Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G0152 Fragaria x ananassa HOM05D004972 ORTHO05D006309 1.3e-179 632.9 311 100.0
FAN07G2072 Fragaria x ananassa HOM05D004972 ORTHO05D006309 1.1e-162 576.6 291 98.3
FAN17G1326 Fragaria x ananassa HOM05D004972 ORTHO05D006309 4.5e-135 485.0 273 89.4
FAN12G1431 Fragaria x ananassa HOM05D004972 ORTHO05D006309 2.3e-123 446.0 225 96.4
FAN12G3562 Fragaria x ananassa HOM05D004972 ORTHO05D006309 2.3e-123 446.0 225 96.4
FvH4_4g26160 Fragaria vesca HOM05D004972 ORTHO05D006309 8.7e-123 444.1 225 96.0
RcHm_v2.0_Chr4g0433731 Rosa chinensis HOM05D004972 ORTHO05D006309 3.3e-122 442.2 225 93.8
MD13G1028600 Malus domestica HOM05D004972 ORTHO05D006309 2.0e-111 406.4 225 85.8
MD16G1031300 Malus domestica HOM05D004972 ORTHO05D006309 7.7e-111 404.4 225 84.9
CANSAT01G2336 Cannabis sativa HOM05D004972 ORTHO05D006309 6.1e-108 394.8 225 84.0
Cfa008573 Carpinus fangiana HOM05D004972 ORTHO05D006309 1.5e-106 390.2 225 84.4
Prupe.1G321700 Prunus persica HOM05D004972 ORTHO05D006309 2.8e-105 386.0 225 84.4
Potri.010G115800 Populus trichocarpa HOM05D004972 ORTHO05D006309 1.1e-104 384.0 225 81.3
Thecc.04G114900 Theobroma cacao HOM05D004972 ORTHO05D006309 2.4e-104 382.9 225 81.8
Actinidia15243 Actinidia chinensis HOM05D004972 ORTHO05D006309 1.5e-103 380.2 225 79.6
Actinidia36689 Actinidia chinensis HOM05D004972 ORTHO05D006309 1.5e-103 380.2 225 79.6
CiPaw.05G247000 Carya illinoinensis HOM05D004972 ORTHO05D006309 2.0e-103 379.8 225 80.4
Manes.06G062200 Manihot esculenta HOM05D004972 ORTHO05D006309 2.0e-103 379.8 225 80.0
Ciclev10016597m.g Citrus clementina HOM05D004972 ORTHO05D006309 2.6e-103 379.4 225 80.0
GSVIVG01011786001 Vitis vinifera HOM05D004972 ORTHO05D006309 4.5e-103 378.6 225 80.4
CiPaw.06G013900 Carya illinoinensis HOM05D004972 ORTHO05D006309 5.9e-103 378.3 223 81.2
COL.COLO4_10156 Corchorus olitorius HOM05D004972 ORTHO05D006309 5.9e-103 378.3 225 80.9
Actinidia14945 Actinidia chinensis HOM05D004972 ORTHO05D006309 1.0e-102 377.5 225 79.1
Hma1.2p1_0114F.1_g055290 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 1.0e-102 377.5 225 80.0
Gohir.D12G057200 Gossypium hirsutum HOM05D004972 ORTHO05D006309 6.5e-102 374.8 225 80.4
Dinv05881 Davidia involucrata HOM05D004972 ORTHO05D006309 1.1e-101 374.0 224 79.5
Dinv16188 Davidia involucrata HOM05D004972 ORTHO05D006309 2.5e-101 372.9 225 80.0
CsaV3_5G034860 Cucumis sativus L. HOM05D004972 ORTHO05D006309 3.2e-101 372.5 225 80.0
Migut.L00755 Erythranthe guttata HOM05D004972 ORTHO05D006309 3.2e-101 372.5 225 77.3
Sopen05g004230 Solanum pennellii HOM05D004972 ORTHO05D006309 3.2e-101 372.5 225 76.0
Solyc05g008400.4 Solanum lycopersicum HOM05D004972 ORTHO05D006309 5.5e-101 371.7 225 75.6
Nitab4.5_0004692g0050 Nicotiana tabacum HOM05D004972 ORTHO05D006309 1.2e-100 370.5 223 77.1
TWI79G0317 Tripterygium wilfordii HOM05D004972 ORTHO05D006309 1.2e-100 370.5 225 80.4
Atru.chr11.981 Acer truncatum HOM05D004972 ORTHO05D006309 1.6e-100 370.2 225 78.7
Peaxi162Scf00205g00614 Petunia axillaris HOM05D004972 ORTHO05D006309 2.1e-100 369.8 225 76.0
PGSC0003DMG400030511 Solanum tuberosum HOM05D004972 ORTHO05D006309 2.1e-100 369.8 225 75.6
QL01p002347 Quercus lobata HOM05D004972 ORTHO05D006309 3.6e-100 369.0 279 67.7
Sed0026570 Sechium edule HOM05D004972 ORTHO05D006309 4.7e-100 368.6 225 80.0
Sc04g0005680 Simmondsia chinensis HOM05D004972 ORTHO05D006309 4.7e-100 368.6 226 78.8
Gohir.A12G057400 Gossypium hirsutum HOM05D004972 ORTHO05D006309 7.9e-100 367.9 225 79.1
CSS0013445 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 3.0e-99 365.9 226 78.3
CSS0024462 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 3.0e-99 365.9 226 78.3
AUR62014195 Chenopodium quinoa HOM05D004972 ORTHO05D006309 3.0e-99 365.9 225 77.3
Gohir.A07G173000 Gossypium hirsutum HOM05D004972 ORTHO05D006309 3.9e-99 365.5 225 79.1
Gorai.001G201700 Gossypium raimondii HOM05D004972 ORTHO05D006309 5.1e-99 365.2 225 79.1
Rhsim09G0068400 Rhododendron simsii HOM05D004972 ORTHO05D006309 5.1e-99 365.2 225 75.6
THA.LOC104825471 Tarenaya hassleriana HOM05D004972 ORTHO05D006309 5.1e-99 365.2 225 76.9
CAN.G1693.8 Capsicum annuum HOM05D004972 ORTHO05D006309 8.8e-99 364.4 225 76.0
Lj6C749G10 Lonicera japonica HOM05D004972 ORTHO05D006309 8.8e-99 364.4 224 78.6
Gohir.D07G180500 Gossypium hirsutum HOM05D004972 ORTHO05D006309 1.1e-98 364.0 225 78.7
Cc11_g09090 Coffea canephora HOM05D004972 ORTHO05D006309 6.3e-97 358.2 225 77.3
MSTRG.882 Avicennia marina HOM05D004972 ORTHO05D006309 3.1e-96 355.9 225 74.2
EL10Ac6g14241 Beta vulgaris HOM05D004972 ORTHO05D006309 3.1e-96 355.9 225 74.7
TAR629G1532 Trochodendron aralioides HOM05D004972 ORTHO05D006309 3.1e-96 355.9 225 76.9
Eucgr.G02212 Eucalyptus grandis HOM05D004972 ORTHO05D006309 7.0e-96 354.8 225 75.6
SGA_v2.0_scaffold50G18531 Striga asiatica HOM05D004972 ORTHO05D006309 7.0e-96 354.8 225 74.2
HanXRQChr08g0212881 Helianthus annuus HOM05D004972 ORTHO05D006309 1.2e-95 354.0 225 73.3
DCAR_030202 Daucus carota HOM05D004972 ORTHO05D006309 2.6e-95 352.8 226 73.5
Oeu044327.1 Olea europaea HOM05D004972 ORTHO05D006309 3.5e-95 352.4 225 74.7
Cpa.g.sc65.108 Carica papaya HOM05D004972 ORTHO05D006309 1.3e-94 350.5 197 83.8
Lsat_1_v5_gn_8_42761 Lactuca sativa HOM05D004972 ORTHO05D006309 1.7e-94 350.1 225 73.8
SalBow8G2598 Salvia bowleyana HOM05D004972 ORTHO05D006309 2.9e-94 349.4 226 73.5
VMungo0720G3073 Vigna mungo HOM05D004972 ORTHO05D006309 2.9e-94 349.4 227 73.1
Psat6g222200 Pisum sativum HOM05D004972 ORTHO05D006309 5.0e-94 348.6 225 72.9
Carub.0006s1141 Capsella rubella HOM05D004972 ORTHO05D006309 6.5e-94 348.2 225 74.7
Lalb_Chr06g0165661 Lupinus albus HOM05D004972 ORTHO05D006309 6.5e-94 348.2 225 73.8
Duzib133G0650 Durio zibethinus HOM05D004972 ORTHO05D006309 1.1e-93 347.4 197 83.8
Hund24992 Selenicereus undatus HOM05D004972 ORTHO05D006309 1.5e-93 347.1 272 64.0
AT5G13240 Arabidopsis thaliana HOM05D004972 ORTHO05D006309 3.2e-93 345.9 225 74.7
Thhalv10014602m.g Eutrema salsugineum HOM05D004972 ORTHO05D006309 4.2e-93 345.5 225 73.8
AL6G23850 Arabidopsis lyrata HOM05D004972 ORTHO05D006309 5.5e-93 345.1 225 74.2
Ca_11105_v3 Cicer arietinum L. HOM05D004972 ORTHO05D006309 5.5e-93 345.1 225 74.2
Phvul.007G035700 Phaseolus vulgaris HOM05D004972 ORTHO05D006309 7.2e-93 344.7 225 73.3
Lj5g0002039 Lotus japonicus HOM05D004972 ORTHO05D006309 2.1e-92 343.2 225 72.4
TPR.G4886 Trifolium pratense HOM05D004972 ORTHO05D006309 2.1e-92 343.2 225 72.4
C09p63840 Brassica napus HOM05D004972 ORTHO05D006309 2.7e-92 342.8 227 72.2
CARHR200210 Cardamine hirsuta HOM05D004972 ORTHO05D006309 6.1e-92 341.7 227 73.6
A10p24970 Brassica napus HOM05D004972 ORTHO05D006309 8.0e-92 341.3 225 72.9
HanXRQChr07g0189871 Helianthus annuus HOM05D004972 ORTHO05D006309 8.0e-92 341.3 225 70.2
BraA10t44559Z Brassica rapa HOM05D004972 ORTHO05D006309 1.8e-91 340.1 225 72.4
BcaC04g19133 Brassica carinata HOM05D004972 ORTHO05D006309 2.3e-91 339.7 225 72.4
BolC9t59224H Brassica oleracea HOM05D004972 ORTHO05D006309 2.3e-91 339.7 225 72.4
Nn2g14330 Nelumbo nucifera HOM05D004972 ORTHO05D006309 3.0e-91 339.3 225 72.4
Sp6g30750 Schrenkiella parvula HOM05D004972 ORTHO05D006309 3.9e-91 339.0 225 72.0
Nitab4.5_0004092g0040 Nicotiana tabacum HOM05D004972 ORTHO05D006309 1.5e-90 337.0 266 64.3
MBI07_g18719_MAGBIO Magnolia biondii HOM05D004972 ORTHO05D006309 2.6e-90 336.3 228 71.1
Haze_11044 Corylus avellana HOM05D004972 ORTHO05D006309 4.4e-90 335.5 225 74.7
Medtr1g108610 Medicago truncatula HOM05D004972 ORTHO05D006309 4.4e-90 335.5 232 69.8
ECA233G6099 Erigeron canadensis HOM05D004972 ORTHO05D006309 1.7e-89 333.6 225 71.1
Glyma.10G266000 Glycine max HOM05D004972 ORTHO05D006309 1.1e-88 330.9 225 70.7
Ah.02g128040 Amaranthus hybridus HOM05D004972 ORTHO05D006309 1.8e-88 330.1 228 69.7
Glyma.20G124600 Glycine max HOM05D004972 ORTHO05D006309 7.0e-88 328.2 226 70.8
vmacro01431 Vaccinium macrocarpon HOM05D004972 ORTHO05D006309 9.1e-88 327.8 208 75.0
SGA_v2.0_scaffold38G15047 Striga asiatica HOM05D004972 ORTHO05D006309 3.5e-87 325.9 225 67.1
Aa31LG3G14420 Aethionema arabicum HOM05D004972 ORTHO05D006309 1.9e-85 320.1 225 69.3
Nn6g34668 Nelumbo nucifera HOM05D004972 ORTHO05D006309 9.4e-85 317.8 225 70.2
arahy.Tifrunner.gnm1.ann1.DS7XTJ Arachis hypogaea HOM05D004972 ORTHO05D006309 1.6e-84 317.0 225 68.0
ClCG05G022260 Citrullus lanatus HOM05D004972 ORTHO05D006309 2.1e-84 316.6 225 71.6
PSO063G1195 Papaver somniferum HOM05D004972 ORTHO05D006309 2.1e-84 316.6 227 67.4
PSO782G3547 Papaver somniferum HOM05D004972 ORTHO05D006309 2.1e-84 316.6 227 67.0
arahy.Tifrunner.gnm1.ann1.F2FLG1 Arachis hypogaea HOM05D004972 ORTHO05D006309 4.7e-84 315.5 225 68.0
arahy.Tifrunner.gnm1.ann1.YXX0BK Arachis hypogaea HOM05D004972 ORTHO05D006309 5.2e-83 312.0 225 67.6
Aqoxy3G04360 Aquilegia oxysepala HOM05D004972 ORTHO05D006309 1.7e-81 307.0 225 64.9
MELO3C012297.2 Cucumis melo HOM05D004972 ORTHO05D006309 8.3e-81 304.7 177 83.1
unitig_0.g2334 Utricularia gibba HOM05D004972 ORTHO05D006309 1.1e-80 304.3 217 67.3
PGR119G0027 Punica granatum HOM05D004972 ORTHO05D006309 1.6e-79 300.4 225 68.0
HPP92_015449 Vanilla planifolia HOM05D004972 ORTHO05D006309 2.6e-74 283.1 228 61.4
CDE09G0103 Ceratophyllum demersum HOM05D004972 ORTHO05D006309 4.4e-74 282.3 228 62.3
Os04g0662900 Oryza sativa ssp. japonica HOM05D004972 ORTHO05D006309 6.3e-73 278.5 222 59.9
Gorai.008G060200 Gossypium raimondii HOM05D004972 ORTHO05D006309 1.8e-72 276.9 225 65.3
AUR62041239 Chenopodium quinoa HOM05D004972 ORTHO05D006309 9.1e-72 274.6 174 75.3
Migut.L00658 Erythranthe guttata HOM05D004972 ORTHO05D006309 9.1e-72 274.6 225 62.2
ATR0315G127 Amborella trichopoda HOM05D004972 ORTHO05D006309 4.2e-69 265.8 226 58.4
arahy.Tifrunner.gnm1.ann1.UKIC3J Arachis hypogaea HOM05D004972 ORTHO05D006309 1.2e-68 264.2 245 56.3
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 1.2e-68 264.2 260 54.6
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 1.2e-68 264.2 260 54.6
Zm00001eb246210 Zea mays HOM05D004972 ORTHO05D006309 2.1e-68 263.5 207 61.4
BolC2t06543H Brassica oleracea HOM05D004972 ORTHO05D006309 3.4e-66 256.1 229 60.7
FAN17G1863 Fragaria x ananassa HOM05D004972 ORTHO05D006309 1.7e-65 253.8 122 97.5
SEGI_23519 Sequoiadendron giganteum HOM05D004972 ORTHO05D006309 2.0e-63 246.9 225 53.3
Duzib138G1958 Durio zibethinus HOM05D004972 ORTHO05D006309 5.0e-62 242.3 250 54.4
Pp3c11_22300 Physcomitrium patens HOM05D004972 ORTHO05D006309 7.0e-56 221.9 225 49.3
C02p06000 Brassica napus HOM05D004972 ORTHO05D006309 3.5e-55 219.5 164 65.9
Mapoly0012s0169 Marchantia polymorpha HOM05D004972 ORTHO05D006309 1.9e-53 213.8 225 50.2
AagrBONN_evm.TU.Sc2ySwM_344.4231 Anthoceros agrestis HOM05D004972 ORTHO05D006309 6.4e-49 198.7 224 44.6
PRCOL_00004209 Prasinoderma coloniale HOM05D004972 ORTHO05D006309 4.0e-43 179.5 228 42.5
Cre08.g364250 Chlamydomonas reinhardtii HOM05D004972 ORTHO05D006309 5.2e-43 179.1 205 43.9
MCO09G688 Micromonas commoda HOM05D004972 ORTHO05D006309 1.7e-41 174.1 231 41.1
BcaNung01872 Brassica carinata HOM05D004972 ORTHO05D006309 1.6e-39 167.5 130 63.1
CSS0034104 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 2.1e-36 157.1 105 73.3
SHI16322 Sapria himalayana HOM05D004972 ORTHO05D006309 2.8e-36 156.8 207 45.4
CSS0029214 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 6.2e-36 155.6 105 72.4
Pp3c7_4620 Physcomitrium patens HOM05D004972 ORTHO05D006309 1.4e-32 144.4 150 52.0
Hma1.2p1_1593F.1_g292560 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 2.2e-25 120.6 72 75.0
Zm00001eb219440 Zea mays HOM05D009386 ORTHO05D011419 3.6e-20 103.2 77 55.8
Gorai.001G193400 Gossypium raimondii HOM05D004972 ORTHO05D029864 1.1e-19 101.7 105 53.3
Gohir.D01G091150 Gossypium hirsutum HOM05D004972 ORTHO05D029864 2.6e-18 97.1 122 45.1
CSS0010746 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.3e-17 94.7 51 82.4
CSS0040756 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.3e-17 94.7 51 82.4
CSS0044245 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 2.9e-17 93.6 51 82.4
Gorai.010G145600 Gossypium raimondii HOM05D004972 ORTHO05D029864 8.4e-17 92.0 79 59.5
Hma1.2p1_0813F.1_g222490 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 1.9e-16 90.9 51 80.4
CDE02G3434 Ceratophyllum demersum HOM05D004972 ORTHO05D000215 2.1e-15 87.4 76 61.8
Zm00001eb025950 Zea mays HOM05D004972 ORTHO05D006309 1.8e-14 84.3 75 52.0
SEGI_16480 Sequoiadendron giganteum HOM05D004972 ORTHO05D006309 1.1e-13 81.6 60 65.0
CSS0013064 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.8e-11 74.3 51 74.5
Gorai.001G223500 Gossypium raimondii HOM05D004972 ORTHO05D029864 6.9e-11 72.4 51 66.7
Gohir.D11G085800 Gossypium hirsutum HOM05D001136 ORTHO05D011526 1.3e-09 68.2 59 55.9
SHI16326 Sapria himalayana HOM05D004972 ORTHO05D006309 1.9e-08 64.3 78 52.6


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