Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G3728 Fragaria x ananassa HOM05D008668 ORTHO05D010653 4.1e-96 354.8 183 100.0
FAN25G1913 Fragaria x ananassa HOM05D008668 ORTHO05D010653 2.1e-92 342.4 183 96.7
FAN16G1191 Fragaria x ananassa HOM05D008668 ORTHO05D010653 2.3e-91 339.0 183 95.6
FAN11G1694 Fragaria x ananassa HOM05D008668 ORTHO05D010653 1.7e-86 322.8 183 92.3
FvH4_3g08820 Fragaria vesca HOM05D008668 ORTHO05D010653 5.0e-86 321.2 183 91.8
Prupe.4G050900 Prunus persica HOM05D008668 ORTHO05D010653 4.9e-49 198.4 179 62.6
QL05p041791 Quercus lobata HOM05D008668 ORTHO05D010653 3.7e-28 129.0 178 44.9
Dinv17338 Davidia involucrata HOM05D008668 ORTHO05D010653 3.4e-26 122.5 173 48.0
Thecc.06G183300 Theobroma cacao HOM05D008668 ORTHO05D010653 2.5e-21 106.3 174 42.5
Dinv40588 Davidia involucrata HOM05D008668 ORTHO05D010653 1.3e-20 104.0 171 45.0
Lj6g0024090 Lotus japonicus HOM05D008668 ORTHO05D010653 1.5e-18 97.1 189 39.7
COL.COLO4_31435 Corchorus olitorius HOM05D008668 ORTHO05D010653 1.0e-17 94.4 175 40.6
Glyma.13G236900 Glycine max HOM05D008668 ORTHO05D010653 1.0e-17 94.4 183 39.3
Lj4g0022764 Lotus japonicus HOM05D008668 ORTHO05D010653 2.2e-17 93.2 181 38.7
Glyma.15G076600 Glycine max HOM05D008668 ORTHO05D010653 8.4e-17 91.3 183 38.3
Manes.17G048000 Manihot esculenta HOM05D008668 ORTHO05D010653 7.1e-16 88.2 175 38.3
Ca_18577_v3 Cicer arietinum L. HOM05D008668 ORTHO05D010653 9.3e-16 87.8 171 37.4
Psat0s1495g0120 Pisum sativum HOM05D008668 ORTHO05D010653 1.2e-15 87.4 171 39.8
Haze_06401 Corylus avellana HOM05D008668 ORTHO05D010653 2.7e-15 86.3 175 37.1
TPR.G16328 Trifolium pratense HOM05D008668 ORTHO05D010653 3.5e-15 85.9 179 35.8
Glyma.13G177100 Glycine max HOM05D008668 ORTHO05D010653 4.6e-15 85.5 166 36.1
Cpa.g.sc373.2 Carica papaya HOM05D008668 ORTHO05D010653 6.0e-15 85.1 180 39.4
Medtr4g088510 Medicago truncatula HOM05D008668 ORTHO05D010653 6.0e-15 85.1 171 37.4
Cfa000511 Carpinus fangiana HOM05D008668 ORTHO05D010653 7.9e-15 84.7 177 37.9
Eucgr.E03256 Eucalyptus grandis HOM05D008668 ORTHO05D010653 7.9e-15 84.7 169 39.1
TPR.G16527 Trifolium pratense HOM05D008668 ORTHO05D010653 1.5e-13 80.5 172 37.2
VMungo0251G3566 Vigna mungo HOM05D008668 ORTHO05D010653 1.5e-13 80.5 182 34.6
Ciclev10017813m.g Citrus clementina HOM05D008668 ORTHO05D010653 1.9e-13 80.1 173 36.4
Glyma.07G199300 Glycine max HOM05D008668 ORTHO05D010653 2.5e-13 79.7 185 35.7
Ca_00351_v3 Cicer arietinum L. HOM05D008668 ORTHO05D010653 2.8e-12 76.3 166 35.5
Gorai.011G029500 Gossypium raimondii HOM05D008668 ORTHO05D010653 4.8e-12 75.5 173 34.1
Gohir.D10G027650 Gossypium hirsutum HOM05D008668 ORTHO05D010653 2.4e-11 73.2 173 33.5
Medtr2g014250 Medicago truncatula HOM05D008668 ORTHO05D010653 4.1e-11 72.4 173 38.2
Gohir.A10G027250 Gossypium hirsutum HOM05D008668 ORTHO05D010653 9.0e-11 71.2 166 35.5
Psat1g203600 Pisum sativum HOM05D008668 ORTHO05D010653 2.6e-10 69.7 172 36.6
Potri.011G056500 Populus trichocarpa HOM05D008668 ORTHO05D010653 5.0e-09 65.5 177 33.9
DCAR_003388 Daucus carota HOM05D008668 ORTHO05D010653 1.1e-08 64.3 164 34.1
Lalb_Chr09g0327791 Lupinus albus HOM05D008668 ORTHO05D010653 5.5e-08 62.0 185 30.8
CSS0028958 Camellia sinensis var. sinensis HOM05D008668 ORTHO05D010653 7.2e-08 61.6 169 33.7
CSS0023827 Camellia sinensis var. sinensis HOM05D008668 ORTHO05D010653 3.6e-07 59.3 169 33.1
Peaxi162Scf00243g00023 Petunia axillaris HOM05D018325 ORTHO05D010653 3.6e-07 59.3 121 37.2
Lalb_Chr16g0383941 Lupinus albus HOM05D008668 ORTHO05D010653 4.6e-07 58.9 175 32.6
Phvul.006G183500 Phaseolus vulgaris HOM05D008668 ORTHO05D010653 4.6e-07 58.9 159 32.7
Actinidia07593 Actinidia chinensis HOM05D008668 ORTHO05D010653 7.9e-07 58.2 173 32.4
Nitab4.5_0002219g0030 Nicotiana tabacum HOM05D018325 ORTHO05D010653 2.3e-06 56.6 112 40.2
Nitab4.5_0008414g0020 Nicotiana tabacum HOM05D018325 ORTHO05D010653 3.0e-06 56.2 116 35.3


User provided reference genes

Program Settings