Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 5.5e-164 580.9 286 100.0
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 5.5e-164 580.9 286 100.0
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 7.4e-161 570.5 286 97.9
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 6.3e-160 567.4 286 97.6
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 5.0e-157 557.8 286 94.8
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 2.6e-145 518.8 286 88.8
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 3.0e-138 495.4 287 81.2
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 3.0e-138 495.4 270 87.0
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 4.0e-138 495.0 287 84.0
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 1.2e-137 493.4 287 82.9
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 1.5e-137 493.0 285 83.5
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 2.6e-137 492.3 285 82.5
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 3.4e-137 491.9 285 82.5
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 8.3e-136 487.3 285 82.5
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 5.4e-135 484.6 287 81.5
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 1.2e-134 483.4 287 80.1
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 1.2e-134 483.4 287 80.5
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 1.6e-134 483.0 287 81.2
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.7e-133 479.6 287 80.8
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 2.9e-133 478.8 284 81.3
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 6.5e-133 477.6 287 80.5
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 8.5e-133 477.2 287 79.1
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 2.5e-132 475.7 287 79.4
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 3.2e-132 475.3 287 78.7
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 9.4e-132 473.8 287 78.7
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 1.6e-131 473.0 287 77.0
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 1.6e-131 473.0 287 77.4
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 3.6e-131 471.9 284 79.6
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 3.6e-131 471.9 287 77.4
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 8.0e-131 470.7 288 78.5
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 8.0e-131 470.7 301 76.1
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 8.0e-131 470.7 286 78.3
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 1.0e-130 470.3 286 78.7
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 1.8e-130 469.5 284 78.5
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.8e-130 469.5 284 79.2
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 3.0e-130 468.8 287 77.0
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 4.0e-130 468.4 284 79.2
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 6.8e-130 467.6 272 83.1
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 6.8e-130 467.6 284 78.5
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 8.8e-130 467.2 287 76.7
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 1.2e-129 466.8 284 78.9
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 1.2e-129 466.8 291 76.3
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 2.0e-129 466.1 283 77.7
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 4.4e-129 464.9 284 76.8
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 9.8e-129 463.8 283 77.4
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 9.8e-129 463.8 283 77.0
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 1.3e-128 463.4 309 73.1
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 1.7e-128 463.0 283 77.4
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 2.2e-128 462.6 283 77.4
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 3.7e-128 461.8 283 75.6
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 6.3e-128 461.1 284 78.5
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 6.3e-128 461.1 283 78.4
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 6.3e-128 461.1 285 77.2
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 6.3e-128 461.1 285 77.5
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 1.8e-127 459.5 283 77.4
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 3.1e-127 458.8 285 77.9
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 4.1e-127 458.4 287 75.3
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 4.1e-127 458.4 288 74.3
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 9.2e-127 457.2 283 77.7
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 1.6e-126 456.4 287 77.4
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 3.5e-126 455.3 285 76.8
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 3.5e-126 455.3 285 77.9
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 4.5e-126 454.9 288 74.0
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 4.5e-126 454.9 284 75.4
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 5.9e-126 454.5 284 76.4
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.3e-125 452.6 285 76.8
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 5.0e-125 451.4 287 72.5
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 7.3e-124 447.6 277 74.7
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 2.8e-123 445.7 287 71.1
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 8.0e-123 444.1 285 73.7
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 1.8e-122 443.0 287 73.5
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 6.8e-122 441.0 287 71.1
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 4.4e-121 438.3 286 72.7
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 9.8e-121 437.2 282 74.5
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 2.9e-120 435.6 287 70.4
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 8.3e-120 434.1 269 77.3
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 3.2e-119 432.2 269 77.0
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 3.2e-119 432.2 269 77.0
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.2e-118 430.3 286 69.2
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 2.7e-118 429.1 327 65.1
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 2.7e-118 429.1 287 71.1
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 4.6e-118 428.3 286 69.2
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 1.1e-116 423.7 282 72.0
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 1.1e-116 423.7 290 70.7
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 8.9e-114 414.1 286 68.9
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 1.7e-112 409.8 277 69.3
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 1.1e-111 407.1 285 67.0
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 1.1e-111 407.1 269 70.3
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 1.9e-111 406.4 248 79.0
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 1.6e-110 403.3 268 70.1
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 5.6e-108 394.8 283 67.5
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 5.6e-108 394.8 281 68.7
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 1.6e-107 393.3 261 72.0
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 3.6e-107 392.1 262 69.8
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 1.3e-104 383.6 248 72.2
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 1.3e-104 383.6 285 65.6
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 3.5e-102 375.6 239 77.0
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.2e-97 360.5 213 80.3
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 1.4e-87 327.0 261 58.6
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 3.6e-75 285.8 175 77.7
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 5.8e-73 278.5 259 49.0
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 1.4e-71 273.9 260 50.4
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 8.7e-69 264.6 260 49.2
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.1e-68 264.2 252 51.2
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 3.3e-52 209.5 150 70.0
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 5.3e-50 202.2 162 68.5
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 1.2e-49 201.1 253 41.5
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.7e-48 197.2 110 86.4
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 4.4e-44 182.6 105 80.0
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 4.8e-43 179.1 305 42.6
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.3e-40 171.0 193 48.2
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 3.5e-33 146.4 94 70.2
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 1.7e-32 144.1 88 75.0
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.2e-30 137.9 95 70.5
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.2e-30 137.9 77 83.1
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 4.0e-21 106.3 69 75.4
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 5.2e-21 105.9 72 72.2
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 5.9e-09 65.9 41 68.3
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 8.0e-06 55.5 48 56.2


User provided reference genes

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