Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.5e-181 639.4 327 100.0
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 6.9e-171 604.0 365 87.4
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 4.5e-170 601.3 365 87.1
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.0e-169 600.1 365 87.1
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 3.6e-159 565.1 372 83.1
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 6.3e-156 554.3 369 82.1
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 5.5e-152 541.2 368 78.3
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 8.3e-116 421.0 406 59.4
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 1.5e-104 383.6 398 56.8
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 3.9e-81 305.8 389 48.8
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 3.8e-76 289.3 404 46.5
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 3.8e-76 289.3 425 44.5
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 8.4e-76 288.1 397 46.3
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 5.4e-75 285.4 438 43.6
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 3.3e-72 276.2 403 45.7
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 1.0e-68 264.6 432 43.8
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 8.4e-68 261.5 420 42.4
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 1.6e-66 257.3 404 43.6
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 3.5e-66 256.1 405 42.2
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 5.1e-65 252.3 417 42.4
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 5.1e-65 252.3 390 44.9
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 3.4e-61 239.6 406 40.1
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 1.3e-60 237.7 418 39.2
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 1.7e-60 237.3 433 41.1
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 2.2e-60 236.9 224 56.2
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 2.5e-59 233.4 500 37.4
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 5.5e-59 232.3 406 41.4
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 1.6e-58 230.7 449 38.3
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 2.2e-55 220.3 438 39.7
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 8.2e-55 218.4 429 36.8
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 1.5e-53 214.2 445 38.0
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 1.0e-52 211.5 405 37.5
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 1.3e-52 211.1 441 38.1
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 2.9e-52 209.9 421 37.3
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 3.2e-51 206.5 406 38.9
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 7.2e-51 205.3 406 39.2
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 7.9e-50 201.8 425 37.6
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 1.0e-49 201.4 424 36.6
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 1.4e-49 201.1 393 38.4
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 3.0e-49 199.9 426 37.6
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 2.0e-48 197.2 428 36.9
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 2.5e-48 196.8 429 35.9
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 7.4e-48 195.3 392 37.8
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 6.3e-47 192.2 428 34.8
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 1.2e-45 188.0 351 38.5
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 1.5e-45 187.6 461 32.5
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 1.9e-43 180.6 416 35.3
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 3.2e-43 179.9 360 36.7
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 3.6e-42 176.4 368 38.6
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 1.8e-41 174.1 382 34.6
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 2.3e-41 173.7 402 34.1
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 3.9e-41 172.9 358 37.4
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 8.8e-41 171.8 110 80.9
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 1.5e-40 171.0 407 33.2
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 2.8e-39 166.8 485 32.4
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 5.9e-37 159.1 338 36.7
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 7.7e-37 158.7 209 49.3
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 1.0e-36 158.3 367 36.2
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 2.2e-36 157.1 448 31.9
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 9.4e-35 151.8 479 30.1
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 2.1e-34 150.6 340 34.1
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 3.6e-34 149.8 293 36.2
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 2.8e-31 140.2 408 33.8
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 1.6e-29 134.4 91 75.8
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 5.9e-29 132.5 423 31.2
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 1.0e-28 131.7 370 34.6
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 6.5e-28 129.0 301 33.2
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 1.5e-27 127.9 358 31.0
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 4.7e-26 122.9 397 30.2
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 8.0e-26 122.1 233 37.3
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 1.0e-25 121.7 425 30.1
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 2.3e-25 120.6 159 48.4
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 6.8e-25 119.0 122 54.1
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 1.5e-24 117.9 308 33.1
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 4.4e-24 116.3 159 42.8
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 4.4e-24 116.3 378 32.3
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 2.2e-23 114.0 309 34.3
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 8.3e-23 112.1 253 35.6
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 1.8e-22 110.9 316 30.7
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 6.5e-20 102.4 282 33.3
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 8.5e-20 102.1 325 30.2
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 6.8e-17 92.4 392 26.8
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 6.8e-17 92.4 238 31.9
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 1.2e-16 91.7 248 32.3
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 9.8e-16 88.6 309 29.1
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 9.1e-14 82.0 154 39.0
FAN17G3118 Fragaria x ananassa HOM05D007369 ORTHO05D009369 4.2e-11 73.2 51 76.5
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 6.8e-09 65.9 72 54.2
SEGI_26846 Sequoiadendron giganteum HOM05D007369 ORTHO05D009369 1.2e-08 65.1 169 26.6
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 2.0e-08 64.3 57 52.6
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 5.7e-08 62.8 396 26.5
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 3.7e-07 60.1 62 46.8


User provided reference genes

Program Settings