Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G3874 Fragaria x ananassa HOM05D004223 ORTHO05D004792 8.2e-82 307.0 154 100.0
FvH4_3g05960 Fragaria vesca HOM05D004223 ORTHO05D004792 7.5e-75 283.9 168 87.5
RcHm_v2.0_Chr5g0013511 Rosa chinensis HOM05D004223 ORTHO05D004792 7.2e-70 267.3 168 80.4
Prupe.4G077600 Prunus persica HOM05D004223 ORTHO05D004792 7.5e-67 257.3 169 77.5
MD10G1264700 Malus domestica HOM05D004223 ORTHO05D004792 2.0e-64 249.2 169 75.7
MD05G1287300 Malus domestica HOM05D004223 ORTHO05D004792 2.3e-60 235.7 169 71.0
FAN11G3669 Fragaria x ananassa HOM05D004223 ORTHO05D004792 4.0e-60 235.0 198 65.7
CiPaw.09G126400 Carya illinoinensis HOM05D004223 ORTHO05D004792 3.7e-50 201.8 170 65.3
CiPaw.10G093300 Carya illinoinensis HOM05D004223 ORTHO05D004792 3.5e-48 195.3 171 62.6
QL05p059118 Quercus lobata HOM05D004223 ORTHO05D004792 7.8e-48 194.1 171 63.2
PGR042G0116 Punica granatum HOM05D004223 ORTHO05D004792 6.6e-47 191.0 169 59.2
Dinv32277 Davidia involucrata HOM05D004223 ORTHO05D004792 5.6e-46 188.0 170 61.2
Actinidia19511 Actinidia chinensis HOM05D004223 ORTHO05D004792 7.3e-46 187.6 171 60.2
arahy.Tifrunner.gnm1.ann1.EM1NUG Arachis hypogaea HOM05D004223 ORTHO05D004792 2.8e-45 185.7 169 58.6
TWI53G0125 Tripterygium wilfordii HOM05D004223 ORTHO05D004792 6.2e-45 184.5 156 62.2
arahy.Tifrunner.gnm1.ann1.KB83YE Arachis hypogaea HOM05D004223 ORTHO05D004792 1.1e-44 183.7 169 58.0
Oeu019944.1 Olea europaea HOM05D004223 ORTHO05D004792 8.9e-44 180.6 169 59.8
Manes.17G067700 Manihot esculenta HOM05D004223 ORTHO05D004792 2.0e-43 179.5 171 60.8
Actinidia07682 Actinidia chinensis HOM05D004223 ORTHO05D004792 7.5e-43 177.6 172 57.6
CsaV3_1G032560 Cucumis sativus L. HOM05D004223 ORTHO05D004792 7.5e-43 177.6 170 58.2
Migut.H01375 Erythranthe guttata HOM05D004223 ORTHO05D004792 7.5e-43 177.6 170 60.6
MELO3C002724.2 Cucumis melo HOM05D004223 ORTHO05D004792 9.8e-43 177.2 170 58.2
SalBow7G0638 Salvia bowleyana HOM05D004223 ORTHO05D004792 1.3e-42 176.8 170 55.9
CANSAT35G1433 Cannabis sativa HOM05D004223 ORTHO05D004792 2.2e-42 176.0 172 57.6
Sed0009895 Sechium edule HOM05D004223 ORTHO05D004792 2.2e-42 176.0 170 57.6
Sopen02g019940 Solanum pennellii HOM05D004223 ORTHO05D004792 2.2e-42 176.0 170 58.8
TAR624G0476 Trochodendron aralioides HOM05D004223 ORTHO05D004792 4.9e-42 174.9 171 55.6
Phvul.002G194500 Phaseolus vulgaris HOM05D004223 ORTHO05D004792 6.4e-42 174.5 170 56.5
Thecc.06G153700 Theobroma cacao HOM05D004223 ORTHO05D004792 6.4e-42 174.5 171 57.9
Solyc02g070860.4 Solanum lycopersicum HOM05D004223 ORTHO05D004792 8.3e-42 174.1 170 58.2
Glyma.08G084000 Glycine max HOM05D004223 ORTHO05D004792 1.1e-41 173.7 170 56.5
GSVIVG01021418001 Vitis vinifera HOM05D004223 ORTHO05D004792 1.1e-41 173.7 171 57.3
Duzib235G1300 Durio zibethinus HOM05D004223 ORTHO05D004792 1.4e-41 173.3 171 57.3
CAN.G257.3 Capsicum annuum HOM05D004223 ORTHO05D004792 1.9e-41 172.9 169 58.0
Migut.M00929 Erythranthe guttata HOM05D004223 ORTHO05D004792 2.4e-41 172.6 169 58.0
DCAR_027947 Daucus carota HOM05D004223 ORTHO05D004792 5.4e-41 171.4 168 56.0
Nn3g20665 Nelumbo nucifera HOM05D004223 ORTHO05D004792 9.2e-41 170.6 171 53.8
Sc05g0006430 Simmondsia chinensis HOM05D004223 ORTHO05D004792 9.2e-41 170.6 169 52.7
Ciclev10015725m.g Citrus clementina HOM05D004223 ORTHO05D004792 1.2e-40 170.2 172 56.4
Glyma.05G129300 Glycine max HOM05D004223 ORTHO05D004792 4.6e-40 168.3 170 55.3
FAN16G0695 Fragaria x ananassa HOM05D004223 ORTHO05D004792 7.8e-40 167.5 151 64.9
Cc09_g08890 Coffea canephora HOM05D004223 ORTHO05D004792 1.0e-39 167.2 171 56.1
ClCG03G006980 Citrullus lanatus HOM05D004223 ORTHO05D004792 1.3e-39 166.8 149 61.7
Lsat_1_v5_gn_7_32901 Lactuca sativa HOM05D004223 ORTHO05D004792 3.9e-39 165.2 167 56.9
Lj4g0000090 Lotus japonicus HOM05D004223 ORTHO05D004792 1.9e-38 162.9 170 55.9
PSO541G2658 Papaver somniferum HOM05D004223 ORTHO05D004792 9.5e-38 160.6 171 53.8
Duzib160G0026 Durio zibethinus HOM05D004223 ORTHO05D004792 1.6e-37 159.8 171 54.4
ECA236G2733 Erigeron canadensis HOM05D004223 ORTHO05D004792 1.6e-37 159.8 156 58.3
HanXRQChr04g0118281 Helianthus annuus HOM05D004223 ORTHO05D004792 1.6e-37 159.8 169 56.2
unitig_37.g12104 Utricularia gibba HOM05D004223 ORTHO05D004792 2.8e-37 159.1 151 57.6
PSO675G0042 Papaver somniferum HOM05D004223 ORTHO05D004792 3.6e-37 158.7 171 53.8
Atru.chr10.1338 Acer truncatum HOM05D004223 ORTHO05D004792 1.8e-36 156.4 136 61.8
Gohir.A10G039200 Gossypium hirsutum HOM05D004223 ORTHO05D004792 2.3e-36 156.0 171 52.0
Gohir.D10G040000 Gossypium hirsutum HOM05D004223 ORTHO05D004792 2.3e-36 156.0 171 52.0
Gorai.011G042100 Gossypium raimondii HOM05D004223 ORTHO05D004792 2.3e-36 156.0 171 52.0
Aqoxy1G01765 Aquilegia oxysepala HOM05D004223 ORTHO05D004792 4.0e-36 155.2 163 54.0
EL10Ac8g19745 Beta vulgaris HOM05D004223 ORTHO05D004792 6.8e-36 154.5 196 45.9
ATR0585G108 Amborella trichopoda HOM05D004223 ORTHO05D004792 8.9e-36 154.1 165 49.7
VMungo0251G1974 Vigna mungo HOM05D004223 ORTHO05D004792 8.9e-36 154.1 119 68.1
Lalb_Chr12g0208891 Lupinus albus HOM05D004223 ORTHO05D004792 1.2e-35 153.7 170 53.5
Cfa023352 Carpinus fangiana HOM05D004223 ORTHO05D004792 5.8e-35 151.4 163 51.5
SGA_v2.0_scaffold1G00153 Striga asiatica HOM05D004223 ORTHO05D004792 5.8e-35 151.4 172 55.2
Dinv30715 Davidia involucrata HOM05D004223 ORTHO05D004792 3.7e-34 148.7 114 68.4
Actinidia39561 Actinidia chinensis HOM05D004223 ORTHO05D004792 4.9e-34 148.3 119 65.5
Medtr4g096650 Medicago truncatula HOM05D004223 ORTHO05D004792 3.2e-33 145.6 165 53.3
Nitab4.5_0001655g0250 Nicotiana tabacum HOM05D004223 ORTHO05D004792 7.1e-33 144.4 262 38.9
Actinidia22922 Actinidia chinensis HOM05D004223 ORTHO05D004792 1.2e-32 143.7 119 64.7
Os01g0751300 Oryza sativa ssp. japonica HOM05D004223 ORTHO05D004792 3.5e-32 142.1 163 47.2
Thecc.01G170900 Theobroma cacao HOM05D004223 ORTHO05D004792 1.3e-31 140.2 153 49.7
Duzib133G0675 Durio zibethinus HOM05D004223 ORTHO05D004792 3.0e-31 139.0 163 50.3
TPR.G4831 Trifolium pratense HOM05D004223 ORTHO05D004792 6.6e-31 137.9 165 52.1
unitig_92.g28154 Utricularia gibba HOM05D004223 ORTHO05D004792 8.6e-31 137.5 168 48.2
Psat7g090920 Pisum sativum HOM05D004223 ORTHO05D004792 1.5e-30 136.7 165 52.1
MD17G1137300 Malus domestica HOM05D004223 ORTHO05D004792 1.9e-30 136.3 168 47.0
TWI59G0075 Tripterygium wilfordii HOM05D004223 ORTHO05D004792 4.3e-30 135.2 163 47.2
Ciclev10031935m.g Citrus clementina HOM05D004223 ORTHO05D004792 5.6e-30 134.8 164 48.2
Gorai.001G092500 Gossypium raimondii HOM05D004223 ORTHO05D004792 7.3e-30 134.4 163 47.9
Zm00001eb153380 Zea mays HOM05D004223 ORTHO05D004792 1.6e-29 133.3 165 46.7
MSTRG.16215 Avicennia marina HOM05D004223 ORTHO05D004792 2.1e-29 132.9 122 62.3
Ca_06273_v3 Cicer arietinum L. HOM05D004223 ORTHO05D004792 2.1e-29 132.9 168 46.4
Lsat_1_v5_gn_7_7501 Lactuca sativa HOM05D004223 ORTHO05D004792 2.1e-29 132.9 172 50.6
QL08p044806 Quercus lobata HOM05D004223 ORTHO05D004792 2.8e-29 132.5 120 57.5
Rhsim02G0155900 Rhododendron simsii HOM05D004223 ORTHO05D004792 2.8e-29 132.5 105 66.7
SGA_v2.0_scaffold333G49006 Striga asiatica HOM05D004223 ORTHO05D004792 3.6e-29 132.1 214 45.3
Psat2g016680 Pisum sativum HOM05D004223 ORTHO05D004792 8.1e-29 131.0 166 45.2
Atru.chr6.2065 Acer truncatum HOM05D004223 ORTHO05D004792 1.4e-28 130.2 146 50.7
Gohir.A07G080900 Gossypium hirsutum HOM05D004223 ORTHO05D004792 2.4e-28 129.4 165 47.3
MSTRG.7472 Avicennia marina HOM05D004223 ORTHO05D004792 3.1e-28 129.0 106 62.3
SalBow8G4695 Salvia bowleyana HOM05D004223 ORTHO05D004792 4.0e-28 128.6 200 44.0
SalBow8G5598 Salvia bowleyana HOM05D004223 ORTHO05D004792 4.0e-28 128.6 200 44.0
ClCG02G018450 Citrullus lanatus HOM05D004223 ORTHO05D004792 8.9e-28 127.5 168 45.8
Nitab4.5_0001040g0160 Nicotiana tabacum HOM05D004223 ORTHO05D004792 2.0e-27 126.3 222 40.5
TPR.G12676 Trifolium pratense HOM05D004223 ORTHO05D004792 2.0e-27 126.3 169 45.0
MELO3C019676.2 Cucumis melo HOM05D004223 ORTHO05D004792 5.8e-27 124.8 167 45.5
RcHm_v2.0_Chr2g0151741 Rosa chinensis HOM05D004223 ORTHO05D004792 7.6e-27 124.4 160 48.1
Potri.005G203600 Populus trichocarpa HOM05D004223 ORTHO05D004792 9.9e-27 124.0 166 43.4
FvH4_6g38510 Fragaria vesca HOM05D004223 ORTHO05D004792 1.7e-26 123.2 171 45.0
CsaV3_6G013790 Cucumis sativus L. HOM05D004223 ORTHO05D004792 3.8e-26 122.1 165 45.5
Medtr5g091370 Medicago truncatula HOM05D004223 ORTHO05D004792 4.9e-26 121.7 167 41.9
AUR62030243 Chenopodium quinoa HOM05D004223 ORTHO05D004792 1.9e-25 119.8 153 45.1
Potri.002G058500 Populus trichocarpa HOM05D004223 ORTHO05D004792 5.4e-25 118.2 166 42.2
Prupe.3G175100 Prunus persica HOM05D004223 ORTHO05D004792 7.1e-25 117.9 168 43.5
Sed0004086 Sechium edule HOM05D004223 ORTHO05D004792 9.3e-25 117.5 164 45.1
Sed0020532 Sechium edule HOM05D004223 ORTHO05D004792 9.3e-25 117.5 162 44.4
Gohir.D07G086500 Gossypium hirsutum HOM05D004223 ORTHO05D004792 1.2e-24 117.1 127 52.0
Oeu040112.1 Olea europaea HOM05D004223 ORTHO05D004792 1.2e-24 117.1 108 57.4
AL5G40980 Arabidopsis lyrata HOM05D004223 ORTHO05D004792 1.7e-23 113.2 170 40.0
THA.LOC104803347 Tarenaya hassleriana HOM05D004223 ORTHO05D004792 1.7e-23 113.2 170 40.6
HPP92_021479 Vanilla planifolia HOM05D004223 ORTHO05D004792 1.7e-23 113.2 164 43.3
Aa31LG1G24730 Aethionema arabicum HOM05D004223 ORTHO05D004792 3.0e-23 112.5 175 41.7
Ah.14g086580 Amaranthus hybridus HOM05D004223 ORTHO05D004792 8.7e-23 110.9 152 44.1
AT3G59090 Arabidopsis thaliana HOM05D004223 ORTHO05D004792 8.7e-23 110.9 173 39.9
Pp3c5_22420 Physcomitrium patens HOM05D004223 ORTHO05D004792 1.9e-22 109.8 166 42.2
BraA07t30092Z Brassica rapa HOM05D000230 ORTHO05D000176 5.6e-22 108.2 170 39.4
Pp3c6_6380 Physcomitrium patens HOM05D004223 ORTHO05D004792 1.3e-21 107.1 163 38.7
SMO296G0001 Selaginella moellendorffii HOM05D004223 ORTHO05D004792 2.8e-21 105.9 170 40.0
Pp3c25_8320 Physcomitrium patens HOM05D004223 ORTHO05D004792 4.8e-21 105.1 166 39.2
PGR042G1019 Punica granatum HOM05D004223 ORTHO05D004792 1.1e-20 104.0 169 40.2
COL.COLO4_07169 Corchorus olitorius HOM05D000230 ORTHO05D000176 2.4e-20 102.8 100 58.0
C06p25880 Brassica napus HOM05D000230 ORTHO05D000176 4.0e-20 102.1 170 37.6
BolC6t37750H Brassica oleracea HOM05D000230 ORTHO05D000176 4.0e-20 102.1 170 37.6
BcaC08g44958 Brassica carinata HOM05D000230 ORTHO05D000176 5.3e-20 101.7 121 46.3
A07p24480 Brassica napus HOM05D000230 ORTHO05D000176 6.9e-20 101.3 120 45.8
BcaC07g40242 Brassica carinata HOM05D004223 ORTHO05D004792 9.0e-20 100.9 120 45.0
CARHR169510 Cardamine hirsuta HOM05D004223 ORTHO05D004792 1.2e-19 100.5 170 36.5
Sp5g03900 Schrenkiella parvula HOM05D004223 ORTHO05D004792 1.2e-19 100.5 120 45.8
BcaB02g07485 Brassica carinata HOM05D004223 ORTHO05D004792 3.4e-19 99.0 120 45.8
Carub.0005s2585 Capsella rubella HOM05D004223 ORTHO05D004792 3.4e-19 99.0 118 46.6
Thhalv10006050m.g Eutrema salsugineum HOM05D004223 ORTHO05D004792 3.4e-19 99.0 120 45.0
Mapoly0056s0052 Marchantia polymorpha HOM05D004223 ORTHO05D004792 3.4e-19 99.0 167 39.5
C08p34260 Brassica napus HOM05D004223 ORTHO05D004792 5.8e-19 98.2 120 45.8
CDE09G0669 Ceratophyllum demersum HOM05D004223 ORTHO05D004792 7.1e-17 91.3 78 61.5
BraA09t40587Z Brassica rapa HOM05D004223 ORTHO05D004792 2.1e-16 89.7 133 40.6
BcaC07g40241 Brassica carinata HOM05D004223 ORTHO05D004792 7.9e-16 87.8 69 60.9
BolC8t51023H Brassica oleracea HOM05D004223 ORTHO05D004792 7.9e-16 87.8 69 60.9
Actinidia22925 Actinidia chinensis HOM05D004223 ORTHO05D004792 1.7e-15 86.7 59 69.5
Peaxi162Scf00214g01114 Petunia axillaris HOM05D004223 ORTHO05D004792 1.5e-14 83.6 138 40.6
Oeu046871.2 Olea europaea HOM05D004223 ORTHO05D004792 2.5e-14 82.8 79 58.2
TPR.G14049 Trifolium pratense HOM05D004223 ORTHO05D004792 2.8e-13 79.3 98 48.0
A09p51500 Brassica napus HOM05D004223 ORTHO05D004792 4.0e-12 75.5 129 38.0
PGSC0003DMG400012960 Solanum tuberosum HOM05D004223 ORTHO05D004792 3.4e-11 72.4 78 57.7
DCAR_003936 Daucus carota HOM05D004223 ORTHO05D004792 7.6e-11 71.2 79 53.2
FAN02G1578 Fragaria x ananassa HOM05D004223 ORTHO05D004792 9.9e-11 70.9 137 38.0
vmacro10943 Vaccinium macrocarpon HOM05D004223 ORTHO05D004792 3.8e-10 68.9 44 75.0
Hund21517 Selenicereus undatus HOM05D004223 ORTHO05D004792 2.4e-09 66.2 149 36.2
Sabra02G0047600 Salix brachista HOM05D004223 ORTHO05D004792 7.1e-09 64.7 78 48.7
QL05p059167 Quercus lobata HOM05D004223 ORTHO05D004792 2.1e-08 63.2 60 55.0
vmacro10944 Vaccinium macrocarpon HOM05D004223 ORTHO05D004792 4.6e-08 62.0 74 50.0
FAN14G4329 Fragaria x ananassa HOM05D004223 ORTHO05D004792 6.7e-07 58.2 102 37.3
Dinv05253 Davidia involucrata HOM05D004223 ORTHO05D004792 2.5e-06 56.2 52 57.7
FAN05G0022 Fragaria x ananassa HOM05D004223 ORTHO05D004792 5.6e-06 55.1 100 37.0


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