Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G0418 Fragaria x ananassa HOM05D007411 ORTHO05D009025 5.5e-136 487.6 251 100.0
FAN07G0509 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.4e-102 376.7 219 92.2
FAN17G1166 Fragaria x ananassa HOM05D007411 ORTHO05D009025 3.4e-101 372.1 219 91.3
FAN12G4330 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.9e-99 366.3 219 89.0
FvH4_4g15980 Fragaria vesca HOM05D007411 ORTHO05D009025 3.8e-92 342.0 219 85.4
RcHm_v2.0_Chr4g0415591 Rosa chinensis HOM05D007411 ORTHO05D009025 4.7e-50 202.2 131 82.4
Prupe.1G017200 Prunus persica HOM05D007411 ORTHO05D009025 1.0e-44 184.5 224 54.9
RcHm_v2.0_Chr4g0391821 Rosa chinensis HOM05D007411 ORTHO05D009025 1.4e-38 164.1 127 70.9
MD13G1196400 Malus domestica HOM05D007411 ORTHO05D009025 5.4e-30 135.6 116 63.8
MD16G1196900 Malus domestica HOM05D007411 ORTHO05D009025 1.2e-29 134.4 92 75.0
QL06p001698 Quercus lobata HOM05D007411 ORTHO05D009025 1.6e-29 134.0 163 50.9
Dinv14014 Davidia involucrata HOM05D007411 ORTHO05D009025 1.0e-28 131.3 174 46.6
Hma1.2p1_1572F.1_g291440 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 5.0e-28 129.0 175 45.1
Hma1.2p1_2201F.1_g317040 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 5.0e-28 129.0 175 45.1
TWI09G1055 Tripterygium wilfordii HOM05D007411 ORTHO05D009025 1.0e-25 121.3 202 41.6
CiPaw.01G198400 Carya illinoinensis HOM05D007411 ORTHO05D009025 1.8e-25 120.6 175 44.6
Sopen09g031190 Solanum pennellii HOM05D007411 ORTHO05D009025 6.8e-25 118.6 153 41.8
Solyc09g082310.2 Solanum lycopersicum HOM05D007411 ORTHO05D009025 8.8e-25 118.2 153 41.8
Gorai.006G240700 Gossypium raimondii HOM05D007411 ORTHO05D009025 2.6e-24 116.7 190 44.7
Gohir.D09G219700 Gossypium hirsutum HOM05D007411 ORTHO05D009025 7.5e-24 115.2 190 44.2
Cfa008473 Carpinus fangiana HOM05D007411 ORTHO05D009025 9.8e-24 114.8 116 56.9
AT4G14805 Arabidopsis thaliana HOM05D007411 ORTHO05D009025 1.7e-23 114.0 209 37.3
Gohir.A09G217300 Gossypium hirsutum HOM05D007411 ORTHO05D009025 2.2e-23 113.6 190 42.1
Nitab4.5_0004062g0070 Nicotiana tabacum HOM05D007411 ORTHO05D009025 1.1e-22 111.3 138 43.5
BolC6t36888H Brassica oleracea HOM05D007411 ORTHO05D009025 2.4e-22 110.2 202 36.6
SalBow2G3064 Salvia bowleyana HOM05D007411 ORTHO05D009025 2.4e-22 110.2 168 41.7
Potri.010G085000 Populus trichocarpa HOM05D007411 ORTHO05D009025 4.1e-22 109.4 190 38.9
Nitab4.5_0002307g0080 Nicotiana tabacum HOM05D007411 ORTHO05D009025 5.4e-22 109.0 120 46.7
THA.LOC104808560 Tarenaya hassleriana HOM05D007411 ORTHO05D009025 5.4e-22 109.0 159 44.7
CANSAT78G1457 Cannabis sativa HOM05D007411 ORTHO05D009025 7.0e-22 108.6 167 43.1
C06p16920 Brassica napus HOM05D007411 ORTHO05D009025 9.2e-22 108.2 220 35.5
Nn6g34119 Nelumbo nucifera HOM05D007411 ORTHO05D009025 9.2e-22 108.2 119 47.9
BcaC08g44271 Brassica carinata HOM05D007411 ORTHO05D009025 1.2e-21 107.8 202 36.1
arahy.Tifrunner.gnm1.ann1.SC2WWN Arachis hypogaea HOM05D007411 ORTHO05D009025 1.6e-21 107.5 154 43.5
CsaV3_7G022390 Cucumis sativus L. HOM05D007411 ORTHO05D009025 2.7e-21 106.7 160 38.1
ECA236G4939 Erigeron canadensis HOM05D007411 ORTHO05D009025 2.7e-21 106.7 163 39.3
A05p15610 Brassica napus HOM05D007411 ORTHO05D009025 3.5e-21 106.3 202 38.1
CARHR221360 Cardamine hirsuta HOM05D007411 ORTHO05D009025 3.5e-21 106.3 187 41.7
ClCG06G006330 Citrullus lanatus HOM05D007411 ORTHO05D009025 3.5e-21 106.3 170 37.1
MELO3C012663.2 Cucumis melo HOM05D007411 ORTHO05D009025 3.5e-21 106.3 169 39.1
BcaC02g11603 Brassica carinata HOM05D007411 ORTHO05D009025 4.5e-21 105.9 160 42.5
A05p16750 Brassica napus HOM05D007411 ORTHO05D009025 4.5e-21 105.9 192 38.0
C04p13410 Brassica napus HOM05D007411 ORTHO05D009025 4.5e-21 105.9 160 42.5
arahy.Tifrunner.gnm1.ann1.UE7NK8 Arachis hypogaea HOM05D007411 ORTHO05D009025 7.7e-21 105.1 154 42.9
BraA05t20476Z Brassica rapa HOM05D007411 ORTHO05D009025 7.7e-21 105.1 200 39.0
AL7G41060 Arabidopsis lyrata HOM05D007411 ORTHO05D009025 1.0e-20 104.8 205 37.6
Migut.G00360 Erythranthe guttata HOM05D007411 ORTHO05D009025 1.0e-20 104.8 104 49.0
Ciclev10006648m.g Citrus clementina HOM05D007411 ORTHO05D009025 1.3e-20 104.4 122 49.2
Lsat_1_v5_gn_9_80381 Lactuca sativa HOM05D007411 ORTHO05D009025 1.3e-20 104.4 114 47.4
TAR633G2267 Trochodendron aralioides HOM05D007411 ORTHO05D009025 1.3e-20 104.4 123 48.8
BraA05t20579Z Brassica rapa HOM05D007411 ORTHO05D009025 1.7e-20 104.0 192 38.5
BcaB02g07857 Brassica carinata HOM05D007411 ORTHO05D009025 2.3e-20 103.6 114 49.1
Actinidia23528 Actinidia chinensis HOM05D007411 ORTHO05D009025 2.9e-20 103.2 159 39.6
Atru.chr4.2432 Acer truncatum HOM05D007411 ORTHO05D009025 5.0e-20 102.4 102 54.9
BcaB04g18262 Brassica carinata HOM05D007411 ORTHO05D009025 5.0e-20 102.4 178 41.0
SGA_v2.0_scaffold151G36714 Striga asiatica HOM05D007411 ORTHO05D009025 5.0e-20 102.4 187 40.1
CAN.G1094.25 Capsicum annuum HOM05D007411 ORTHO05D009025 6.6e-20 102.1 137 41.6
LjContig00222g0000468 Lotus japonicus HOM05D007411 ORTHO05D009025 8.6e-20 101.7 142 43.7
Sed0024167 Sechium edule HOM05D007411 ORTHO05D009025 8.6e-20 101.7 124 44.4
BraA08t33142Z Brassica rapa HOM05D007411 ORTHO05D009025 1.1e-19 101.3 128 44.5
Peaxi162Scf00092g00336 Petunia axillaris HOM05D007411 ORTHO05D009025 1.1e-19 101.3 100 45.0
BcaC07g37855 Brassica carinata HOM05D007411 ORTHO05D009025 1.5e-19 100.9 108 49.1
BolC8t48245H Brassica oleracea HOM05D007411 ORTHO05D009025 1.5e-19 100.9 108 49.1
Cpa.g.sc58.79 Carica papaya HOM05D007411 ORTHO05D009025 1.9e-19 100.5 128 46.1
Sp7g12940 Schrenkiella parvula HOM05D007411 ORTHO05D009025 1.9e-19 100.5 108 50.0
Thhalv10027383m.g Eutrema salsugineum HOM05D007411 ORTHO05D009025 3.3e-19 99.8 198 38.4
Psat2g190000 Pisum sativum HOM05D007411 ORTHO05D009025 3.3e-19 99.8 132 47.7
Ca_24421_v3 Cicer arietinum L. HOM05D007411 ORTHO05D009025 4.3e-19 99.4 114 46.5
A08p11480 Brassica napus HOM05D007411 ORTHO05D009025 5.6e-19 99.0 173 38.2
PGR004G0639 Punica granatum HOM05D007411 ORTHO05D009025 5.6e-19 99.0 170 37.6
HanXRQChr05g0131941 Helianthus annuus HOM05D007411 ORTHO05D009025 7.3e-19 98.6 169 34.9
Aqoxy5G00439 Aquilegia oxysepala HOM05D007411 ORTHO05D009025 9.5e-19 98.2 142 43.0
CSS0014995 Camellia sinensis var. sinensis HOM05D007411 ORTHO05D009025 9.5e-19 98.2 147 40.8
VMungo1215G0970 Vigna mungo HOM05D007411 ORTHO05D009025 9.5e-19 98.2 111 48.6
Duzib151G0508 Durio zibethinus HOM05D007411 ORTHO05D009025 2.8e-18 96.7 103 49.5
Sc13g0004560 Simmondsia chinensis HOM05D007411 ORTHO05D009025 2.8e-18 96.7 204 37.3
Medtr5g006900 Medicago truncatula HOM05D007411 ORTHO05D009025 4.7e-18 95.9 134 47.0
LjContig00222g0003473 Lotus japonicus HOM05D007411 ORTHO05D009025 6.8e-17 92.0 124 50.0
Phvul.002G042700 Phaseolus vulgaris HOM05D007411 ORTHO05D009025 6.8e-17 92.0 151 42.4
FvH4_3g08061 Fragaria vesca HOM05D007411 ORTHO05D009025 8.9e-17 91.7 63 73.0
Medtr2g049980 Medicago truncatula HOM05D007411 ORTHO05D009025 1.2e-16 91.3 134 45.5
DCAR_027228 Daucus carota HOM05D002080 ORTHO05D002062 2.6e-16 90.1 90 45.6
Glyma.01G235100 Glycine max HOM05D007411 ORTHO05D009025 2.6e-16 90.1 110 48.2
Manes.03G176101 Manihot esculenta HOM05D007411 ORTHO05D009025 7.5e-16 88.6 170 38.8
Thecc.04G235100 Theobroma cacao HOM05D007411 ORTHO05D009025 2.2e-15 87.0 144 39.6
Psat7g023320 Pisum sativum HOM05D007411 ORTHO05D009025 2.9e-15 86.7 154 40.9
Eucgr.H03438 Eucalyptus grandis HOM05D007411 ORTHO05D009025 8.3e-15 85.1 101 47.5
COL.COLO4_21515 Corchorus olitorius HOM05D007411 ORTHO05D009025 1.8e-14 84.0 90 47.8
PSO210G5563 Papaver somniferum HOM05D007411 ORTHO05D009025 3.2e-14 83.2 142 37.3
PSO832G1886 Papaver somniferum HOM05D007411 ORTHO05D009025 5.4e-14 82.4 142 37.3
FvH4_2g13381 Fragaria vesca HOM05D003928 ORTHO05D009025 1.6e-13 80.9 64 64.1
Lalb_Chr05g0211151 Lupinus albus HOM05D007411 ORTHO05D009025 1.6e-13 80.9 134 38.1
TPR.G3913 Trifolium pratense HOM05D007411 ORTHO05D009025 2.0e-13 80.5 90 48.9
FvH4_2g27291 Fragaria vesca HOM05D007411 ORTHO05D009025 1.7e-12 77.4 51 74.5
Carub.0007s2732 Capsella rubella HOM05D007411 ORTHO05D009025 3.9e-12 76.3 123 36.6
FvH4_3g16330 Fragaria vesca HOM05D018240 ORTHO05D025480 6.6e-12 75.5 54 70.4
MBI11_g32995_MAGBIO Magnolia biondii HOM05D007411 ORTHO05D009025 1.2e-10 71.2 152 36.2
CDE05G0749 Ceratophyllum demersum HOM05D007411 ORTHO05D009025 3.6e-10 69.7 156 32.7
Os01g0607100 Oryza sativa ssp. japonica HOM05D032292 ORTHO05D009025 1.4e-09 67.8 148 31.8
FvH4_4g15921 Fragaria vesca HOM05D007411 ORTHO05D009025 1.8e-09 67.4 52 65.4
PSO724G0575 Papaver somniferum HOM05D007411 ORTHO05D009025 4.0e-09 66.2 81 39.5
TAR633G1834 Trochodendron aralioides HOM05D007411 ORTHO05D009025 1.5e-08 64.3 113 36.3
TAR633G0575 Trochodendron aralioides HOM05D007411 ORTHO05D009025 5.8e-08 62.4 81 38.3
Potri.008G155300 Populus trichocarpa HOM05D007411 ORTHO05D009025 8.3e-07 58.5 117 35.0
SEGI_22696 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 5.4e-06 55.8 136 32.4


User provided reference genes

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