Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G3892 Fragaria x ananassa HOM05D006634 ORTHO05D008282 1.3e-39 166.0 86 100.0
FvH4_3g32290 Fragaria vesca HOM05D006634 ORTHO05D008282 2.6e-37 158.3 86 95.3
FAN11G2087 Fragaria x ananassa HOM05D006634 ORTHO05D008282 2.6e-37 158.3 86 95.3
FAN25G2760 Fragaria x ananassa HOM05D006634 ORTHO05D008282 7.7e-37 156.8 85 92.9
FAN16G1798 Fragaria x ananassa HOM05D006634 ORTHO05D008282 5.0e-36 154.1 79 98.7
RcHm_v2.0_Chr5g0059081 Rosa chinensis HOM05D006634 ORTHO05D008282 8.2e-31 136.7 86 80.2
Prupe.6G101400 Prunus persica HOM05D006634 ORTHO05D008282 1.7e-28 129.0 86 75.6
MD03G1117700 Malus domestica HOM05D006634 ORTHO05D008282 3.8e-28 127.9 86 75.6
MD11G1136000 Malus domestica HOM05D006634 ORTHO05D008282 5.0e-28 127.5 86 76.7
CiPaw.13G113000 Carya illinoinensis HOM05D006634 ORTHO05D008282 4.4e-24 114.4 86 67.4
CANSAT54G0287 Cannabis sativa HOM05D006634 ORTHO05D008282 2.2e-23 112.1 86 64.0
CANSAT54G1094 Cannabis sativa HOM05D006634 ORTHO05D008282 2.2e-23 112.1 86 64.0
CANSAT54G0497 Cannabis sativa HOM05D006634 ORTHO05D008282 3.7e-23 111.3 87 63.2
CANSAT54G1359 Cannabis sativa HOM05D006634 ORTHO05D008282 3.7e-23 111.3 87 63.2
CANSAT54G1657 Cannabis sativa HOM05D006634 ORTHO05D008282 3.7e-23 111.3 87 63.2
CANSAT54G2640 Cannabis sativa HOM05D006634 ORTHO05D008282 3.7e-23 111.3 87 63.2
CANSAT54G2841 Cannabis sativa HOM05D006634 ORTHO05D008282 3.7e-23 111.3 87 63.2
CSS0041274 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 1.1e-22 109.8 86 64.0
Dinv32744 Davidia involucrata HOM05D006634 ORTHO05D008282 2.4e-22 108.6 86 62.8
TWI79G0418 Tripterygium wilfordii HOM05D006634 ORTHO05D008282 3.1e-22 108.2 86 64.0
Ciclev10029701m.g Citrus clementina HOM05D006634 ORTHO05D008282 9.1e-22 106.7 86 62.8
CANSAT54G1506 Cannabis sativa HOM05D006634 ORTHO05D008282 1.6e-21 105.9 87 60.9
GSVIVG01025186001 Vitis vinifera HOM05D006634 ORTHO05D008282 1.6e-21 105.9 86 60.5
Atru.chr3.3630 Acer truncatum HOM05D006634 ORTHO05D008282 4.5e-21 104.4 86 59.3
SalBow3G1265 Salvia bowleyana HOM05D006634 ORTHO05D008282 4.5e-21 104.4 86 62.8
TPR.G15540 Trifolium pratense HOM05D006634 ORTHO05D008282 4.5e-21 104.4 86 60.5
Gorai.009G107000 Gossypium raimondii HOM05D006634 ORTHO05D008282 5.9e-21 104.0 86 64.0
PGR102G2188 Punica granatum HOM05D006634 ORTHO05D008282 5.9e-21 104.0 86 60.5
Gohir.D05G102700 Gossypium hirsutum HOM05D006634 ORTHO05D008282 7.7e-21 103.6 86 64.0
Gohir.A05G103000 Gossypium hirsutum HOM05D006634 ORTHO05D008282 1.0e-20 103.2 86 61.6
Glyma.11G146700 Glycine max HOM05D006634 ORTHO05D008282 2.9e-20 101.7 86 59.3
Glyma.12G067600 Glycine max HOM05D006634 ORTHO05D008282 2.9e-20 101.7 85 58.8
Hma1.2p1_0058F.1_g032540 Hydrangea macrophylla HOM05D006634 ORTHO05D008282 2.9e-20 101.7 86 62.8
Psat7g225160 Pisum sativum HOM05D006634 ORTHO05D008282 2.9e-20 101.7 86 58.1
Lalb_Chr19g0137281 Lupinus albus HOM05D006634 ORTHO05D008282 5.0e-20 100.9 86 55.8
Thecc.09G340600 Theobroma cacao HOM05D006634 ORTHO05D008282 5.0e-20 100.9 80 63.8
Medtr4g459450 Medicago truncatula HOM05D006634 ORTHO05D008282 6.5e-20 100.5 86 59.3
Duzib168G0710 Durio zibethinus HOM05D006634 ORTHO05D008282 1.5e-19 99.4 86 60.5
CSS0031934 Camellia sinensis var. sinensis HOM05D006634 ORTHO05D008282 2.5e-19 98.6 86 60.5
Duzib150G1350 Durio zibethinus HOM05D006634 ORTHO05D008282 3.2e-19 98.2 86 59.3
CDE06G1545 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 5.5e-19 97.4 86 61.6
arahy.Tifrunner.gnm1.ann1.RYN47D Arachis hypogaea HOM05D006634 ORTHO05D008282 7.2e-19 97.1 86 55.8
Lj3g0007397 Lotus japonicus HOM05D006634 ORTHO05D008282 7.2e-19 97.1 86 57.0
Nn2g10789 Nelumbo nucifera HOM05D006634 ORTHO05D008282 7.2e-19 97.1 86 60.5
arahy.Tifrunner.gnm1.ann1.8AEA4E Arachis hypogaea HOM05D006634 ORTHO05D008282 9.4e-19 96.7 91 53.8
Eucgr.B02497 Eucalyptus grandis HOM05D006634 ORTHO05D008282 9.4e-19 96.7 86 57.0
Oeu002870.2 Olea europaea HOM05D006634 ORTHO05D008282 9.4e-19 96.7 88 55.7
Phvul.011G079100 Phaseolus vulgaris HOM05D006634 ORTHO05D008282 1.2e-18 96.3 86 55.8
Sed0017465 Sechium edule HOM05D006634 ORTHO05D008282 1.6e-18 95.9 86 53.5
THA.LOC104800608 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 2.1e-18 95.5 86 58.1
CARHR121380 Cardamine hirsuta HOM05D006634 ORTHO05D008282 4.7e-18 94.4 86 55.8
unitig_21.g20301 Utricularia gibba HOM05D006634 ORTHO05D008282 8.0e-18 93.6 86 53.5
DCAR_018812 Daucus carota HOM05D006634 ORTHO05D008282 1.4e-17 92.8 80 57.5
Manes.11G145100 Manihot esculenta HOM05D006634 ORTHO05D008282 1.4e-17 92.8 82 56.1
Sp4g11250 Schrenkiella parvula HOM05D006634 ORTHO05D008282 1.4e-17 92.8 86 54.7
Gohir.A08G197800 Gossypium hirsutum HOM05D006634 ORTHO05D008282 2.3e-17 92.0 86 55.8
Gorai.004G228800 Gossypium raimondii HOM05D006634 ORTHO05D008282 2.3e-17 92.0 86 55.8
CDE07G0066 Ceratophyllum demersum HOM05D006634 ORTHO05D008282 3.0e-17 91.7 82 61.0
Nitab4.5_0000650g0190 Nicotiana tabacum HOM05D006634 ORTHO05D008282 3.0e-17 91.7 86 55.8
AT2G28430 Arabidopsis thaliana HOM05D006634 ORTHO05D008282 4.0e-17 91.3 86 53.5
Actinidia03728 Actinidia chinensis HOM05D006634 ORTHO05D008282 5.2e-17 90.9 84 57.1
Aa31LG5G7790 Aethionema arabicum HOM05D006634 ORTHO05D008282 6.8e-17 90.5 86 54.7
AUR62039638 Chenopodium quinoa HOM05D006634 ORTHO05D008282 6.8e-17 90.5 86 59.3
ClCG03G001830 Citrullus lanatus HOM05D006634 ORTHO05D008282 6.8e-17 90.5 86 53.5
Rhsim01G0216700 Rhododendron simsii HOM05D006634 ORTHO05D008282 8.8e-17 90.1 86 54.7
Carub.0004s0938 Capsella rubella HOM05D006634 ORTHO05D008282 1.2e-16 89.7 86 53.5
AUR62024980 Chenopodium quinoa HOM05D006634 ORTHO05D008282 1.2e-16 89.7 86 59.3
CsaV3_1G033740 Cucumis sativus L. HOM05D006634 ORTHO05D008282 1.5e-16 89.4 87 51.7
Aqoxy2G01632 Aquilegia oxysepala HOM05D006634 ORTHO05D008282 2.6e-16 88.6 85 50.6
AL4G21590 Arabidopsis lyrata HOM05D006634 ORTHO05D008282 3.4e-16 88.2 86 52.3
Gohir.D08G215200 Gossypium hirsutum HOM05D006634 ORTHO05D008282 3.4e-16 88.2 86 54.7
vmacro14436 Vaccinium macrocarpon HOM05D006634 ORTHO05D008282 5.7e-16 87.4 86 53.5
BolC4t23789H Brassica oleracea HOM05D006634 ORTHO05D008282 9.8e-16 86.7 86 50.0
MELO3C020691.2 Cucumis melo HOM05D006634 ORTHO05D008282 9.8e-16 86.7 87 50.6
Thhalv10017488m.g Eutrema salsugineum HOM05D006634 ORTHO05D008282 9.8e-16 86.7 87 54.0
Manes.04G021400 Manihot esculenta HOM05D006634 ORTHO05D008282 9.8e-16 86.7 82 53.7
BcaNung07072 Brassica carinata HOM05D006634 ORTHO05D008282 1.3e-15 86.3 86 48.8
THA.LOC104826362 Tarenaya hassleriana HOM05D006634 ORTHO05D008282 1.3e-15 86.3 84 56.0
BraA07t29605Z Brassica rapa HOM05D006634 ORTHO05D008282 1.7e-15 85.9 86 50.0
Cpa.g.sc216.10 Carica papaya HOM05D006634 ORTHO05D008282 1.7e-15 85.9 75 58.7
A07p19000 Brassica napus HOM05D006634 ORTHO05D008282 2.2e-15 85.5 86 50.0
Sabra04G0142400 Salix brachista HOM05D006634 ORTHO05D008282 2.2e-15 85.5 82 54.9
Sopen11g028130 Solanum pennellii HOM05D006634 ORTHO05D008282 2.2e-15 85.5 86 50.0
Solyc11g069410.2 Solanum lycopersicum HOM05D006634 ORTHO05D008282 3.7e-15 84.7 86 50.0
C04p22950 Brassica napus HOM05D006634 ORTHO05D008282 4.8e-15 84.3 87 49.4
BcaB06g28214 Brassica carinata HOM05D006634 ORTHO05D008282 6.3e-15 84.0 86 51.2
Potri.004G210800 Populus trichocarpa HOM05D006634 ORTHO05D008282 1.4e-14 82.8 82 52.4
Lalb_Chr03g0027351 Lupinus albus HOM05D006634 ORTHO05D008282 2.4e-14 82.0 81 51.9
ECA238G2380 Erigeron canadensis HOM05D006634 ORTHO05D008282 7.0e-14 80.5 86 47.7
Peaxi162Scf00270g00818 Petunia axillaris HOM05D006634 ORTHO05D008282 9.1e-14 80.1 87 54.0
HanXRQChr02g0031651 Helianthus annuus HOM05D006634 ORTHO05D008282 1.2e-13 79.7 86 48.8
BolC4t27285H Brassica oleracea HOM05D006634 ORTHO05D008282 2.0e-13 79.0 82 47.6
ECA248G3376 Erigeron canadensis HOM05D006634 ORTHO05D008282 2.7e-13 78.6 86 46.5
Lsat_1_v5_gn_2_98520 Lactuca sativa HOM05D006634 ORTHO05D008282 1.0e-12 76.6 85 44.7
Zm00001eb221580 Zea mays HOM05D006634 ORTHO05D008282 1.3e-12 76.3 86 47.7
BraA04t17721Z Brassica rapa HOM05D006634 ORTHO05D008282 2.3e-12 75.5 82 45.1
HanXRQChr14g0452861 Helianthus annuus HOM05D006634 ORTHO05D008282 2.3e-12 75.5 82 48.8
QL01p022236 Quercus lobata HOM05D006634 ORTHO05D008282 2.3e-12 75.5 174 33.9
Actinidia25419 Actinidia chinensis HOM05D006634 ORTHO05D008282 1.5e-11 72.8 74 48.6
Zm00001eb045570 Zea mays HOM05D006634 ORTHO05D008282 1.5e-11 72.8 86 46.5
Cc01_g11130 Coffea canephora HOM05D006634 ORTHO05D008282 7.2e-11 70.5 64 53.1
Os10g0481400 Oryza sativa ssp. japonica HOM05D006634 ORTHO05D008282 7.2e-11 70.5 90 46.7
SalBow3G3864 Salvia bowleyana HOM05D006634 ORTHO05D008282 1.4e-09 66.2 86 50.0
Pp3c7_7440 Physcomitrium patens HOM05D006634 ORTHO05D008282 2.3e-09 65.5 92 41.3
Sed0015282 Sechium edule HOM05D006634 ORTHO05D008282 2.6e-08 62.0 86 38.4
MBI10_g13399_MAGBIO Magnolia biondii HOM05D006634 ORTHO05D008282 8.3e-07 57.0 45 64.4
Haze_23828 Corylus avellana HOM05D006634 ORTHO05D008282 1.8e-06 55.8 45 64.4


User provided reference genes

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