Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G0221 Fragaria x ananassa HOM05D002413 ORTHO05D002638 7.6e-83 310.5 158 100.0
FAN22G0845 Fragaria x ananassa HOM05D002413 ORTHO05D002638 2.1e-64 249.2 136 94.1
FAN12G1212 Fragaria x ananassa HOM05D002413 ORTHO05D002638 6.7e-63 244.2 136 92.6
FvH4_4g25160 Fragaria vesca HOM05D002413 ORTHO05D002638 4.4e-62 241.5 136 91.9
FAN11G3212 Fragaria x ananassa HOM05D002413 ORTHO05D002638 1.7e-61 239.6 146 85.6
FAN17G1806 Fragaria x ananassa HOM05D002413 ORTHO05D002638 2.8e-61 238.8 136 91.2
FAN07G1142 Fragaria x ananassa HOM05D002413 ORTHO05D002638 8.2e-61 237.3 136 89.7
FvH4_3g29240 Fragaria vesca HOM05D002413 ORTHO05D002638 2.4e-60 235.7 146 84.2
RcHm_v2.0_Chr4g0432361 Rosa chinensis HOM05D002413 ORTHO05D002638 1.5e-57 226.5 136 84.6
RcHm_v2.0_Chr4g0432371 Rosa chinensis HOM05D002413 ORTHO05D002638 1.9e-41 172.9 150 64.0
FvH4_4g25170 Fragaria vesca HOM05D002413 ORTHO05D002638 1.5e-38 163.3 149 60.4
FAN12G2158 Fragaria x ananassa HOM05D002413 ORTHO05D002638 1.5e-38 163.3 149 60.4
Prupe.1G240200 Prunus persica HOM05D002413 ORTHO05D002638 2.0e-38 162.9 164 58.5
FAN17G2317 Fragaria x ananassa HOM05D002413 ORTHO05D002638 1.3e-37 160.2 149 59.1
MD13G1106000 Malus domestica HOM05D002413 ORTHO05D002638 5.4e-36 154.8 163 56.4
MD16G1106200 Malus domestica HOM05D002413 ORTHO05D002638 1.9e-33 146.4 163 54.6
QL03p056073 Quercus lobata HOM05D002413 ORTHO05D002638 8.3e-29 131.0 163 47.9
Haze_12296 Corylus avellana HOM05D002413 ORTHO05D002638 4.6e-27 125.2 162 46.9
Thecc.02G267400 Theobroma cacao HOM05D002413 ORTHO05D002638 5.0e-26 121.7 163 47.2
Cfa009263 Carpinus fangiana HOM05D002413 ORTHO05D002638 6.6e-26 121.3 162 46.9
GSVIVG01000588001 Vitis vinifera HOM05D002413 ORTHO05D002638 3.3e-25 119.0 168 44.0
CiPaw.05G176500 Carya illinoinensis HOM05D002413 ORTHO05D002638 1.4e-23 113.6 162 45.1
Gohir.D04G180600 Gossypium hirsutum HOM05D002413 ORTHO05D002638 6.8e-23 111.3 161 47.2
Gorai.012G173800 Gossypium raimondii HOM05D002413 ORTHO05D002638 6.8e-23 111.3 161 47.2
FAN28G1151 Fragaria x ananassa HOM05D002413 ORTHO05D002638 8.9e-23 110.9 68 83.8
Gohir.A04G137400 Gossypium hirsutum HOM05D002413 ORTHO05D002638 1.2e-22 110.5 161 46.6
CSS0005806 Camellia sinensis var. sinensis HOM05D002413 ORTHO05D002638 1.5e-22 110.2 161 43.5
Ciclev10030917m.g Citrus clementina HOM05D002413 ORTHO05D002638 2.6e-22 109.4 163 42.9
COL.COLO4_23537 Corchorus olitorius HOM05D002413 ORTHO05D002638 7.5e-22 107.8 163 44.8
Atru.chr11.2190 Acer truncatum HOM05D002413 ORTHO05D002638 9.8e-22 107.5 163 41.7
Thecc.02G267600 Theobroma cacao HOM05D002413 ORTHO05D002638 9.8e-22 107.5 162 43.8
Ciclev10030915m.g Citrus clementina HOM05D002413 ORTHO05D002638 1.7e-21 106.7 163 42.3
Manes.13G019800 Manihot esculenta HOM05D002413 ORTHO05D002638 3.7e-21 105.5 168 38.1
Sabra08G0139000 Salix brachista HOM05D002413 ORTHO05D002638 5.4e-20 101.7 173 41.6
CSS0003790 Camellia sinensis var. sinensis HOM05D002413 ORTHO05D002638 2.0e-19 99.8 156 40.4
Dinv11030 Davidia involucrata HOM05D002413 ORTHO05D005118 2.0e-19 99.8 157 40.8
Potri.008G182500 Populus trichocarpa HOM05D002413 ORTHO05D002638 3.5e-19 99.0 164 42.1
TAR622G0183 Trochodendron aralioides HOM05D002413 ORTHO05D002638 6.0e-19 98.2 160 41.2
Potri.010G051600 Populus trichocarpa HOM05D002413 ORTHO05D002638 1.0e-18 97.4 167 39.5
Dinv14758 Davidia involucrata HOM05D002413 ORTHO05D002638 1.3e-18 97.1 157 41.4
Sabra10G0018500 Salix brachista HOM05D002413 ORTHO05D002638 6.6e-18 94.7 166 40.4
CANSAT01G0319 Cannabis sativa HOM05D002413 ORTHO05D002638 8.6e-18 94.4 153 43.8
PGSC0003DMG400010778 Solanum tuberosum HOM05D002413 ORTHO05D002638 5.6e-17 91.7 161 37.3
TAR629G2013 Trochodendron aralioides HOM05D002413 ORTHO05D002638 1.2e-16 90.5 166 39.2
Actinidia08113 Actinidia chinensis HOM05D002413 ORTHO05D002638 1.6e-16 90.1 157 38.9
TAR371G0391 Trochodendron aralioides HOM05D002413 ORTHO05D002638 1.6e-16 90.1 169 39.1
Oeu025403.1 Olea europaea HOM05D002413 ORTHO05D002638 2.1e-16 89.7 157 40.1
Rhsim12G0038100 Rhododendron simsii HOM05D002413 ORTHO05D002638 2.8e-16 89.4 161 39.8
Oeu012668.1 Olea europaea HOM05D002413 ORTHO05D002638 1.2e-14 84.0 148 39.2
Nitab4.5_0000041g0110 Nicotiana tabacum HOM05D002413 ORTHO05D002638 9.8e-14 80.9 156 37.8
Sopen05g008900 Solanum pennellii HOM05D002413 ORTHO05D002638 9.8e-14 80.9 161 34.2
CSS0046473 Camellia sinensis var. sinensis HOM05D002413 ORTHO05D002638 3.7e-13 79.0 156 35.9
Actinidia37458 Actinidia chinensis HOM05D002413 ORTHO05D002638 4.9e-13 78.6 157 35.7
MSTRG.546 Avicennia marina HOM05D002413 ORTHO05D002638 4.9e-13 78.6 154 36.4
Peaxi162Scf00128g00625 Petunia axillaris HOM05D002413 ORTHO05D002638 4.9e-13 78.6 157 35.0
Aa31LG2G6240 Aethionema arabicum HOM05D002413 ORTHO05D002638 1.1e-12 77.4 105 49.5
Cpa.g.sc33.86 Carica papaya HOM05D002413 ORTHO05D002638 1.1e-12 77.4 81 53.1
ECA234G1912 Erigeron canadensis HOM05D002413 ORTHO05D002638 3.2e-12 75.9 140 37.1
THA.LOC104824017 Tarenaya hassleriana HOM05D002413 ORTHO05D002638 9.2e-12 74.3 154 35.7
Cc11_g16180 Coffea canephora HOM05D002413 ORTHO05D002638 1.2e-11 73.9 168 35.1
PSO478G3464 Papaver somniferum HOM05D002413 ORTHO05D002638 2.7e-11 72.8 147 36.7
Migut.K00637 Erythranthe guttata HOM05D002413 ORTHO05D002638 3.5e-11 72.4 150 36.7
SalBow2G0913 Salvia bowleyana HOM05D002413 ORTHO05D002638 3.0e-10 69.3 157 34.4
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 8.6e-10 67.8 135 36.3
FAN22G1604 Fragaria x ananassa HOM05D002413 ORTHO05D002638 1.1e-09 67.4 44 75.0
Aqoxy5G03629 Aquilegia oxysepala HOM05D002413 ORTHO05D002638 2.5e-09 66.2 163 33.7
TAR622G1427 Trochodendron aralioides HOM05D001103 ORTHO05D000954 2.1e-08 63.2 47 68.1
Lsat_1_v5_gn_4_2781 Lactuca sativa HOM05D002413 ORTHO05D002638 6.2e-08 61.6 146 35.6
Thhalv10007191m.g Eutrema salsugineum HOM05D002413 ORTHO05D002638 8.1e-08 61.2 71 50.7
COL.COLO4_23527 Corchorus olitorius HOM05D002413 ORTHO05D002638 1.1e-07 60.8 122 34.4
CDE02G0353 Ceratophyllum demersum HOM05D002413 ORTHO05D002638 2.3e-07 59.7 142 35.9
Sc04g0009750 Simmondsia chinensis HOM05D002413 ORTHO05D002638 2.3e-07 59.7 120 35.8
Sp1g11710 Schrenkiella parvula HOM05D002413 ORTHO05D002638 5.2e-07 58.5 71 49.3
Ah.03g133540 Amaranthus hybridus HOM05D002413 ORTHO05D002638 6.8e-07 58.2 150 34.0
CDE09G0816 Ceratophyllum demersum HOM05D002413 ORTHO05D002638 1.5e-06 57.0 140 35.7
BcaC05g25077 Brassica carinata HOM05D002413 ORTHO05D002638 2.0e-06 56.6 71 49.3
CARHR013560 Cardamine hirsuta HOM05D002413 ORTHO05D002638 2.6e-06 56.2 114 38.6
AL1G24870 Arabidopsis lyrata HOM05D002413 ORTHO05D002638 3.4e-06 55.8 119 37.0
Carub.0001s1292 Capsella rubella HOM05D002413 ORTHO05D002638 3.4e-06 55.8 72 52.8
Aa31LG1G1610 Aethionema arabicum HOM05D002413 ORTHO05D002638 4.4e-06 55.5 87 41.4
MBI17_g11953_MAGBIO Magnolia biondii HOM05D002413 ORTHO05D002638 4.4e-06 55.5 152 35.5
SGA_v2.0_scaffold100G29588 Striga asiatica HOM05D002413 ORTHO05D002638 4.4e-06 55.5 130 33.1
unitig_22.g6944 Utricularia gibba HOM05D002413 ORTHO05D002638 4.4e-06 55.5 154 29.9


User provided reference genes

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