Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G3118 Fragaria x ananassa HOM05D000122 ORTHO05D200323 2.8e-82 308.5 154 100.0
RcHm_v2.0_Chr2g0120231 Rosa chinensis HOM05D000122 ORTHO05D000139 5.3e-20 101.7 158 44.3
Cfa016389 Carpinus fangiana HOM05D000122 ORTHO05D000139 9.9e-11 70.9 127 30.7
FAN06G3477 Fragaria x ananassa HOM05D000122 ORTHO05D000139 2.4e-09 66.2 78 42.3
FAN10G1841 Fragaria x ananassa HOM05D000122 ORTHO05D000139 2.4e-09 66.2 78 42.3
FAN10G2238 Fragaria x ananassa HOM05D000122 ORTHO05D000139 2.4e-09 66.2 78 42.3
FAN01G2327 Fragaria x ananassa HOM05D000122 ORTHO05D000139 3.2e-09 65.9 78 42.3
FAN10G1137 Fragaria x ananassa HOM05D000122 ORTHO05D000139 3.2e-09 65.9 79 41.8
Cfa016380 Carpinus fangiana HOM05D000122 ORTHO05D000139 5.5e-09 65.1 128 32.0
CANSAT21G0010 Cannabis sativa HOM05D000122 ORTHO05D000139 7.1e-09 64.7 72 43.1
FAN01G0198 Fragaria x ananassa HOM05D000122 ORTHO05D020669 7.1e-09 64.7 74 44.6
FAN03G1175 Fragaria x ananassa HOM05D000122 ORTHO05D000139 7.1e-09 64.7 79 41.8
FAN10G0599 Fragaria x ananassa HOM05D000122 ORTHO05D013072 1.2e-08 63.9 75 41.3
MD05G1300000 Malus domestica HOM05D000122 ORTHO05D000139 1.2e-08 63.9 74 39.2
Prupe.6G143100 Prunus persica HOM05D000122 ORTHO05D000139 1.6e-08 63.5 88 38.6
Cfa016381 Carpinus fangiana HOM05D000122 ORTHO05D000139 2.1e-08 63.2 79 38.0
FvH4_7g31861 Fragaria vesca HOM05D000122 ORTHO05D000139 2.1e-08 63.2 74 43.2
MD05G1299700 Malus domestica HOM05D000122 ORTHO05D000139 2.1e-08 63.2 74 39.2
FAN03G0406 Fragaria x ananassa HOM05D000122 ORTHO05D000139 3.5e-08 62.4 79 40.5
Prupe.7G210600 Prunus persica HOM05D000122 ORTHO05D011900 3.5e-08 62.4 75 41.3
QL09p010261 Quercus lobata HOM05D000122 ORTHO05D000139 3.5e-08 62.4 70 37.1
FAN06G4851 Fragaria x ananassa HOM05D000122 ORTHO05D000139 4.6e-08 62.0 79 40.5
Prupe.6G143000 Prunus persica HOM05D000122 ORTHO05D000139 7.9e-08 61.2 90 37.8
Prupe.7G210900 Prunus persica HOM05D000122 ORTHO05D011900 1.3e-07 60.5 70 42.9
RcHm_v2.0_Chr5g0048781 Rosa chinensis HOM05D000122 ORTHO05D000139 1.3e-07 60.5 82 40.2
MD01G1054600 Malus domestica HOM05D000122 ORTHO05D000139 1.8e-07 60.1 76 43.4
MD08G1241600 Malus domestica HOM05D000122 ORTHO05D000139 1.8e-07 60.1 75 36.0
MD04G1004700 Malus domestica HOM05D000122 ORTHO05D000139 5.1e-07 58.5 78 37.2
Prupe.5G162000 Prunus persica HOM05D000122 ORTHO05D000139 5.1e-07 58.5 78 42.3
RcHm_v2.0_Chr1g0381131 Rosa chinensis HOM05D000122 ORTHO05D000139 5.1e-07 58.5 71 42.3
RcHm_v2.0_Chr2g0116391 Rosa chinensis HOM05D000122 ORTHO05D000139 5.1e-07 58.5 79 35.4
CiPaw.05G256100 Carya illinoinensis HOM05D000122 ORTHO05D000139 6.7e-07 58.2 76 38.2
FAN10G1111 Fragaria x ananassa HOM05D000122 ORTHO05D000139 6.7e-07 58.2 66 45.5
FAN10G3231 Fragaria x ananassa HOM05D000122 ORTHO05D000139 6.7e-07 58.2 66 45.5
Prupe.2G312500 Prunus persica HOM05D000122 ORTHO05D000139 6.7e-07 58.2 68 45.6
RcHm_v2.0_Chr5g0048811 Rosa chinensis HOM05D000122 ORTHO05D000139 6.7e-07 58.2 82 39.0
CANSAT21G1692 Cannabis sativa HOM05D000122 ORTHO05D000139 8.7e-07 57.8 72 33.3
Cfa016384 Carpinus fangiana HOM05D000122 ORTHO05D000139 8.7e-07 57.8 76 34.2
FvH4_1g22250 Fragaria vesca HOM05D000122 ORTHO05D000139 8.7e-07 57.8 80 36.2
FvH4_7g31201 Fragaria vesca HOM05D000122 ORTHO05D000139 8.7e-07 57.8 66 45.5
FvH4_7g31300 Fragaria vesca HOM05D000122 ORTHO05D000139 8.7e-07 57.8 66 45.5
FvH4_7g31310 Fragaria vesca HOM05D000122 ORTHO05D012678 8.7e-07 57.8 66 45.5
FAN06G3593 Fragaria x ananassa HOM05D000122 ORTHO05D012678 8.7e-07 57.8 66 45.5
FAN06G4197 Fragaria x ananassa HOM05D000122 ORTHO05D012678 8.7e-07 57.8 66 45.5
FAN19G1507 Fragaria x ananassa HOM05D000122 ORTHO05D000139 8.7e-07 57.8 80 36.2
FAN23G0598 Fragaria x ananassa HOM05D000122 ORTHO05D000139 8.7e-07 57.8 80 36.2
FAN26G0425 Fragaria x ananassa HOM05D000122 ORTHO05D000139 8.7e-07 57.8 80 36.2
FAN28G1864 Fragaria x ananassa HOM05D000122 ORTHO05D000139 8.7e-07 57.8 80 36.2
FAN01G1167 Fragaria x ananassa HOM05D000122 ORTHO05D000139 1.1e-06 57.4 66 43.9
MD07G1140800 Malus domestica HOM05D000122 ORTHO05D000139 1.1e-06 57.4 91 37.4
Cfa009821 Carpinus fangiana HOM05D000122 ORTHO05D000139 1.5e-06 57.0 76 36.8
MD08G1214800 Malus domestica HOM05D000122 ORTHO05D000139 1.9e-06 56.6 128 31.2
QL09p010471 Quercus lobata HOM05D000122 ORTHO05D000139 1.9e-06 56.6 78 34.6
FvH4_7g15084 Fragaria vesca HOM05D003847 ORTHO05D004976 2.5e-06 56.2 71 46.5
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.5e-06 56.2 71 46.5
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.5e-06 56.2 71 46.5
RcHm_v2.0_Chr2g0110361 Rosa chinensis HOM05D000122 ORTHO05D000139 2.5e-06 56.2 71 45.1
CANSAT21G1861 Cannabis sativa HOM05D000122 ORTHO05D000139 4.3e-06 55.5 72 38.9
Prupe.4G109600 Prunus persica HOM05D000122 ORTHO05D025490 4.3e-06 55.5 78 39.7
MD07G1292700 Malus domestica HOM05D000122 ORTHO05D000139 5.6e-06 55.1 76 36.8
RcHm_v2.0_Chr1g0380291 Rosa chinensis HOM05D000122 ORTHO05D000139 5.6e-06 55.1 68 45.6
QL11p006035 Quercus lobata HOM05D000122 ORTHO05D000139 7.4e-06 54.7 139 29.5
FvH4_7g31840 Fragaria vesca HOM05D000122 ORTHO05D014632 9.6e-06 54.3 83 41.0
QL11p005880 Quercus lobata HOM05D000122 ORTHO05D000139 9.6e-06 54.3 82 31.7
QL11p006602 Quercus lobata HOM05D000122 ORTHO05D000139 9.6e-06 54.3 82 31.7
RcHm_v2.0_Chr1g0324571 Rosa chinensis HOM05D000122 ORTHO05D000139 9.6e-06 54.3 80 36.2


User provided reference genes

Program Settings