Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G3832 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.2e-50 200.3 102 100.0
FAN25G2290 Fragaria x ananassa HOM05D000007 ORTHO05D035815 8.6e-19 97.1 50 94.0
FAN11G1379 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.3e-18 94.7 51 92.2
FAN16G1021 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.3e-18 94.7 51 92.2
FvH4_6g32080 Fragaria vesca HOM05D000007 ORTHO05D000039 9.8e-15 83.6 51 78.4
FAN14G0366 Fragaria x ananassa HOM05D000007 ORTHO05D000039 9.8e-15 83.6 51 78.4
RcHm_v2.0_Chr3g0482251 Rosa chinensis HOM05D000007 ORTHO05D000039 1.3e-11 73.2 71 57.7
RcHm_v2.0_Chr3g0482231 Rosa chinensis HOM05D000007 ORTHO05D000039 3.0e-11 72.0 71 56.3
RcHm_v2.0_Chr1g0350191 Rosa chinensis HOM05D000007 ORTHO05D000039 5.6e-10 67.8 61 59.0
FAN11G3730 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.6e-09 66.2 62 54.8
FAN28G1507 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.6e-09 66.2 62 54.8
RcHm_v2.0_Chr5g0075091 Rosa chinensis HOM05D000007 ORTHO05D000039 1.6e-09 66.2 59 57.6
FvH4_5g35130 Fragaria vesca HOM05D000007 ORTHO05D000039 2.1e-09 65.9 61 54.1
FvH4_7g11670 Fragaria vesca HOM05D000007 ORTHO05D000039 2.1e-09 65.9 66 51.5
FvH4_3g18972 Fragaria vesca HOM05D000007 ORTHO05D000039 2.8e-09 65.5 59 49.2
FvH4_4g11831 Fragaria vesca HOM05D064558 ORTHO05D000039 3.6e-09 65.1 51 54.9
FvH4_3g42390 Fragaria vesca HOM05D000007 ORTHO05D000039 4.7e-09 64.7 61 54.1
FAN10G0938 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.7e-09 64.7 65 52.3
Lj1C663T1 Lonicera japonica HOM05D000007 ORTHO05D000039 6.2e-09 64.3 58 50.0
Prupe.4G210300 Prunus persica HOM05D000007 ORTHO05D000039 6.2e-09 64.3 58 55.2
Lj1C663T2 Lonicera japonica HOM05D000007 ORTHO05D000039 8.0e-09 63.9 51 56.9
Lj1C671T7 Lonicera japonica HOM05D000007 ORTHO05D000039 8.0e-09 63.9 51 56.9
FAN06G0669 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.1e-08 63.5 70 52.9
FAN06G4010 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.1e-08 63.5 70 52.9
FAN03G2844 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.4e-08 63.2 43 69.8
FAN06G1206 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.4e-08 63.2 61 52.5
FAN10G1832 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.4e-08 63.2 61 52.5
FAN10G3302 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.4e-08 63.2 61 52.5
FAN01G1835 Fragaria x ananassa HOM05D000921 ORTHO05D002852 1.8e-08 62.8 47 68.1
FAN06G2092 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.8e-08 62.8 61 52.5
FAN10G3851 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.8e-08 62.8 79 48.1
Prupe.4G156000 Prunus persica HOM05D000007 ORTHO05D000039 3.1e-08 62.0 62 53.2
RcHm_v2.0_Chr5g0031751 Rosa chinensis HOM05D000007 ORTHO05D000039 3.1e-08 62.0 67 47.8
FvH4_6g25310 Fragaria vesca HOM05D000007 ORTHO05D000039 4.0e-08 61.6 51 52.9
FvH4_7g11690 Fragaria vesca HOM05D000007 ORTHO05D000039 5.2e-08 61.2 61 57.4
FAN11G0526 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.2e-08 61.2 65 47.7
FAN16G1212 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.2e-08 61.2 46 63.0
FvH4_3g33911 Fragaria vesca HOM05D000007 ORTHO05D000039 6.8e-08 60.8 46 60.9
FvH4_3g41900 Fragaria vesca HOM05D000007 ORTHO05D000039 1.2e-07 60.1 61 50.8
FvH4_5g29450 Fragaria vesca HOM05D000007 ORTHO05D000039 1.2e-07 60.1 68 51.5
FAN11G3185 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-07 60.1 61 50.8
RcHm_v2.0_Chr2g0116451 Rosa chinensis HOM05D000007 ORTHO05D000039 1.2e-07 60.1 67 47.8
RcHm_v2.0_Chr5g0075881 Rosa chinensis HOM05D000007 ORTHO05D000039 1.2e-07 60.1 61 50.8
FAN03G2643 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.5e-07 59.7 46 63.0
FAN19G1046 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.5e-07 59.7 75 46.7
FAN23G1504 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.5e-07 59.7 60 51.7
FAN25G3153 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.5e-07 59.7 61 52.5
FvH4_1g08281 Fragaria vesca HOM05D000007 ORTHO05D000039 2.0e-07 59.3 60 50.0
FvH4_1g22270 Fragaria vesca HOM05D000007 ORTHO05D000039 2.0e-07 59.3 75 46.7
FvH4_3g16521 Fragaria vesca HOM05D000007 ORTHO05D000039 2.0e-07 59.3 61 49.2
FAN03G1917 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.0e-07 59.3 66 47.0
FAN19G0424 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.0e-07 59.3 60 50.0
Prupe.3G110400 Prunus persica HOM05D000007 ORTHO05D000039 2.0e-07 59.3 58 50.0
FAN28G0121 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.6e-07 58.9 61 50.8
Prupe.3G110600 Prunus persica HOM05D000007 ORTHO05D000039 2.6e-07 58.9 58 50.0
RcHm_v2.0_Chr2g0116421 Rosa chinensis HOM05D000007 ORTHO05D000039 3.4e-07 58.5 58 50.0
FAN26G0601 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.4e-07 58.2 65 49.2
FAN26G2697 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.4e-07 58.2 65 49.2
Peaxi162Scf00038g00024 Petunia axillaris HOM05D000007 ORTHO05D000039 4.4e-07 58.2 58 50.0
COL.COLO4_09452 Corchorus olitorius HOM05D000007 ORTHO05D000039 5.8e-07 57.8 46 63.0
FvH4_1g26450 Fragaria vesca HOM05D000007 ORTHO05D000039 5.8e-07 57.8 61 49.2
FvH4_3g42380 Fragaria vesca HOM05D000007 ORTHO05D000039 5.8e-07 57.8 61 49.2
FAN19G1125 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.8e-07 57.8 61 49.2
Nitab4.5_0000883g0210 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.8e-07 57.8 67 47.8
Potri.011G121200 Populus trichocarpa HOM05D000007 ORTHO05D000039 5.8e-07 57.8 42 61.9
Sabra11G0106500 Salix brachista HOM05D000007 ORTHO05D000039 5.8e-07 57.8 48 54.2
Thecc.07G075500 Theobroma cacao HOM05D000007 ORTHO05D000039 5.8e-07 57.8 58 50.0
FAN05G5128 Fragaria x ananassa HOM05D004117 ORTHO05D004520 7.5e-07 57.4 55 50.9
FAN21G2298 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.5e-07 57.4 50 58.0
Prupe.1G172200 Prunus persica HOM05D000007 ORTHO05D000039 7.5e-07 57.4 58 46.6
FAN11G0403 Fragaria x ananassa HOM05D000007 ORTHO05D000039 9.8e-07 57.0 78 41.0
Lj1A671T53 Lonicera japonica HOM05D000007 ORTHO05D000039 9.8e-07 57.0 51 51.0
Prupe.1G172300 Prunus persica HOM05D000007 ORTHO05D000039 1.3e-06 56.6 64 42.2
Prupe.8G042400 Prunus persica HOM05D000007 ORTHO05D000039 1.3e-06 56.6 84 38.1
COL.COLO4_07202 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.7e-06 56.2 75 40.0
FAN09G2562 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.7e-06 56.2 54 51.9
FAN09G3937 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.7e-06 56.2 54 51.9
QL08p020302 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-06 56.2 68 42.6
RcHm_v2.0_Chr5g0030031 Rosa chinensis HOM05D000007 ORTHO05D000039 1.7e-06 56.2 57 52.6
Prupe.5G081900 Prunus persica HOM05D000007 ORTHO05D000039 2.2e-06 55.8 77 41.6
FAN16G3299 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.9e-06 55.5 67 44.8
FAN26G0097 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.9e-06 55.5 61 47.5
Lj1A671T54 Lonicera japonica HOM05D000007 ORTHO05D000039 2.9e-06 55.5 51 49.0
Peaxi162Scf00469g00087 Petunia axillaris HOM05D000007 ORTHO05D000039 2.9e-06 55.5 58 48.3
QL03p053036 Quercus lobata HOM05D000007 ORTHO05D000039 2.9e-06 55.5 58 43.1
QL05p081906 Quercus lobata HOM05D000007 ORTHO05D000039 2.9e-06 55.5 58 43.1
FAN19G1395 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.7e-06 55.1 61 49.2
RcHm_v2.0_Chr5g0075101 Rosa chinensis HOM05D000007 ORTHO05D000039 3.7e-06 55.1 61 49.2
Sabra11G0106100 Salix brachista HOM05D000007 ORTHO05D000039 3.7e-06 55.1 48 50.0
PGSC0003DMG400020424 Solanum tuberosum HOM05D000007 ORTHO05D000039 3.7e-06 55.1 58 48.3
FvH4_3g39330 Fragaria vesca HOM05D000007 ORTHO05D000039 4.9e-06 54.7 50 54.0
FAN11G3224 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.9e-06 54.7 50 54.0
Nitab4.5_0000883g0220 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.9e-06 54.7 51 47.1
RcHm_v2.0_Chr5g0031771 Rosa chinensis HOM05D000007 ORTHO05D000039 4.9e-06 54.7 54 48.1
FAN05G0280 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.4e-06 54.3 35 71.4
FAN28G1167 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.4e-06 54.3 48 54.2
Prupe.2G255600 Prunus persica HOM05D000007 ORTHO05D000039 6.4e-06 54.3 66 43.9
Prupe.2G255800 Prunus persica HOM05D000207 ORTHO05D001482 6.4e-06 54.3 66 43.9
FvH4_3g41891 Fragaria vesca HOM05D000007 ORTHO05D000039 8.3e-06 53.9 61 47.5
FvH4_6g27880 Fragaria vesca HOM05D000007 ORTHO05D000039 8.3e-06 53.9 48 56.2
FAN11G1650 Fragaria x ananassa HOM05D000007 ORTHO05D000039 8.3e-06 53.9 78 39.7
FAN16G1834 Fragaria x ananassa HOM05D000007 ORTHO05D000039 8.3e-06 53.9 61 47.5
QL03p053039 Quercus lobata HOM05D000007 ORTHO05D030519 8.3e-06 53.9 58 43.1
QL03p053061 Quercus lobata HOM05D000007 ORTHO05D000039 8.3e-06 53.9 58 46.6
QL05p081910 Quercus lobata HOM05D000007 ORTHO05D030519 8.3e-06 53.9 58 43.1
QL05p081935 Quercus lobata HOM05D000007 ORTHO05D000039 8.3e-06 53.9 58 46.6


User provided reference genes

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