Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G3337 Fragaria x ananassa HOM05D005685 ORTHO05D007046 0.0e+00 1512.7 751 100.0
FAN25G1369 Fragaria x ananassa HOM05D005685 ORTHO05D007046 0.0e+00 1331.6 760 89.3
FvH4_3g17370 Fragaria vesca HOM05D005685 ORTHO05D007046 0.0e+00 1260.4 703 90.8
FAN16G1001 Fragaria x ananassa HOM05D005685 ORTHO05D007046 0.0e+00 1240.7 739 86.7
FAN11G3672 Fragaria x ananassa HOM05D005685 ORTHO05D007046 3.2e-256 888.6 521 88.7
Prupe.4G154100 Prunus persica HOM05D005685 ORTHO05D007046 2.2e-252 875.9 697 66.0
MD11G1273300 Malus domestica HOM05D005685 ORTHO05D007046 1.4e-246 856.7 721 62.8
Haze_08449 Corylus avellana HOM05D005685 ORTHO05D007046 8.3e-220 767.7 731 56.2
CANSAT56G0504 Cannabis sativa HOM05D005685 ORTHO05D007046 7.3e-216 754.6 718 56.8
CiPaw.11G154400 Carya illinoinensis HOM05D005685 ORTHO05D007046 2.4e-211 739.6 719 55.2
Dinv13349 Davidia involucrata HOM05D005685 ORTHO05D007046 5.1e-209 731.9 724 54.7
CSS0007667 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 7.6e-205 718.0 735 53.2
Gohir.D11G302400 Gossypium hirsutum HOM05D005685 ORTHO05D007046 1.7e-201 706.8 713 53.2
Gohir.A11G290000 Gossypium hirsutum HOM05D005685 ORTHO05D007046 2.3e-201 706.4 716 53.6
Manes.03G084500 Manihot esculenta HOM05D005685 ORTHO05D007046 2.3e-201 706.4 716 53.1
Hma1.2p1_0713F.1_g207810 Hydrangea macrophylla HOM05D005685 ORTHO05D007046 3.9e-201 705.7 723 52.8
Gorai.007G332400 Gossypium raimondii HOM05D005685 ORTHO05D007046 1.9e-200 703.4 713 53.2
Cpa.g.sc77.65 Carica papaya HOM05D005685 ORTHO05D007046 3.1e-198 696.0 708 52.0
Phvul.011G173500 Phaseolus vulgaris HOM05D005685 ORTHO05D007046 3.4e-197 692.6 721 51.5
Ciclev10019120m.g Citrus clementina HOM05D005685 ORTHO05D007046 7.6e-197 691.4 729 51.3
Actinidia12613 Actinidia chinensis HOM05D005685 ORTHO05D007046 2.2e-196 689.9 732 51.5
Atru.chr2.1911 Acer truncatum HOM05D005685 ORTHO05D007046 1.1e-195 687.6 727 50.9
CsaV3_4G032730 Cucumis sativus L. HOM05D005685 ORTHO05D007046 4.2e-195 685.6 732 50.3
TAR605G0002 Trochodendron aralioides HOM05D005685 ORTHO05D007046 5.4e-195 685.3 742 50.7
Potri.001G380900 Populus trichocarpa HOM05D005685 ORTHO05D007046 9.3e-195 684.5 720 52.1
ClCG11G017070 Citrullus lanatus HOM05D005685 ORTHO05D007046 2.3e-193 679.9 733 50.3
Lalb_Chr19g0133681 Lupinus albus HOM05D005685 ORTHO05D007046 5.1e-193 678.7 722 51.0
Potri.011G102100 Populus trichocarpa HOM05D005685 ORTHO05D007046 8.7e-193 677.9 727 52.7
VMungo1127G1789 Vigna mungo HOM05D005685 ORTHO05D007046 2.5e-192 676.4 720 50.7
Sed0016294 Sechium edule HOM05D005685 ORTHO05D007046 3.3e-192 676.0 737 50.1
Lj1g0015970 Lotus japonicus HOM05D005685 ORTHO05D007046 1.3e-191 674.1 711 50.5
Nn1g00647 Nelumbo nucifera HOM05D005685 ORTHO05D007046 6.2e-191 671.8 737 49.1
Sabra16G0251100 Salix brachista HOM05D005685 ORTHO05D007046 1.4e-190 670.6 745 50.7
GSVIVG01014072001 Vitis vinifera HOM05D005685 ORTHO05D007046 9.0e-190 667.9 700 51.4
Thecc.07G137700 Theobroma cacao HOM05D005685 ORTHO05D007046 1.3e-188 664.1 632 55.5
Psat4g139160 Pisum sativum HOM05D005685 ORTHO05D007046 2.4e-187 659.8 738 48.9
Sabra11G0083400 Salix brachista HOM05D005685 ORTHO05D007046 4.2e-187 659.1 722 51.0
Medtr8g461480 Medicago truncatula HOM05D005685 ORTHO05D007046 3.5e-186 656.0 726 49.0
RhsimUnG0165000 Rhododendron simsii HOM05D005685 ORTHO05D007046 4.3e-184 649.0 673 52.6
MELO3C016678.2 Cucumis melo HOM05D005685 ORTHO05D007046 9.6e-184 647.9 796 46.1
PSO063G4015 Papaver somniferum HOM05D005685 ORTHO05D007046 1.3e-183 647.5 723 47.7
RhsimUnG0224400 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.2e-181 641.0 769 48.4
PSO782G3742 Papaver somniferum HOM05D005685 ORTHO05D007046 1.7e-180 637.1 723 47.3
MSTRG.14992 Avicennia marina HOM05D005685 ORTHO05D007046 1.0e-177 627.9 731 48.6
Duzib213G0171 Durio zibethinus HOM05D005685 ORTHO05D007046 1.5e-176 624.0 713 48.5
Cfa019501 Carpinus fangiana HOM05D005685 ORTHO05D007046 1.6e-175 620.5 572 57.2
Cc05_g10550 Coffea canephora HOM05D005685 ORTHO05D007046 2.1e-175 620.2 717 48.3
RhsimUnG0060100 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.5e-173 614.0 674 50.7
THA.LOC104808083 Tarenaya hassleriana HOM05D005685 ORTHO05D007046 7.6e-173 611.7 706 47.9
DCAR_017584 Daucus carota HOM05D005685 ORTHO05D007046 2.9e-172 609.8 735 47.2
TPR.G16474 Trifolium pratense HOM05D005685 ORTHO05D007046 2.9e-172 609.8 698 49.0
PGR031G3876 Punica granatum HOM05D005685 ORTHO05D007046 9.3e-171 604.7 731 45.6
Sc03g0010780 Simmondsia chinensis HOM05D005685 ORTHO05D007046 6.0e-170 602.1 718 46.1
Aqoxy4G01266 Aquilegia oxysepala HOM05D005685 ORTHO05D007046 3.9e-169 599.4 730 44.9
Thhalv10006979m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 5.1e-169 599.0 717 47.0
Sp1g15160 Schrenkiella parvula HOM05D005685 ORTHO05D007046 5.1e-169 599.0 708 47.5
SalBow8G2073 Salvia bowleyana HOM05D005685 ORTHO05D007046 4.3e-168 595.9 752 45.5
Peaxi162Scf00111g01236 Petunia axillaris HOM05D005685 ORTHO05D007046 5.7e-168 595.5 720 46.1
HanXRQChr10g0305611 Helianthus annuus HOM05D005685 ORTHO05D007046 1.1e-166 591.3 728 45.9
Thhalv10018251m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 3.1e-166 589.7 704 47.0
Solyc07g062050.3 Solanum lycopersicum HOM05D005685 ORTHO05D007046 6.9e-166 588.6 720 46.1
CAN.G375.61 Capsicum annuum HOM05D005685 ORTHO05D007046 1.5e-165 587.4 713 46.3
Sopen07g030310 Solanum pennellii HOM05D005685 ORTHO05D007046 2.0e-165 587.0 720 46.1
C05p15360 Brassica napus HOM05D005685 ORTHO05D007046 2.6e-165 586.6 705 46.7
BraA06t24453Z Brassica rapa HOM05D005685 ORTHO05D007046 1.0e-164 584.7 706 46.5
Lsat_1_v5_gn_5_126281 Lactuca sativa HOM05D005685 ORTHO05D007046 1.3e-164 584.3 729 44.7
A06p12940 Brassica napus HOM05D005685 ORTHO05D007046 1.7e-164 583.9 704 46.6
COL.COLO4_17454 Corchorus olitorius HOM05D005685 ORTHO05D007046 2.2e-164 583.6 719 46.7
CARHR017570 Cardamine hirsuta HOM05D005685 ORTHO05D007046 2.1e-162 577.0 730 45.5
vmacro11986 Vaccinium macrocarpon HOM05D005685 ORTHO05D007046 7.9e-162 575.1 739 46.3
BolC5t30242H Brassica oleracea HOM05D005685 ORTHO05D007046 1.5e-160 570.9 732 44.8
Sp5g33630 Schrenkiella parvula HOM05D005685 ORTHO05D007046 9.7e-160 568.2 709 44.9
Aa31LG4G2430 Aethionema arabicum HOM05D005685 ORTHO05D007046 2.2e-159 567.0 697 45.8
Ca_12745_v3 Cicer arietinum L. HOM05D005685 ORTHO05D007046 4.8e-159 565.8 680 46.8
SGA_v2.0_scaffold73G24373 Striga asiatica HOM05D005685 ORTHO05D007046 1.4e-158 564.3 742 44.2
EL10Ac4g08448 Beta vulgaris HOM05D005685 ORTHO05D007046 3.1e-158 563.1 718 43.2
AT1G78540 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 7.7e-157 558.5 710 44.5
Carub.0001s1676 Capsella rubella HOM05D005685 ORTHO05D007046 1.3e-156 557.8 711 45.0
Migut.M00685 Erythranthe guttata HOM05D005685 ORTHO05D007046 5.5e-155 552.4 727 43.2
AL7G51000 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 6.1e-154 548.9 715 44.3
AT1G17040 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 1.8e-153 547.4 698 44.8
CARHR072030 Cardamine hirsuta HOM05D005685 ORTHO05D007046 3.0e-153 546.6 715 43.8
Aa31LG7G1870 Aethionema arabicum HOM05D005685 ORTHO05D007046 1.5e-152 544.3 721 43.8
Carub.0002s2539 Capsella rubella HOM05D005685 ORTHO05D007046 1.7e-151 540.8 707 44.1
AL2G38940 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 6.5e-148 528.9 639 46.0
PGSC0003DMG400007083 Solanum tuberosum HOM05D005685 ORTHO05D007046 2.7e-146 523.5 757 41.5
Lj1C822G13 Lonicera japonica HOM05D005685 ORTHO05D007046 4.7e-146 522.7 676 46.0
Ah.03g134490 Amaranthus hybridus HOM05D005685 ORTHO05D007046 2.6e-144 516.9 719 41.0
ECA234G1223 Erigeron canadensis HOM05D005685 ORTHO05D007046 7.0e-142 508.8 695 42.6
AUR62013935 Chenopodium quinoa HOM05D005685 ORTHO05D007046 1.9e-139 500.7 694 40.1
AL1G29220 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 1.6e-138 497.7 625 45.4
AUR62019678 Chenopodium quinoa HOM05D005685 ORTHO05D007046 8.8e-137 491.9 726 39.4
ATR0665G442 Amborella trichopoda HOM05D005685 ORTHO05D007046 5.7e-136 489.2 742 39.6
Nitab4.5_0001140g0120 Nicotiana tabacum HOM05D005685 ORTHO05D007046 4.8e-135 486.1 744 41.1
BcaC05g25679 Brassica carinata HOM05D005685 ORTHO05D007046 1.3e-132 478.0 552 48.4
unitig_747.g21593 Utricularia gibba HOM05D005685 ORTHO05D007046 7.2e-131 472.2 715 41.4
RcHm_v2.0_Chr5g0028891 Rosa chinensis HOM05D005685 ORTHO05D007046 8.8e-129 465.3 257 88.7
Zm00001eb004590 Zea mays HOM05D005685 ORTHO05D007046 1.6e-125 454.5 713 38.6
Glyma.15G211900 Glycine max HOM05D005685 ORTHO05D007046 1.5e-123 448.0 553 47.6
BcaB02g06680 Brassica carinata HOM05D005685 ORTHO05D007046 1.0e-121 441.8 526 47.7
arahy.Tifrunner.gnm1.ann1.4M0U4E Arachis hypogaea HOM05D005685 ORTHO05D007046 1.7e-116 424.5 548 47.3
arahy.Tifrunner.gnm1.ann1.TIF1LK Arachis hypogaea HOM05D005685 ORTHO05D007046 1.1e-115 421.8 547 47.2
Pp3c20_21160 Physcomitrium patens HOM05D005685 ORTHO05D007046 2.5e-115 420.6 782 34.5
AagrBONN_evm.TU.Sc2ySwM_228.1006 Anthoceros agrestis HOM05D005685 ORTHO05D007046 1.0e-113 415.2 782 34.3
SMO351G0414 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 2.9e-111 407.1 705 37.4
SEGI_25985 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 1.7e-108 397.9 660 35.8
Mapoly0011s0171 Marchantia polymorpha HOM05D005685 ORTHO05D007046 4.9e-103 379.8 787 34.9
CSS0011531 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 1.6e-98 364.8 431 47.8
DCAR_013783 Daucus carota HOM05D005685 ORTHO05D007046 8.1e-98 362.5 706 34.3
HPP92_014870 Vanilla planifolia HOM05D005685 ORTHO05D007046 8.1e-98 362.5 672 36.0
Eucgr.F03221 Eucalyptus grandis HOM05D005685 ORTHO05D007046 4.0e-97 360.1 366 52.2
RhsimUnG0062900 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.3e-92 345.1 492 43.5
TWI38G0887 Tripterygium wilfordii HOM05D005685 ORTHO05D007046 6.2e-90 336.3 236 66.9
Nitab4.5_0003618g0060 Nicotiana tabacum HOM05D005685 ORTHO05D007046 4.0e-89 333.6 579 37.5
BraA06t26874Z Brassica rapa HOM05D005685 ORTHO05D007046 1.0e-84 318.9 302 55.0
Glyma.15G212100 Glycine max HOM05D005685 ORTHO05D007046 2.3e-68 264.6 181 64.6
Os10g0567300 Oryza sativa ssp. japonica HOM05D005685 ORTHO05D007046 5.3e-65 253.4 280 46.8
CDE04G2909 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 1.6e-61 241.9 358 39.9
Eucgr.F03222 Eucalyptus grandis HOM05D005685 ORTHO05D007046 4.3e-59 233.8 331 43.8
CSS0047371 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 5.9e-48 196.8 115 77.4
CDE04G0489 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 1.2e-45 189.1 269 40.5
MBI19_g17443_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 3.3e-27 127.9 108 60.2
Zm00001eb210210 Zea mays HOM05D005685 ORTHO05D007046 3.2e-22 111.3 153 42.5
SEGI_34067 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 1.5e-19 102.4 129 41.9
Pp3c7_2410 Physcomitrium patens HOM05D005685 ORTHO05D007046 1.6e-16 92.4 183 35.5
CSS0003149 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 4.5e-16 90.9 83 56.6
Mapoly0028s0082 Marchantia polymorpha HOM05D005685 ORTHO05D007046 5.9e-16 90.5 169 35.5
SMO145G0004 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 1.3e-15 89.4 189 34.9
CBR_g19551 Chara braunii HOM05D005685 ORTHO05D007046 1.5e-14 85.9 164 35.4
RcHm_v2.0_Chr5g0028901 Rosa chinensis HOM05D005685 ORTHO05D007046 2.0e-11 75.5 48 70.8
MBI19_g17438_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 2.4e-09 68.6 57 59.6
CBR_g28498 Chara braunii HOM05D005685 ORTHO05D007046 5.9e-08 63.9 105 37.1
A08p10430 Brassica napus HOM05D005685 ORTHO05D007046 9.5e-06 56.6 121 33.1


User provided reference genes

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