Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G3206 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-144 515.4 266 100.0
FAN21G3097 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-101 372.9 206 93.7
FvH4_3g21760 Fragaria vesca HOM05D002813 ORTHO05D003203 6.0e-80 301.6 171 92.4
FAN11G3977 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-78 297.4 171 91.2
FAN16G2005 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.6e-62 241.9 168 76.2
RcHm_v2.0_Chr6g0306251 Rosa chinensis HOM05D002813 ORTHO05D003203 1.5e-35 154.1 171 56.1
FAN05G4830 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.3e-30 136.3 188 48.4
FvH4_6g11570 Fragaria vesca HOM05D002813 ORTHO05D003203 4.3e-30 136.0 182 48.9
FAN14G2467 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.7e-30 135.6 182 48.9
FAN14G4978 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.8e-29 132.5 191 48.2
FvH4_6g07350 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-28 131.3 158 50.6
FvH4_6g06400 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-28 131.0 194 47.4
FAN14G1246 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-27 127.9 277 39.0
FAN25G1209 Fragaria x ananassa HOM05D028616 ORTHO05D200482 1.3e-26 124.4 72 95.8
FAN18G2037 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-25 120.9 143 54.5
FAN25G3517 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.1e-24 115.5 95 69.5
FvH4_5g19260 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-23 114.4 127 53.5
FAN25G3603 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.1e-23 112.5 57 98.2
FAN14G4337 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-22 111.3 150 47.3
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 2.2e-21 107.1 175 42.3
FvH4_6g10172 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-20 104.0 165 43.0
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 1.0e-18 98.2 175 41.1
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 1.9e-17 94.0 148 40.5
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 7.2e-17 92.0 175 37.1
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 2.7e-16 90.1 173 37.0
FAN16G0536 Fragaria x ananassa HOM05D028616 ORTHO05D205846 4.7e-16 89.4 48 93.8
FAN02G4625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-15 87.8 87 57.5
Gohir.A05G046700 Gossypium hirsutum HOM05D002813 ORTHO05D003203 2.3e-15 87.0 174 38.5
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 2.3e-15 87.0 149 38.3
FAN02G0224 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.7e-15 85.5 93 53.8
FAN09G1205 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.8e-15 85.1 75 61.3
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 4.4e-14 82.8 164 36.0
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 1.3e-13 81.3 174 36.2
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 2.2e-13 80.5 174 35.6
Manes.16G075500 Manihot esculenta HOM05D002813 ORTHO05D003203 2.2e-13 80.5 148 32.4
FAN04G1304 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-12 78.2 176 37.5
Thecc.09G045300 Theobroma cacao HOM05D002813 ORTHO05D003203 1.8e-12 77.4 149 36.9
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 3.1e-12 76.6 174 33.9
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 4.1e-12 76.3 148 31.8
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 4.1e-12 76.3 149 35.6
FvH4_2g35530 Fragaria vesca HOM05D002813 ORTHO05D003203 5.3e-12 75.9 175 36.0
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 7.0e-12 75.5 149 34.2
Potri.006G238300 Populus trichocarpa HOM05D002813 ORTHO05D003203 7.0e-12 75.5 148 34.5
FvH4_2g34980 Fragaria vesca HOM05D002813 ORTHO05D003203 9.1e-12 75.1 207 32.9
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 9.1e-12 75.1 149 36.9
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 1.2e-11 74.7 205 32.2
FAN09G1972 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-11 74.7 58 65.5
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-11 74.7 207 32.9
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 2.0e-11 73.9 179 35.2
FAN15G1653 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-11 73.6 207 32.9
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.5e-11 73.2 207 32.9
FvH4_6g15310 Fragaria vesca HOM05D002813 ORTHO05D003203 5.9e-11 72.4 176 35.8
FAN05G2846 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.9e-11 72.4 117 42.7
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 5.9e-11 72.4 175 30.9
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.7e-11 72.0 149 34.9
FAN09G1014 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-10 71.6 176 35.8
FvH4_2g34990 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-10 71.2 149 34.9
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-10 71.2 149 34.9
FAN14G0433 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-10 70.9 176 35.8
Eucgr.C02935 Eucalyptus grandis HOM05D002813 ORTHO05D003203 2.9e-10 70.1 182 29.1
FAN06G4596 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-10 70.1 163 36.2
FAN27G0414 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.0e-10 69.3 149 34.9
FAN02G3770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-09 68.2 164 36.6
Actinidia14674 Actinidia chinensis HOM05D002813 ORTHO05D003203 1.9e-09 67.4 155 31.6
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-09 67.4 148 34.5
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 2.5e-09 67.0 173 30.6
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 2.5e-09 67.0 207 30.0
FAN21G1333 Fragaria x ananassa HOM05D000259 ORTHO05D008185 9.4e-09 65.1 182 30.8
FAN27G3388 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.4e-09 65.1 172 33.7
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 9.4e-09 65.1 172 30.2
ATR0705G192 Amborella trichopoda HOM05D002813 ORTHO05D003203 1.2e-08 64.7 154 30.5
FAN05G0887 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-08 64.7 164 36.0
FAN08G2569 Fragaria x ananassa HOM05D002813 ORTHO05D046551 1.6e-08 64.3 61 57.4
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 2.1e-08 63.9 191 28.8
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 2.7e-08 63.5 174 29.3
RcHm_v2.0_Chr7g0185401 Rosa chinensis HOM05D002813 ORTHO05D003203 2.7e-08 63.5 170 28.8
FvH4_2g32540 Fragaria vesca HOM05D002813 ORTHO05D003203 4.7e-08 62.8 172 34.3
FvH4_5g12160 Fragaria vesca HOM05D002813 ORTHO05D003203 4.7e-08 62.8 208 29.8
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 4.7e-08 62.8 148 33.8
CiPaw.16G053300 Carya illinoinensis HOM05D002813 ORTHO05D003203 6.1e-08 62.4 99 39.4
FAN15G1647 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.1e-08 62.4 124 37.9
Cc08_g09560 Coffea canephora HOM05D002813 ORTHO05D003203 8.0e-08 62.0 174 30.5
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 8.0e-08 62.0 176 31.8
FAN08G1174 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.0e-08 62.0 172 30.2
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 8.0e-08 62.0 176 29.5
FAN13G2791 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-07 61.6 171 30.4
RcHm_v2.0_Chr6g0306231 Rosa chinensis HOM05D002813 ORTHO05D003203 1.0e-07 61.6 105 41.0
FAN18G2427 Fragaria x ananassa HOM05D002813 ORTHO05D046551 1.4e-07 61.2 55 60.0
FAN18G0945 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-07 60.8 163 30.1
FAN18G3812 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-07 60.8 159 33.3
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-07 60.1 175 34.9
FAN04G2105 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.2e-07 59.3 208 29.3
FAN10G2587 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.2e-07 59.3 170 33.5
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 6.7e-07 58.9 175 34.9
FvH4_3g21752 Fragaria vesca HOM05D028616 ORTHO05D045386 8.8e-07 58.5 31 93.5
FAN11G3388 Fragaria x ananassa HOM05D028616 ORTHO05D045386 8.8e-07 58.5 31 93.5
FAN04G3192 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-06 58.2 164 32.3
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-06 57.8 176 31.2
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-06 57.4 156 32.1
Solyc08g066630.2 Solanum lycopersicum HOM05D002813 ORTHO05D003203 2.0e-06 57.4 127 27.6
FAN18G4233 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-06 57.0 234 30.3
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-06 57.0 167 32.3
FAN24G1750 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.4e-06 56.2 171 33.3
FAN28G0350 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.4e-06 56.2 174 29.3
SGA_v2.0_scaffold103G30003 Striga asiatica HOM05D002813 ORTHO05D003203 4.4e-06 56.2 149 29.5
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.7e-06 55.8 176 30.7
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 7.5e-06 55.5 167 31.7
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.5e-06 55.5 194 29.4
FvH4_1g05120 Fragaria vesca HOM05D002813 ORTHO05D003203 9.7e-06 55.1 174 28.7
FAN06G0128 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.7e-06 55.1 184 30.4
FAN19G0454 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.7e-06 55.1 174 28.7


User provided reference genes

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