Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 9.7e-141 503.4 249 100.0
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 2.0e-61 240.0 249 55.8
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 4.8e-55 218.8 249 52.6
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 9.7e-40 167.9 249 45.4
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 5.9e-37 158.7 247 43.3
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 3.9e-33 146.0 247 42.1
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 1.3e-31 141.0 74 97.3
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 5.0e-28 129.0 77 84.4
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 8.5e-28 128.3 84 78.6
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 1.1e-27 127.9 109 67.9
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 1.9e-27 127.1 84 76.2
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 4.2e-27 125.9 85 74.1
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 5.5e-27 125.6 84 77.4
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 5.5e-27 125.6 84 77.4
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 1.6e-26 124.0 85 74.1
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 1.6e-26 124.0 128 53.1
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 2.7e-26 123.2 84 75.0
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 2.7e-26 123.2 84 73.8
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 2.7e-26 123.2 85 75.3
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 3.6e-26 122.9 84 75.0
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 4.7e-26 122.5 83 77.1
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 6.1e-26 122.1 84 77.4
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 7.9e-26 121.7 80 73.8
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 1.0e-25 121.3 84 73.8
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 1.4e-25 120.9 75 80.0
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 1.4e-25 120.9 104 65.4
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 1.8e-25 120.6 84 75.0
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 1.8e-25 120.6 84 72.6
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 2.3e-25 120.2 86 72.1
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 2.3e-25 120.2 84 73.8
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 2.3e-25 120.2 76 80.3
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 3.0e-25 119.8 75 77.3
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 3.0e-25 119.8 79 74.7
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 3.0e-25 119.8 89 68.5
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 5.1e-25 119.0 121 56.2
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 5.1e-25 119.0 79 72.2
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 5.1e-25 119.0 78 76.9
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 5.1e-25 119.0 84 75.0
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 6.7e-25 118.6 84 71.4
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 8.8e-25 118.2 83 74.7
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 8.8e-25 118.2 99 61.6
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 1.1e-24 117.9 78 76.9
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 1.1e-24 117.9 84 72.6
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 2.0e-24 117.1 79 70.9
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 2.0e-24 117.1 84 73.8
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 2.0e-24 117.1 86 72.1
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 2.6e-24 116.7 84 71.4
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 2.6e-24 116.7 84 71.4
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 2.6e-24 116.7 84 73.8
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 3.3e-24 116.3 84 72.6
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 9.7e-24 114.8 84 72.6
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.7e-23 114.0 84 76.2
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 2.8e-23 113.2 79 70.9
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 3.7e-23 112.8 84 71.4
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 3.7e-23 112.8 84 72.6
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 3.7e-23 112.8 83 68.7
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 4.8e-23 112.5 72 79.2
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 6.3e-23 112.1 84 66.7
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 8.2e-23 111.7 71 77.5
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 8.2e-23 111.7 78 71.8
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 8.2e-23 111.7 78 71.8
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 8.2e-23 111.7 78 70.5
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 8.2e-23 111.7 84 70.2
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 8.2e-23 111.7 95 69.5
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 8.2e-23 111.7 95 69.5
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 1.1e-22 111.3 79 69.6
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 1.4e-22 110.9 79 69.6
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 1.8e-22 110.5 83 71.1
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 1.8e-22 110.5 78 69.2
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 2.4e-22 110.2 78 69.2
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 3.1e-22 109.8 90 62.2
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 3.1e-22 109.8 78 69.2
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 3.1e-22 109.8 86 65.1
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 4.1e-22 109.4 86 65.1
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 7.0e-22 108.6 75 70.7
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 7.0e-22 108.6 83 71.1
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 7.0e-22 108.6 95 61.1
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 7.0e-22 108.6 87 65.5
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 9.1e-22 108.2 78 69.2
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 9.1e-22 108.2 82 65.9
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 1.2e-21 107.8 91 65.9
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 2.0e-21 107.1 78 67.9
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 2.0e-21 107.1 81 70.4
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 2.6e-21 106.7 78 66.7
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 2.6e-21 106.7 78 66.7
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 2.6e-21 106.7 73 72.6
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 3.4e-21 106.3 85 65.9
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 3.4e-21 106.3 109 54.1
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 1.7e-20 104.0 72 73.6
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 1.7e-20 104.0 68 77.9
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 1.7e-20 104.0 58 89.7
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 2.2e-20 103.6 97 60.8
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 2.9e-20 103.2 72 75.0
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 5.0e-20 102.4 72 75.0
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 5.0e-20 102.4 58 91.4
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 8.5e-20 101.7 69 73.9
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 3.2e-19 99.8 78 66.7
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 4.2e-19 99.4 61 80.3
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 2.3e-17 93.6 75 60.0
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 9.7e-16 88.2 77 55.8
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 2.2e-15 87.0 67 68.7
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 2.2e-15 87.0 81 56.8
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 2.2e-15 87.0 68 67.6
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 6.3e-15 85.5 82 51.2
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 1.2e-13 81.3 82 48.8
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 1.0e-12 78.2 57 64.9
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.9e-12 76.6 114 44.7
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 3.8e-12 76.3 47 76.6
FAN08G2839 Fragaria x ananassa HOM05D008915 ORTHO05D001690 3.6e-10 69.7 49 69.4
FAN11G0910 Fragaria x ananassa HOM05D008915 ORTHO05D015127 5.2e-09 65.9 49 69.4
FAN04G0514 Fragaria x ananassa HOM05D008915 ORTHO05D015127 8.8e-09 65.1 39 74.4
FAN24G1563 Fragaria x ananassa HOM05D000564 ORTHO05D013325 7.5e-08 62.0 76 50.0
FAN14G0669 Fragaria x ananassa HOM05D008915 ORTHO05D015127 2.2e-07 60.5 49 63.3
FAN02G2661 Fragaria x ananassa HOM05D010037 ORTHO05D007515 8.2e-07 58.5 123 34.1
FAN11G1080 Fragaria x ananassa HOM05D008915 ORTHO05D199301 1.4e-06 57.8 35 80.0
FvH4_7g03301 Fragaria vesca HOM05D008915 ORTHO05D015127 2.4e-06 57.0 61 55.7
FAN05G1756 Fragaria x ananassa HOM05D006569 ORTHO05D007515 4.1e-06 56.2 137 33.6
FAN11G3997 Fragaria x ananassa HOM05D003589 ORTHO05D203843 4.1e-06 56.2 67 49.3
FAN24G0702 Fragaria x ananassa HOM05D003102 ORTHO05D013325 9.1e-06 55.1 37 73.0


User provided reference genes

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