Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G3314 Fragaria x ananassa HOM05D005664 ORTHO05D006509 0.0e+00 1352.0 711 100.0
FAN16G2562 Fragaria x ananassa HOM05D005664 ORTHO05D006509 0.0e+00 1288.1 706 96.9
FvH4_3g41520 Fragaria vesca HOM05D005664 ORTHO05D006509 0.0e+00 1287.7 706 97.0
FAN25G3031 Fragaria x ananassa HOM05D005664 ORTHO05D006509 0.0e+00 1281.5 706 96.3
FAN11G0133 Fragaria x ananassa HOM05D005664 ORTHO05D006509 0.0e+00 1271.1 708 96.2
RcHm_v2.0_Chr5g0074471 Rosa chinensis HOM05D005664 ORTHO05D006509 5.3e-309 1063.9 722 84.3
Prupe.6G035900 Prunus persica HOM05D005664 ORTHO05D006509 3.8e-206 722.2 755 60.0
MD11G1047100 Malus domestica HOM05D005664 ORTHO05D006509 3.2e-205 719.2 754 59.5
MD03G1043600 Malus domestica HOM05D005664 ORTHO05D006509 1.3e-201 707.2 751 59.3
QL08p000429 Quercus lobata HOM05D005664 ORTHO05D006509 1.2e-151 541.2 755 49.9
Haze_09920 Corylus avellana HOM05D005664 ORTHO05D006509 1.6e-140 504.2 770 46.2
Dinv40921 Davidia involucrata HOM05D005664 ORTHO05D006509 6.8e-139 498.8 751 44.7
Cfa016966 Carpinus fangiana HOM05D005664 ORTHO05D006509 8.3e-137 491.9 750 46.8
Potri.001G472600 Populus trichocarpa HOM05D005664 ORTHO05D006509 3.9e-126 456.4 740 43.6
Atru.chr2.3903 Acer truncatum HOM05D005664 ORTHO05D006509 1.2e-124 451.4 735 44.4
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 1.2e-124 451.4 727 43.7
CSS0015837 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 6.2e-124 449.1 759 42.3
Ciclev10007600m.g Citrus clementina HOM05D005664 ORTHO05D006509 1.4e-123 448.0 745 45.0
Manes.01G007400 Manihot esculenta HOM05D005664 ORTHO05D006509 2.1e-119 434.1 738 44.9
Sabra16G0320800 Salix brachista HOM05D005664 ORTHO05D006509 1.0e-118 431.8 740 43.4
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 1.9e-117 427.6 754 40.8
Potri.011G169200 Populus trichocarpa HOM05D005664 ORTHO05D006509 5.6e-117 426.0 741 42.8
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 2.8e-116 423.7 744 42.9
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 1.3e-113 414.8 754 41.6
CiPaw.12G143100 Carya illinoinensis HOM05D005664 ORTHO05D006509 1.7e-113 414.5 750 42.7
Manes.01G007300 Manihot esculenta HOM05D005664 ORTHO05D006509 1.9e-112 411.0 741 43.2
Sabra11G0137600 Salix brachista HOM05D005664 ORTHO05D006509 9.3e-112 408.7 749 41.5
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 6.0e-111 406.0 803 39.2
Rhsim06G0235600 Rhododendron simsii HOM05D005664 ORTHO05D006509 6.6e-110 402.5 756 40.3
Thecc.07G000900 Theobroma cacao HOM05D005664 ORTHO05D006509 1.1e-109 401.7 766 41.3
Actinidia30345 Actinidia chinensis HOM05D005664 ORTHO05D006509 5.6e-109 399.4 752 39.6
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 5.6e-109 399.4 746 42.1
Duzib268G0032 Durio zibethinus HOM05D005664 ORTHO05D006509 8.1e-108 395.6 765 41.2
Duzib170G1037 Durio zibethinus HOM05D005664 ORTHO05D006509 3.4e-106 390.2 769 41.1
TWI39G0285 Tripterygium wilfordii HOM05D005664 ORTHO05D006509 4.5e-106 389.8 768 38.9
Eucgr.F01983 Eucalyptus grandis HOM05D005664 ORTHO05D006509 4.9e-105 386.3 774 40.4
Cpa.g.sc12.60 Carica papaya HOM05D005664 ORTHO05D006509 3.0e-102 377.1 816 39.5
ClCG09G021770 Citrullus lanatus HOM05D005664 ORTHO05D006509 2.5e-101 374.0 763 38.4
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 3.3e-101 373.6 879 34.5
COL.COLO4_30921 Corchorus olitorius HOM05D005664 ORTHO05D006509 1.3e-100 371.7 751 39.7
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 6.2e-100 369.4 745 40.0
MELO3C013227.2 Cucumis melo HOM05D005664 ORTHO05D006509 8.1e-100 369.0 763 38.7
CsaV3_7G021290 Cucumis sativus L. HOM05D005664 ORTHO05D006509 4.0e-99 366.7 759 38.2
Gohir.A13G128200 Gossypium hirsutum HOM05D005664 ORTHO05D006509 1.0e-97 362.1 769 40.3
Gorai.013G147600 Gossypium raimondii HOM05D005664 ORTHO05D006509 2.9e-97 360.5 769 40.1
Gohir.D13G131600 Gossypium hirsutum HOM05D005664 ORTHO05D006509 3.2e-96 357.1 769 39.8
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 5.5e-96 356.3 912 34.0
Sed0014853 Sechium edule HOM05D005664 ORTHO05D006509 3.3e-93 347.1 756 37.8
Oeu015275.1 Olea europaea HOM05D005664 ORTHO05D006509 3.6e-87 327.0 748 37.4
Sed0021044 Sechium edule HOM05D005664 ORTHO05D006509 1.0e-86 325.5 740 36.8
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 3.3e-85 320.5 745 36.4
SalBow8G4453 Salvia bowleyana HOM05D005664 ORTHO05D006509 5.7e-85 319.7 734 36.1
Nitab4.5_0000611g0180 Nicotiana tabacum HOM05D005664 ORTHO05D006509 7.4e-85 319.3 743 37.3
DCAR_016806 Daucus carota HOM05D005664 ORTHO05D006509 4.5e-82 310.1 754 35.8
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea HOM05D005664 ORTHO05D006509 1.7e-81 308.1 674 37.4
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea HOM05D005664 ORTHO05D006509 6.5e-81 306.2 674 37.1
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 2.5e-80 304.3 746 36.1
MSTRG.16129 Avicennia marina HOM05D005664 ORTHO05D006509 4.2e-80 303.5 761 35.1
Lj3g0022247 Lotus japonicus HOM05D005664 ORTHO05D006509 9.4e-80 302.4 703 35.6
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 2.1e-79 301.2 757 35.8
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 2.7e-79 300.8 673 36.7
Glyma.06G321000 Glycine max HOM05D005664 ORTHO05D006509 1.8e-78 298.1 670 36.7
Aqoxy1G04294 Aquilegia oxysepala HOM05D005664 ORTHO05D006509 8.8e-78 295.8 750 34.8
Nitab4.5_0001622g0140 Nicotiana tabacum HOM05D005664 ORTHO05D006509 2.6e-77 294.3 731 35.4
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 2.2e-76 291.2 739 35.6
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 2.8e-76 290.8 750 36.0
PGSC0003DMG400011270 Solanum tuberosum HOM05D005664 ORTHO05D006509 6.3e-76 289.7 747 35.9
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 1.4e-75 288.5 743 34.7
VMungo1080G0452 Vigna mungo HOM05D005664 ORTHO05D006509 1.8e-75 288.1 683 37.3
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 3.1e-75 287.3 757 35.3
THA.LOC104813471 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 3.1e-75 287.3 769 35.1
Phvul.005G005100 Phaseolus vulgaris HOM05D005664 ORTHO05D006509 2.0e-74 284.6 681 35.8
Peaxi162Scf00006g00092 Petunia axillaris HOM05D005664 ORTHO05D006509 7.7e-74 282.7 754 35.7
Glyma.04G114300 Glycine max HOM05D005664 ORTHO05D006509 1.3e-73 282.0 666 37.1
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 1.7e-73 281.6 751 34.5
Lalb_Chr18g0048701 Lupinus albus HOM05D005664 ORTHO05D006509 3.8e-73 280.4 710 36.6
Solyc10g005700.3 Solanum lycopersicum HOM05D005664 ORTHO05D006509 6.5e-73 279.6 749 35.6
THA.LOC104813465 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 8.5e-73 279.3 768 34.6
TPR.G16700 Trifolium pratense HOM05D005664 ORTHO05D006509 1.2e-71 275.4 724 34.7
Sopen10g001670 Solanum pennellii HOM05D005664 ORTHO05D006509 6.1e-71 273.1 748 35.3
CANSAT11G1251 Cannabis sativa HOM05D005664 ORTHO05D006509 3.3e-69 267.3 737 35.3
PSO063G4895 Papaver somniferum HOM05D005664 ORTHO05D006509 6.3e-68 263.1 746 31.4
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 2.4e-67 261.2 749 33.9
Ca_14130_v3 Cicer arietinum L. HOM05D005664 ORTHO05D006509 4.1e-67 260.4 697 34.4
Oeu062669.1 Olea europaea HOM05D005664 ORTHO05D006509 4.1e-67 260.4 745 32.3
PSO782G2174 Papaver somniferum HOM05D005664 ORTHO05D006509 1.6e-66 258.5 746 31.5
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 2.0e-66 258.1 720 34.3
Aa31LG5G11790 Aethionema arabicum HOM05D005664 ORTHO05D006509 1.7e-65 255.0 773 35.4
Psat5g231360 Pisum sativum HOM05D005664 ORTHO05D006509 3.6e-63 247.3 737 33.5
unitig_37.g12212 Utricularia gibba HOM05D005664 ORTHO05D006509 4.0e-62 243.8 745 32.9
Lalb_Chr15g0079911 Lupinus albus HOM05D005664 ORTHO05D006509 1.7e-60 238.4 656 35.1
Medtr3g009540 Medicago truncatula HOM05D005664 ORTHO05D006509 2.8e-60 237.7 717 33.5
AT4G26450 Arabidopsis thaliana HOM05D005664 ORTHO05D006509 3.1e-59 234.2 775 33.7
AL7G26500 Arabidopsis lyrata HOM05D005664 ORTHO05D006509 5.3e-59 233.4 783 33.0
Carub.0007s1448 Capsella rubella HOM05D005664 ORTHO05D006509 9.1e-59 232.6 771 33.6
Sp7g24360 Schrenkiella parvula HOM05D005664 ORTHO05D006509 1.7e-57 228.4 780 32.7
A03p56710 Brassica napus HOM05D005664 ORTHO05D006509 3.8e-57 227.3 770 32.6
BraA03t14741Z Brassica rapa HOM05D005664 ORTHO05D006509 3.8e-57 227.3 770 32.6
Hund01929 Selenicereus undatus HOM05D005664 ORTHO05D006509 5.5e-56 223.4 662 31.1
Hund01927 Selenicereus undatus HOM05D005664 ORTHO05D006509 1.0e-54 219.2 648 32.1
Thhalv10024531m.g Eutrema salsugineum HOM05D005664 ORTHO05D006509 4.0e-54 217.2 776 32.3
C07p54910 Brassica napus HOM05D005664 ORTHO05D006509 5.2e-54 216.9 764 33.4
BolC7t45979H Brassica oleracea HOM05D005664 ORTHO05D006509 5.2e-54 216.9 764 33.4
AUR62015929 Chenopodium quinoa HOM05D005664 ORTHO05D006509 3.4e-53 214.2 693 32.2
CARHR234010 Cardamine hirsuta HOM05D005664 ORTHO05D006509 9.8e-53 212.6 791 32.9
AUR62040680 Chenopodium quinoa HOM05D005664 ORTHO05D006509 2.4e-51 208.0 690 31.3
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 1.2e-50 205.7 725 31.2
BcaC06g32747 Brassica carinata HOM05D005664 ORTHO05D006509 1.3e-49 202.2 780 32.8
HanXRQChr17g0546881 Helianthus annuus HOM05D005664 ORTHO05D006509 2.2e-49 201.4 729 31.4
EL10Ac4g07635 Beta vulgaris HOM05D005664 ORTHO05D006509 6.5e-49 199.9 666 32.4
Ah.04g166380 Amaranthus hybridus HOM05D005664 ORTHO05D006509 4.2e-48 197.2 673 30.8
C01p22360 Brassica napus HOM05D005664 ORTHO05D006509 4.7e-47 193.7 766 31.7
BcaC09g50709 Brassica carinata HOM05D005664 ORTHO05D006509 2.3e-46 191.4 766 32.0
BolC1t02167H Brassica oleracea HOM05D005664 ORTHO05D006509 3.4e-45 187.6 766 32.1
Sc03g0011800 Simmondsia chinensis HOM05D005664 ORTHO05D006509 5.4e-43 180.3 730 31.0
A01p17690 Brassica napus HOM05D005664 ORTHO05D006509 2.0e-42 178.3 768 31.1
BraA01t01725Z Brassica rapa HOM05D005664 ORTHO05D006509 3.5e-42 177.6 768 31.1
ECA236G2587 Erigeron canadensis HOM05D005664 ORTHO05D006509 4.5e-42 177.2 714 32.4
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 4.3e-40 170.6 156 57.1
Ah.06g181030 Amaranthus hybridus HOM05D000037 ORTHO05D006509 1.0e-38 166.0 712 29.1
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 8.9e-38 162.9 773 27.7
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 6.4e-36 156.8 750 26.4
Lj1A901T36 Lonicera japonica HOM05D005664 ORTHO05D006509 2.5e-32 144.8 283 44.5
Lj1A901G38 Lonicera japonica HOM05D005664 ORTHO05D006509 1.8e-30 138.7 129 54.3
MSTRG.13052 Avicennia marina HOM05D005664 ORTHO05D006509 7.0e-27 126.7 573 27.6
Migut.H01706 Erythranthe guttata HOM05D005664 ORTHO05D006509 1.2e-26 125.9 727 28.7
unitig_46.g18526 Utricularia gibba HOM05D005664 ORTHO05D006509 1.3e-25 122.5 669 27.5
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 9.5e-24 116.3 666 28.1
ATR0021G035 Amborella trichopoda HOM05D005664 ORTHO05D006509 3.6e-23 114.4 842 24.9
MSTRG.7045 Avicennia marina HOM05D005664 ORTHO05D006509 5.8e-13 80.5 116 44.8
Zm00001eb082760 Zea mays HOM05D019841 ORTHO05D006509 1.7e-09 68.9 744 22.4
SEGI_32826 Sequoiadendron giganteum HOM05D005664 ORTHO05D006509 8.6e-09 66.6 121 37.2
Zm00001eb422560 Zea mays HOM05D019841 ORTHO05D006509 4.3e-08 64.3 716 23.0
HPP92_028056 Vanilla planifolia HOM05D005664 ORTHO05D006509 4.0e-06 57.8 187 37.4
AUR62017309 Chenopodium quinoa HOM05D005664 ORTHO05D006509 9.0e-06 56.6 96 36.5


User provided reference genes

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