65.1
Cfa015015 Carpinus fangiana HOM05D007313 ORTHO05D005299 1.6e-09 66.2 57 68.4
QL03p035637 Quercus lobata HOM05D007313 ORTHO05D005299 2.1e-09 65.9 81 54.3
Haze_10890 Corylus avellana HOM05D007313 ORTHO05D005299 1.3e-08 63.2 57 64.9
Potri.008G134100 Populus trichocarpa HOM05D007313 ORTHO05D005299 6.7e-08 60.8 59 57.6
Phvul.002G320600 Phaseolus vulgaris HOM05D007313 ORTHO05D005299 1.1e-07 60.1 59 62.7
Cpa.g.sc2.206 Carica papaya HOM05D007313 ORTHO05D005299 1.9e-07 59.3 58 62.1
Glyma.08G045300 Glycine max HOM05D007313 ORTHO05D005299 5.7e-07 57.8 65 56.9
Sabra08G0102600 Salix brachista HOM05D007313 ORTHO05D005299 1.3e-06 56.6 59 54.2
Ca_17263_v3 Cicer arietinum L. HOM05D007313 ORTHO05D005299 2.8e-06 55.5 57 59.6
Ca_17284_v3 Cicer arietinum L. HOM05D007313 ORTHO05D005299 2.8e-06 55.5 57 59.6
Manes.15G133700 Manihot esculenta HOM05D007313 ORTHO05D005299 3.7e-06 55.1 64 54.7
THA.LOC104825566 Tarenaya hassleriana HOM05D007313 ORTHO05D005299 3.7e-06 55.1 58 56.9
Ciclev10017248m.g Citrus clementina HOM05D007313 ORTHO05D005299 4.8e-06 54.7 51 66.7
Manes.17G083600 Manihot esculenta HOM05D007313 ORTHO05D005299 6.2e-06 54.3 72 48.6
MBI13_g37857_MAGBIO Magnolia biondii HOM05D008500 ORTHO05D005299 8.2e-06 53.9 63 55.6


User provided reference genes

Program Settings