Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G3820 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.5e-29 132.1 62 100.0
FAN11G3620 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.2e-16 87.8 56 78.6
FAN11G0487 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.3e-14 82.4 56 75.0
RcHm_v2.0_Chr5g0080241 Rosa chinensis HOM05D000092 ORTHO05D000042 3.9e-14 80.9 56 71.4
RcHm_v2.0_Chr5g0080371 Rosa chinensis HOM05D000092 ORTHO05D000042 6.6e-14 80.1 56 71.4
RcHm_v2.0_Chr5g0080281 Rosa chinensis HOM05D000092 ORTHO05D000042 1.1e-13 79.3 56 71.4
RcHm_v2.0_Chr5g0079791 Rosa chinensis HOM05D000092 ORTHO05D000042 2.1e-12 75.1 55 67.3
RcHm_v2.0_Chr5g0080311 Rosa chinensis HOM05D000092 ORTHO05D000042 2.9e-09 64.7 56 58.9
FAN11G0410 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.7e-09 64.3 56 58.9
RcHm_v2.0_Chr5g0064081 Rosa chinensis HOM05D001215 ORTHO05D000042 6.4e-09 63.5 56 60.7
FvH4_3g37980 Fragaria vesca HOM05D000092 ORTHO05D000042 8.3e-09 63.2 56 57.1
RcHm_v2.0_Chr5g0064111 Rosa chinensis HOM05D000092 ORTHO05D000042 1.9e-08 62.0 56 57.1
RcHm_v2.0_Chr5g0069731 Rosa chinensis HOM05D000092 ORTHO05D000042 1.9e-08 62.0 55 54.5
FAN21G3596 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.4e-08 61.6 55 54.5
FvH4_5g27640 Fragaria vesca HOM05D000092 ORTHO05D000042 5.4e-08 60.5 56 57.1
FvH4_7g06680 Fragaria vesca HOM05D000092 ORTHO05D000042 5.4e-08 60.5 57 56.1
FAN18G1632 Fragaria x ananassa HOM05D000092 ORTHO05D000042 5.4e-08 60.5 56 57.1
RcHm_v2.0_Chr5g0079591 Rosa chinensis HOM05D000092 ORTHO05D000042 7.1e-08 60.1 56 57.1
RcHm_v2.0_Chr3g0473441 Rosa chinensis HOM05D000092 ORTHO05D000042 9.2e-08 59.7 58 56.9
RcHm_v2.0_Chr5g0079811 Rosa chinensis HOM05D000092 ORTHO05D000042 9.2e-08 59.7 57 54.4
FvH4_3g45631 Fragaria vesca HOM05D000092 ORTHO05D000042 1.2e-07 59.3 56 53.6
FvH4_3g45641 Fragaria vesca HOM05D000092 ORTHO05D000042 1.2e-07 59.3 56 53.6
FvH4_3g44680 Fragaria vesca HOM05D000092 ORTHO05D000042 2.1e-07 58.5 56 51.8
FAN11G2559 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.1e-07 58.5 56 51.8
FAN21G0690 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.1e-07 58.5 55 52.7
FAN16G1025 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.7e-07 58.2 55 49.1
FAN21G2001 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.7e-07 58.2 56 53.6
FvH4_3g35820 Fragaria vesca HOM05D000092 ORTHO05D000042 3.5e-07 57.8 56 53.6
FAN25G2124 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.5e-07 57.8 56 53.6
RcHm_v2.0_Chr3g0473481 Rosa chinensis HOM05D000092 ORTHO05D000042 3.5e-07 57.8 58 55.2
RcHm_v2.0_Chr3g0473531 Rosa chinensis HOM05D000092 ORTHO05D000042 3.5e-07 57.8 58 55.2
FvH4_3g44670 Fragaria vesca HOM05D000092 ORTHO05D000042 4.6e-07 57.4 56 51.8
FvH4_3g45680 Fragaria vesca HOM05D000092 ORTHO05D000042 6.0e-07 57.0 56 50.0
FAN16G1657 Fragaria x ananassa HOM05D000092 ORTHO05D000042 6.0e-07 57.0 56 51.8
FvH4_3g43940 Fragaria vesca HOM05D000092 ORTHO05D000042 7.8e-07 56.6 57 52.6
FAN11G0419 Fragaria x ananassa HOM05D000092 ORTHO05D000042 7.8e-07 56.6 58 56.9
FAN16G0155 Fragaria x ananassa HOM05D000092 ORTHO05D000042 7.8e-07 56.6 55 50.9
FAN16G3330 Fragaria x ananassa HOM05D000092 ORTHO05D000042 7.8e-07 56.6 57 47.4
FAN25G1517 Fragaria x ananassa HOM05D000092 ORTHO05D000042 7.8e-07 56.6 55 52.7
RcHm_v2.0_Chr3g0473291 Rosa chinensis HOM05D000092 ORTHO05D000042 7.8e-07 56.6 59 54.2
RcHm_v2.0_Chr5g0059311 Rosa chinensis HOM05D000092 ORTHO05D000042 1.0e-06 56.2 56 53.6
FvH4_3g38670 Fragaria vesca HOM05D000092 ORTHO05D000042 1.3e-06 55.8 55 50.9
FAN11G3538 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.3e-06 55.8 55 54.5
Dinv41192 Davidia involucrata HOM05D000092 ORTHO05D000042 1.7e-06 55.5 55 49.1
FvH4_3g44561 Fragaria vesca HOM05D000092 ORTHO05D000042 1.7e-06 55.5 56 50.0
FAN10G0018 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.7e-06 55.5 58 53.4
RcHm_v2.0_Chr5g0076771 Rosa chinensis HOM05D000092 ORTHO05D000042 1.7e-06 55.5 60 50.0
FAN10G1378 Fragaria x ananassa HOM05D000092 ORTHO05D000042 2.3e-06 55.1 58 53.4
FAN16G2441 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.0e-06 54.7 55 50.9
RcHm_v2.0_Chr5g0061301 Rosa chinensis HOM05D000092 ORTHO05D000042 3.0e-06 54.7 56 50.0
FvH4_3g45643 Fragaria vesca HOM05D000092 ORTHO05D000042 3.9e-06 54.3 59 47.5
FAN11G3161 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.9e-06 54.3 60 50.0
FAN25G3848 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.9e-06 54.3 55 54.5
FvH4_1g17740 Fragaria vesca HOM05D000092 ORTHO05D000042 5.1e-06 53.9 60 51.7
FvH4_3g45730 Fragaria vesca HOM05D000092 ORTHO05D000042 5.1e-06 53.9 56 48.2
FvH4_7g31110 Fragaria vesca HOM05D000092 ORTHO05D000042 5.1e-06 53.9 56 50.0
FAN06G0162 Fragaria x ananassa HOM05D000092 ORTHO05D000042 5.1e-06 53.9 56 50.0
FAN16G0956 Fragaria x ananassa HOM05D000092 ORTHO05D000042 5.1e-06 53.9 58 55.2
FAN19G2889 Fragaria x ananassa HOM05D000092 ORTHO05D000042 5.1e-06 53.9 60 51.7
FAN23G2102 Fragaria x ananassa HOM05D000092 ORTHO05D000042 5.1e-06 53.9 60 51.7
RcHm_v2.0_Chr3g0473561 Rosa chinensis HOM05D000092 ORTHO05D000042 5.1e-06 53.9 58 53.4
RcHm_v2.0_Chr3g0473571 Rosa chinensis HOM05D000092 ORTHO05D000042 5.1e-06 53.9 58 53.4
RcHm_v2.0_Chr5g0080151 Rosa chinensis HOM05D000092 ORTHO05D000042 5.1e-06 53.9 56 51.8
RcHm_v2.0_Chr5g0080261 Rosa chinensis HOM05D000092 ORTHO05D000042 5.1e-06 53.9 56 51.8
RcHm_v2.0_Chr5g0079361 Rosa chinensis HOM05D000092 ORTHO05D000042 8.6e-06 53.1 60 50.0


User provided reference genes

Program Settings