Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 0.0e+00 1375.5 709 100.0
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 0.0e+00 1075.8 619 91.1
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.6e-297 1025.8 543 97.6
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 2.2e-283 978.8 613 84.3
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 3.3e-279 964.9 541 92.2
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 6.8e-264 914.1 629 80.1
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.9e-245 852.8 476 94.5
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 2.4e-213 746.1 645 65.0
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 3.8e-206 722.2 636 65.9
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 2.5e-202 709.5 626 64.5
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 7.4e-202 708.0 623 66.5
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 2.8e-201 706.1 606 64.0
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 6.9e-200 701.4 655 62.3
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 4.5e-199 698.7 641 63.7
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 1.4e-197 693.7 593 65.6
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 4.2e-197 692.2 542 69.7
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 1.6e-193 680.2 613 62.8
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 2.2e-193 679.9 546 67.9
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.8e-193 679.5 550 67.8
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 3.7e-193 679.1 618 62.6
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 8.2e-193 677.9 633 62.2
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.4e-192 676.4 572 65.4
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 9.0e-192 674.5 632 61.6
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 1.2e-191 674.1 616 62.3
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 1.7e-190 670.2 635 61.4
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 1.1e-189 667.5 660 60.0
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 9.4e-189 664.5 623 62.3
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 1.8e-187 660.2 620 62.3
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 2.3e-187 659.8 613 62.2
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 2.3e-187 659.8 563 64.7
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 2.3e-187 659.8 647 61.1
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 5.1e-187 658.7 557 65.4
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 5.1e-187 658.7 618 61.8
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 1.1e-186 657.5 620 61.6
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 7.4e-186 654.8 595 61.5
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 1.7e-185 653.7 595 61.5
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 1.7e-185 653.7 618 61.0
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 2.2e-185 653.3 609 62.2
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 1.4e-184 650.6 577 63.8
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 2.4e-184 649.8 621 61.2
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 4.1e-184 649.0 525 66.1
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 6.9e-184 648.3 628 60.2
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 9.1e-184 647.9 622 60.8
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 9.1e-184 647.9 611 59.9
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 4.5e-183 645.6 620 60.5
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 1.0e-182 644.4 626 59.4
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 1.0e-182 644.4 625 60.6
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 1.3e-182 644.0 619 61.4
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 5.0e-182 642.1 583 61.7
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 6.5e-182 641.7 587 61.7
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 6.5e-182 641.7 623 59.4
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 8.5e-182 641.3 569 63.1
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 7.2e-181 638.3 589 62.3
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 9.4e-181 637.9 641 59.3
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 1.2e-180 637.5 633 59.4
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 1.6e-180 637.1 549 64.1
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 4.7e-180 635.6 533 65.7
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 1.4e-179 634.0 633 59.7
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 1.8e-179 633.6 548 64.1
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 6.7e-179 631.7 645 59.2
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 8.8e-179 631.3 640 58.9
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 4.4e-178 629.0 630 59.7
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 9.7e-178 627.9 569 61.0
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 4.8e-177 625.5 554 62.5
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 6.3e-177 625.2 540 63.9
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 1.4e-176 624.0 622 59.6
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 7.7e-175 618.2 628 57.0
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 7.7e-175 618.2 592 59.6
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 1.4e-173 614.0 600 60.2
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 7.2e-173 611.7 541 62.8
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 1.8e-171 607.1 650 56.2
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 6.3e-169 598.6 614 57.5
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 1.8e-168 597.0 634 54.9
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 5.3e-168 595.5 540 61.3
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 9.1e-168 594.7 611 58.6
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 5.9e-167 592.0 456 73.2
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 5.0e-166 589.0 647 58.1
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 1.3e-158 564.3 549 58.5
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 2.5e-157 560.1 560 58.9
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 4.2e-149 532.7 576 55.0
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 5.7e-146 522.3 589 55.2
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 9.8e-146 521.5 480 62.5
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 3.9e-142 509.6 534 58.6
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 3.9e-142 509.6 553 53.5
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 5.6e-133 479.2 474 58.2
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 2.0e-130 470.7 620 49.0
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 5.6e-125 452.6 462 60.8
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 3.7e-121 439.9 539 47.7
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 6.4e-113 412.5 476 55.9
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 3.2e-112 410.2 418 60.0
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 5.1e-110 402.9 571 45.7
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 1.3e-105 388.3 412 57.5
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 7.9e-103 379.0 424 55.7
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 7.6e-98 362.5 322 62.1
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 5.3e-83 313.2 449 46.1
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 2.0e-82 311.2 434 47.7
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 2.9e-73 280.8 579 35.4
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 7.7e-66 256.1 244 56.6
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 2.6e-58 231.1 178 69.1
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 7.0e-51 206.5 514 33.5
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 4.9e-36 157.1 126 73.0
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 4.1e-35 154.1 125 71.2
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 5.6e-32 143.7 134 55.2
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 1.8e-30 138.7 358 29.3
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 5.2e-30 137.1 141 54.6
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 5.7e-29 133.7 131 55.7
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 3.7e-28 131.0 98 68.4
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 4.9e-28 130.6 97 64.9
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 5.4e-27 127.1 162 46.3
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 9.5e-24 116.3 112 56.2
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.3e-20 105.9 81 66.7
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 7.0e-19 100.1 62 79.0
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 2.8e-15 88.2 186 34.9
Atru.chr11.2546 Acer truncatum HOM05D006816 ORTHO05D008666 8.1e-07 60.1 72 51.4


User provided reference genes

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