Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G0728 Fragaria x ananassa HOM05D005475 ORTHO05D006575 3.0e-44 181.4 89 100.0
FAN12G1687 Fragaria x ananassa HOM05D005475 ORTHO05D006575 4.2e-38 161.0 79 100.0
FvH4_4g04340 Fragaria vesca HOM05D005475 ORTHO05D006575 2.7e-37 158.3 79 98.7
FAN22G1457 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.0e-36 156.4 80 97.5
FAN17G2060 Fragaria x ananassa HOM05D005475 ORTHO05D006575 3.9e-36 154.5 79 97.5
MD13G1219400 Malus domestica HOM05D005475 ORTHO05D006575 8.3e-18 93.6 84 59.5
MD16G1224800 Malus domestica HOM05D005475 ORTHO05D006575 8.3e-18 93.6 84 60.7
RcHm_v2.0_Chr4g0394821 Rosa chinensis HOM05D005475 ORTHO05D006575 1.6e-16 89.4 85 60.0
RcHm_v2.0_Chr4g0394791 Rosa chinensis HOM05D005475 ORTHO05D006575 1.3e-15 86.3 85 57.6
Prupe.1G046100 Prunus persica HOM05D005475 ORTHO05D006575 2.3e-15 85.5 84 56.0
Glyma.20G086200 Glycine max HOM05D005475 ORTHO05D006575 6.6e-15 84.0 64 64.1
Phvul.007G271300 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 3.3e-14 81.6 58 67.2
Glyma.10G136600 Glycine max HOM05D005475 ORTHO05D006575 4.2e-14 81.3 59 66.1
Psat6g107160 Pisum sativum HOM05D005475 ORTHO05D006575 1.6e-13 79.3 58 63.8
Ca_11926_v3 Cicer arietinum L. HOM05D005475 ORTHO05D006575 2.3e-12 75.5 58 62.1
TPR.G27310 Trifolium pratense HOM05D005475 ORTHO05D006575 2.3e-12 75.5 55 67.3
Thecc.04G261900 Theobroma cacao HOM05D005475 ORTHO05D006575 4.0e-12 74.7 84 47.6
Cfa014769 Carpinus fangiana HOM05D005475 ORTHO05D006575 8.9e-12 73.6 85 51.8
Potri.008G170700 Populus trichocarpa HOM05D005475 ORTHO05D006575 8.9e-12 73.6 86 53.5
Medtr1g045370 Medicago truncatula HOM05D005475 ORTHO05D006575 1.5e-11 72.8 60 60.0
Atru.chr4.1933 Acer truncatum HOM05D005475 ORTHO05D006575 2.0e-11 72.4 67 52.2
THA.LOC104816000 Tarenaya hassleriana HOM05D005475 ORTHO05D006575 2.0e-11 72.4 59 57.6
TWI73G1305 Tripterygium wilfordii HOM05D005475 ORTHO05D006575 2.6e-11 72.0 60 60.0
Dinv27096 Davidia involucrata HOM05D005475 ORTHO05D006575 3.4e-11 71.6 47 68.1
Lalb_Chr06g0169471 Lupinus albus HOM05D005475 ORTHO05D006575 4.4e-11 71.2 85 49.4
Sabra10G0040200 Salix brachista HOM05D005475 ORTHO05D006575 5.7e-11 70.9 67 56.7
Gohir.A02G042200 Gossypium hirsutum HOM05D005475 ORTHO05D006575 7.5e-11 70.5 78 48.7
GSVIVG01027899001 Vitis vinifera HOM05D005475 ORTHO05D006575 7.5e-11 70.5 56 58.9
Gorai.005G053100 Gossypium raimondii HOM05D005475 ORTHO05D006575 9.8e-11 70.1 78 50.0
Gohir.D02G047800 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.3e-10 69.7 78 48.7
Aa31LG1G20410 Aethionema arabicum HOM05D005475 ORTHO05D006575 1.7e-10 69.3 78 50.0
Potri.010G067200 Populus trichocarpa HOM05D005475 ORTHO05D006575 1.7e-10 69.3 59 61.0
TAR365G0748 Trochodendron aralioides HOM05D005475 ORTHO05D006575 1.7e-10 69.3 53 58.5
COL.COLO4_15946 Corchorus olitorius HOM05D005475 ORTHO05D006575 3.7e-10 68.2 73 49.3
CiPaw.02G108100 Carya illinoinensis HOM05D005475 ORTHO05D006575 4.9e-10 67.8 81 49.4
Duzib151G0481 Durio zibethinus HOM05D005475 ORTHO05D006575 4.9e-10 67.8 61 55.7
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 4.9e-10 67.8 57 63.2
Lj6g0010293 Lotus japonicus HOM05D005475 ORTHO05D006575 4.9e-10 67.8 45 66.7
CiPaw.01G179400 Carya illinoinensis HOM05D005475 ORTHO05D006575 6.3e-10 67.4 82 50.0
Glyma.20G201100 Glycine max HOM05D005475 ORTHO05D006575 8.3e-10 67.0 62 61.3
Nn3g19747 Nelumbo nucifera HOM05D005475 ORTHO05D006575 8.3e-10 67.0 44 65.9
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 8.3e-10 67.0 56 64.3
CANSAT78G0624 Cannabis sativa HOM05D005475 ORTHO05D006575 1.1e-09 66.6 82 45.1
CAN.G220.90 Capsicum annuum HOM05D005475 ORTHO05D006575 1.4e-09 66.2 61 57.4
Lalb_Chr19g0128471 Lupinus albus HOM05D005475 ORTHO05D006575 1.8e-09 65.9 62 58.1
Peaxi162Scf00033g02837 Petunia axillaris HOM05D005475 ORTHO05D006575 1.8e-09 65.9 45 68.9
QL06p020702 Quercus lobata HOM05D005475 ORTHO05D006575 1.8e-09 65.9 82 48.8
Glyma.10G189800 Glycine max HOM05D005475 ORTHO05D006575 2.4e-09 65.5 61 62.3
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 2.4e-09 65.5 75 53.3
Solyc09g090540.3 Solanum lycopersicum HOM05D005475 ORTHO05D006575 2.4e-09 65.5 44 68.2
Sopen09g033470 Solanum pennellii HOM05D005475 ORTHO05D006575 2.4e-09 65.5 44 68.2
PGSC0003DMG400017155 Solanum tuberosum HOM05D005475 ORTHO05D006575 2.4e-09 65.5 44 68.2
Cc03_g06010 Coffea canephora HOM05D005475 ORTHO05D006575 4.1e-09 64.7 78 44.9
TAR362G0816 Trochodendron aralioides HOM05D005475 ORTHO05D006575 4.1e-09 64.7 44 65.9
Duzib212G0290 Durio zibethinus HOM05D005475 ORTHO05D006575 5.4e-09 64.3 73 49.3
Gohir.D10G159400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 5.4e-09 64.3 57 54.4
Gorai.011G179000 Gossypium raimondii HOM05D005475 ORTHO05D006575 5.4e-09 64.3 57 54.4
MBI07_g18714_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 5.4e-09 64.3 47 61.7
Manes.15G044300 Manihot esculenta HOM05D005475 ORTHO05D006575 5.4e-09 64.3 69 50.7
CARHR127400 Cardamine hirsuta HOM05D005475 ORTHO05D006575 7.0e-09 63.9 57 54.4
MELO3C006388.2 Cucumis melo HOM05D000730 ORTHO05D000578 7.0e-09 63.9 55 54.5
CsaV3_3G011800 Cucumis sativus L. HOM05D005475 ORTHO05D006575 7.0e-09 63.9 55 54.5
Lj5g0027748 Lotus japonicus HOM05D005475 ORTHO05D006575 1.2e-08 63.2 64 59.4
MBI10_g38466_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 1.2e-08 63.2 58 60.3
Psat6g117200 Pisum sativum HOM05D005475 ORTHO05D006575 1.2e-08 63.2 85 47.1
PGR031G0084 Punica granatum HOM05D005475 ORTHO05D006575 1.2e-08 63.2 60 51.7
Sed0016324 Sechium edule HOM05D005475 ORTHO05D006575 1.2e-08 63.2 57 50.9
Sc13g0006140 Simmondsia chinensis HOM05D005475 ORTHO05D006575 1.2e-08 63.2 56 58.9
ClCG05G004080 Citrullus lanatus HOM05D005475 ORTHO05D006575 1.6e-08 62.8 47 55.3
Gohir.A10G108400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.6e-08 62.8 57 52.6
TPR.G28846 Trifolium pratense HOM05D005475 ORTHO05D006575 2.0e-08 62.4 83 44.6
CSS0022443 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 2.7e-08 62.0 59 55.9
Ciclev10006301m.g Citrus clementina HOM05D005475 ORTHO05D006575 2.7e-08 62.0 57 50.9
Manes.03G160400 Manihot esculenta HOM05D005475 ORTHO05D006575 2.7e-08 62.0 58 55.2
Phvul.L002444 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 2.7e-08 62.0 62 58.1
BcaB02g10558 Brassica carinata HOM05D005475 ORTHO05D006575 3.5e-08 61.6 78 44.9
ECA248G3571 Erigeron canadensis HOM05D000730 ORTHO05D000578 3.5e-08 61.6 61 52.5
Nn1g02914 Nelumbo nucifera HOM05D005475 ORTHO05D006575 3.5e-08 61.6 46 67.4
Nitab4.5_0002709g0070 Nicotiana tabacum HOM05D005475 ORTHO05D006575 3.5e-08 61.6 70 44.3
Sed0012950 Sechium edule HOM05D005475 ORTHO05D006575 3.5e-08 61.6 58 48.3
Hund03078 Selenicereus undatus HOM05D005475 ORTHO05D006575 3.5e-08 61.6 47 55.3
Medtr1g073660 Medicago truncatula HOM05D005475 ORTHO05D006575 4.5e-08 61.2 64 51.6
AL4G29060 Arabidopsis lyrata HOM05D005475 ORTHO05D006575 5.9e-08 60.8 54 53.7
Eucgr.H02964 Eucalyptus grandis HOM05D005475 ORTHO05D006575 5.9e-08 60.8 47 57.4
Nitab4.5_0001051g0090 Nicotiana tabacum HOM05D005475 ORTHO05D006575 5.9e-08 60.8 67 46.3
Thhalv10017471m.g Eutrema salsugineum HOM05D005475 ORTHO05D006575 7.8e-08 60.5 54 53.7
AT2G33390 Arabidopsis thaliana HOM05D005475 ORTHO05D006575 1.0e-07 60.1 54 55.6
Sp4g15710 Schrenkiella parvula HOM05D005475 ORTHO05D006575 1.0e-07 60.1 80 45.0
VMungo0720G1758 Vigna mungo HOM05D005475 ORTHO05D006575 1.7e-07 59.3 62 56.5
Aa31LG5G3900 Aethionema arabicum HOM05D005475 ORTHO05D006575 2.3e-07 58.9 73 45.2
CSS0013344 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 2.3e-07 58.9 69 49.3
Actinidia39922 Actinidia chinensis HOM05D005475 ORTHO05D006575 2.9e-07 58.5 69 42.0
PSO674G0109 Papaver somniferum HOM05D005475 ORTHO05D006575 2.9e-07 58.5 42 61.9
PSO832G2786 Papaver somniferum HOM05D005475 ORTHO05D006575 2.9e-07 58.5 42 61.9
A05p12130 Brassica napus HOM05D005475 ORTHO05D006575 5.0e-07 57.8 84 39.3
Carub.0004s1502 Capsella rubella HOM05D005475 ORTHO05D006575 5.0e-07 57.8 69 47.8
Lsat_1_v5_gn_1_75221 Lactuca sativa HOM05D005475 ORTHO05D006575 5.0e-07 57.8 67 49.3
Actinidia11364 Actinidia chinensis HOM05D005475 ORTHO05D006575 6.6e-07 57.4 55 49.1
vmacro08540 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 8.6e-07 57.0 66 45.5
BraA05t20157Z Brassica rapa HOM05D005475 ORTHO05D006575 1.1e-06 56.6 85 38.8
BcaC02g11426 Brassica carinata HOM05D005475 ORTHO05D006575 1.5e-06 56.2 76 40.8
C04p15700 Brassica napus HOM05D005475 ORTHO05D006575 1.5e-06 56.2 76 40.8
BolC4t23138H Brassica oleracea HOM05D005475 ORTHO05D006575 1.5e-06 56.2 76 40.8
Rhsim04G0173600 Rhododendron simsii HOM05D005475 ORTHO05D006575 1.5e-06 56.2 62 45.2
Rhsim02G0042800 Rhododendron simsii HOM05D005475 ORTHO05D006575 1.9e-06 55.8 56 44.6
vmacro15470 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 1.9e-06 55.8 46 52.2
DCAR_027337 Daucus carota HOM05D005475 ORTHO05D006575 9.5e-06 53.5 79 39.2


User provided reference genes

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