Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G0216 Fragaria x ananassa HOM05D000023 ORTHO05D000014 6.3e-28 126.7 64 100.0
RcHm_v2.0_Chr6g0295001 Rosa chinensis HOM05D000023 ORTHO05D000014 6.8e-14 80.1 65 63.1
Atru.chr6.596 Acer truncatum HOM05D000023 ORTHO05D000014 2.0e-13 78.6 67 62.7
RcHm_v2.0_Chr2g0102701 Rosa chinensis HOM05D000023 ORTHO05D000014 2.0e-13 78.6 65 61.5
RcHm_v2.0_Chr6g0278171 Rosa chinensis HOM05D000023 ORTHO05D000014 4.4e-13 77.4 65 60.0
MD17G1176800 Malus domestica HOM05D000023 ORTHO05D000014 5.8e-13 77.0 67 61.2
Atru.chr13.2560 Acer truncatum HOM05D000023 ORTHO05D000014 3.7e-12 74.3 67 56.7
Atru.chr13.2538 Acer truncatum HOM05D000023 ORTHO05D000014 3.2e-11 71.2 67 55.2
Atru.chr7.421 Acer truncatum HOM05D000023 ORTHO05D000014 7.0e-11 70.1 67 56.7
Atru.chr5.1256 Acer truncatum HOM05D000023 ORTHO05D000014 9.2e-11 69.7 59 64.4
SHI06024 Sapria himalayana HOM05D000023 ORTHO05D000014 9.2e-11 69.7 67 56.7
SHI13402 Sapria himalayana HOM05D004297 ORTHO05D005213 9.2e-11 69.7 67 56.7
SHI14569 Sapria himalayana HOM05D000023 ORTHO05D000014 9.2e-11 69.7 67 56.7
SHI14718 Sapria himalayana HOM05D000023 ORTHO05D000014 9.2e-11 69.7 67 56.7
SHI17120 Sapria himalayana HOM05D000023 ORTHO05D000014 9.2e-11 69.7 67 56.7
SHI21487 Sapria himalayana HOM05D000023 ORTHO05D000014 9.2e-11 69.7 67 56.7
SHI26236 Sapria himalayana HOM05D000023 ORTHO05D000014 9.2e-11 69.7 67 56.7
SHI27557 Sapria himalayana HOM05D000023 ORTHO05D000014 9.2e-11 69.7 67 56.7
SHI49901 Sapria himalayana HOM05D000023 ORTHO05D000014 9.2e-11 69.7 67 56.7
SHI28166 Sapria himalayana HOM05D000023 ORTHO05D000014 1.2e-10 69.3 67 56.7
SHI07290 Sapria himalayana HOM05D000023 ORTHO05D000014 3.5e-10 67.8 67 53.7
SHI32734 Sapria himalayana HOM05D000023 ORTHO05D000014 6.0e-10 67.0 67 55.2
SHI12783 Sapria himalayana HOM05D000023 ORTHO05D000014 7.8e-10 66.6 67 53.7
Oeu061850.1 Olea europaea HOM05D000023 ORTHO05D000014 2.3e-09 65.1 65 55.4
Oeu032447.1 Olea europaea HOM05D000023 ORTHO05D000014 3.9e-09 64.3 65 55.4
arahy.Tifrunner.gnm1.ann1.UW16ZC Arachis hypogaea HOM05D000023 ORTHO05D000014 5.0e-09 63.9 67 52.2
Glyma.18G197350 Glycine max HOM05D000023 ORTHO05D000014 6.6e-09 63.5 67 49.3
PSO017G0124 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO017G0971 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO017G1031 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO017G4761 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO063G2876 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO063G3226 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO063G7474 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO104G0268 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO170G3895 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO210G0286 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO339G3850 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO478G1709 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO478G3870 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO675G2708 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO675G6543 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO675G8000 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
PSO782G3350 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-09 63.5 65 46.2
SHI08605 Sapria himalayana HOM05D000105 ORTHO05D000014 6.6e-09 63.5 67 52.2
RcHm_v2.0_Chr7g0205361 Rosa chinensis HOM05D000023 ORTHO05D000014 8.6e-09 63.2 65 50.8
TWI74G0427 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 8.6e-09 63.2 65 53.8
arahy.Tifrunner.gnm1.ann1.F23DGP Arachis hypogaea HOM05D000023 ORTHO05D000014 1.1e-08 62.8 67 50.7
arahy.Tifrunner.gnm1.ann1.KV4G29 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.1e-08 62.8 67 50.7
PSO063G1377 Papaver somniferum HOM05D000023 ORTHO05D000014 1.1e-08 62.8 65 44.6
Gorai.011G116500 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.5e-08 62.4 65 53.8
PSO063G4346 Papaver somniferum HOM05D000023 ORTHO05D000014 1.5e-08 62.4 65 44.6
PSO585G0012 Papaver somniferum HOM05D000023 ORTHO05D000014 1.5e-08 62.4 65 46.2
Atru.chr9.1059 Acer truncatum HOM05D000023 ORTHO05D000014 1.9e-08 62.0 67 52.2
FvH4_5g06632 Fragaria vesca HOM05D000023 ORTHO05D000014 2.5e-08 61.6 67 49.3
TWI74G0763 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.5e-08 61.6 65 52.3
PSO170G1134 Papaver somniferum HOM05D000023 ORTHO05D000014 3.3e-08 61.2 65 44.6
CARHR107870 Cardamine hirsuta HOM05D000023 ORTHO05D000014 4.3e-08 60.8 67 53.7
FvH4_2g16371 Fragaria vesca HOM05D000023 ORTHO05D000014 5.6e-08 60.5 67 49.3
Lj2g0007711 Lotus japonicus HOM05D000023 ORTHO05D000014 9.5e-08 59.7 56 51.8
Lj5g0002668 Lotus japonicus HOM05D000023 ORTHO05D000014 1.2e-07 59.3 65 46.2
arahy.Tifrunner.gnm1.ann1.B0DQ39 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.6e-07 58.9 67 49.3
arahy.Tifrunner.gnm1.ann1.GA19A6 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.6e-07 58.9 67 49.3
arahy.Tifrunner.gnm1.ann1.LZ7HA6 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.6e-07 58.9 67 49.3
ClCG04G001860 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.6e-07 58.9 60 55.0
ECA233G1350 Erigeron canadensis HOM05D000023 ORTHO05D000001 2.8e-07 58.2 67 47.8
SHI36074 Sapria himalayana HOM05D000023 ORTHO05D000014 2.8e-07 58.2 54 57.4
TWI77G0487 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.8e-07 58.2 57 54.4
arahy.Tifrunner.gnm1.ann1.59J3RY Arachis hypogaea HOM05D000023 ORTHO05D000014 4.7e-07 57.4 57 54.4
TPR.G26330 Trifolium pratense HOM05D000023 ORTHO05D000014 4.7e-07 57.4 67 44.8
TWI18G0892 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 4.7e-07 57.4 65 49.2
TWI63G0054 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 4.7e-07 57.4 65 49.2
arahy.Tifrunner.gnm1.ann1.UX9V95 Arachis hypogaea HOM05D000023 ORTHO05D000014 6.2e-07 57.0 67 49.3
HanXRQChr06g0171651 Helianthus annuus HOM05D000023 ORTHO05D000014 6.2e-07 57.0 57 54.4
PSO063G7620 Papaver somniferum HOM05D000023 ORTHO05D000014 6.2e-07 57.0 65 41.5
TPR.G17787 Trifolium pratense HOM05D000023 ORTHO05D000014 6.2e-07 57.0 67 44.8
COL.COLO4_21793 Corchorus olitorius HOM05D000023 ORTHO05D000014 8.1e-07 56.6 67 46.3
Dinv11853 Davidia involucrata HOM05D000023 ORTHO05D000014 8.1e-07 56.6 65 43.1
PSO478G0613 Papaver somniferum HOM05D000023 ORTHO05D000014 1.1e-06 56.2 66 45.5
TPR.G40402 Trifolium pratense HOM05D000023 ORTHO05D000014 1.1e-06 56.2 67 43.3
arahy.Tifrunner.gnm1.ann1.47Q9LE Arachis hypogaea HOM05D000023 ORTHO05D000014 1.4e-06 55.8 67 46.3
Sp7g14400 Schrenkiella parvula HOM05D000023 ORTHO05D000014 1.4e-06 55.8 67 47.8
TPR.G510 Trifolium pratense HOM05D000023 ORTHO05D000014 1.4e-06 55.8 67 43.3
arahy.Tifrunner.gnm1.ann1.HID98C Arachis hypogaea HOM05D000023 ORTHO05D000014 1.8e-06 55.5 67 47.8
arahy.Tifrunner.gnm1.ann1.MNFB2B Arachis hypogaea HOM05D000023 ORTHO05D000014 2.3e-06 55.1 58 51.7
arahy.Tifrunner.gnm1.ann1.S7GMVN Arachis hypogaea HOM05D000023 ORTHO05D000014 2.3e-06 55.1 58 51.7
PSO017G6237 Papaver somniferum HOM05D000023 ORTHO05D000014 3.1e-06 54.7 67 43.3
arahy.Tifrunner.gnm1.ann1.RRIW7B Arachis hypogaea HOM05D000023 ORTHO05D000014 4.0e-06 54.3 67 46.3
SHI05427 Sapria himalayana HOM05D004755 ORTHO05D006137 4.0e-06 54.3 42 64.3
SHI10685 Sapria himalayana HOM05D000023 ORTHO05D000014 5.2e-06 53.9 42 64.3
TPR.G6135 Trifolium pratense HOM05D000023 ORTHO05D000014 5.2e-06 53.9 67 41.8
Dinv10684 Davidia involucrata HOM05D000023 ORTHO05D000014 6.8e-06 53.5 65 46.2
COL.COLO4_20882 Corchorus olitorius HOM05D000023 ORTHO05D000014 8.9e-06 53.1 66 45.5
ECA233G4406 Erigeron canadensis HOM05D000131 ORTHO05D000014 8.9e-06 53.1 57 49.1
Thhalv10029312m.g Eutrema salsugineum HOM05D000023 ORTHO05D000014 8.9e-06 53.1 65 43.1
TWI74G0862 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 8.9e-06 53.1 65 46.2


User provided reference genes

Program Settings