Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.5e-101 372.9 190 100.0
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.2e-100 369.0 189 98.9
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 3.7e-100 368.2 189 98.9
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 1.4e-62 243.4 131 98.5
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 8.4e-60 234.2 131 93.9
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 2.9e-52 209.1 132 87.1
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 1.0e-33 147.5 115 75.7
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 1.6e-31 140.2 126 61.9
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 8.2e-31 137.9 113 65.5
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 8.2e-31 137.9 126 57.9
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 1.4e-30 137.1 126 57.9
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 4.1e-30 135.6 122 62.3
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 5.3e-30 135.2 106 66.0
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 6.9e-30 134.8 122 61.5
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 9.0e-30 134.4 114 60.5
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 1.2e-29 134.0 98 68.4
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 1.5e-29 133.7 98 67.3
FAN25G1335 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.0e-29 133.3 108 63.0
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 2.0e-29 133.3 95 71.6
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 2.6e-29 132.9 125 58.4
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 2.6e-29 132.9 125 60.0
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 3.4e-29 132.5 126 57.1
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 4.5e-29 132.1 112 58.9
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 4.5e-29 132.1 110 62.7
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 5.9e-29 131.7 119 58.8
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 5.9e-29 131.7 100 68.0
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 7.6e-29 131.3 111 59.5
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 7.6e-29 131.3 99 67.7
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 7.6e-29 131.3 122 60.7
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 7.6e-29 131.3 99 66.7
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.0e-28 131.0 98 69.4
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.3e-28 130.6 98 69.4
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 1.3e-28 130.6 98 69.4
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 1.7e-28 130.2 123 56.9
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 1.7e-28 130.2 125 57.6
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 1.7e-28 130.2 106 62.3
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 1.7e-28 130.2 95 67.4
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 1.7e-28 130.2 97 69.1
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.7e-28 130.2 105 64.8
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 2.2e-28 129.8 119 55.5
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 2.2e-28 129.8 116 60.3
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 3.8e-28 129.0 140 52.1
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 3.8e-28 129.0 107 60.7
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 5.0e-28 128.6 108 60.2
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 8.4e-28 127.9 114 59.6
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 8.4e-28 127.9 104 62.5
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 1.1e-27 127.5 118 56.8
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 1.1e-27 127.5 120 57.5
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 1.9e-27 126.7 124 58.9
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 2.5e-27 126.3 124 55.6
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 3.2e-27 125.9 131 55.0
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 3.2e-27 125.9 102 69.6
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 4.2e-27 125.6 140 51.4
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 5.5e-27 125.2 126 56.3
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 5.5e-27 125.2 99 64.6
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 5.5e-27 125.2 92 68.5
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 5.5e-27 125.2 115 58.3
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 9.3e-27 124.4 136 55.1
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 9.3e-27 124.4 95 68.4
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 9.3e-27 124.4 115 57.4
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 1.2e-26 124.0 123 57.7
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 1.2e-26 124.0 106 61.3
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 1.2e-26 124.0 98 65.3
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 1.6e-26 123.6 123 58.5
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 4.6e-26 122.1 116 56.9
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 6.1e-26 121.7 118 55.1
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 1.0e-25 120.9 124 56.5
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 1.0e-25 120.9 122 57.4
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 1.8e-25 120.2 110 53.6
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 2.3e-25 119.8 104 57.7
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 3.0e-25 119.4 104 59.6
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 6.7e-25 118.2 93 65.6
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 8.7e-25 117.9 94 61.7
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 1.9e-24 116.7 116 55.2
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 4.3e-24 115.5 114 56.1
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 5.7e-24 115.2 83 69.9
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 5.7e-24 115.2 102 56.9
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 5.7e-24 115.2 86 66.3
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 7.4e-24 114.8 118 55.1
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 9.7e-24 114.4 95 60.0
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 2.8e-23 112.8 96 57.3
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 2.8e-23 112.8 108 57.4
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 3.7e-23 112.5 91 60.4
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 3.7e-23 112.5 91 60.4
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 4.8e-23 112.1 92 59.8
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 6.3e-23 111.7 120 51.7
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 6.3e-23 111.7 97 58.8
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 1.1e-22 110.9 91 59.3
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 1.1e-22 110.9 91 59.3
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 1.1e-22 110.9 91 59.3
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.1e-22 110.9 127 51.2
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 1.4e-22 110.5 111 54.1
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 4.1e-22 109.0 100 59.0
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 3.4e-21 105.9 83 63.9
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 1.3e-20 104.0 122 51.6
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 1.7e-20 103.6 79 63.3
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 2.9e-20 102.8 121 47.9
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 5.0e-20 102.1 89 59.6
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 3.6e-18 95.9 94 55.3
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 6.1e-18 95.1 162 40.1
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 1.4e-17 94.0 104 46.2
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 6.7e-17 91.7 74 62.2
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.1e-16 90.9 77 61.0
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 2.0e-16 90.1 101 44.6
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 2.5e-16 89.7 150 34.7
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 3.7e-15 85.9 95 45.3
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 3.7e-15 85.9 102 42.2
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 8.2e-15 84.7 65 67.7
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 4.1e-14 82.4 88 46.6
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 4.1e-14 82.4 78 55.1
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 1.2e-13 80.9 90 46.7
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 2.6e-13 79.7 65 60.0
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 1.3e-12 77.4 94 42.6
Haze_08531 Corylus avellana HOM05D007055 ORTHO05D008943 3.7e-07 59.3 71 52.1


User provided reference genes

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