Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G2933 Fragaria x ananassa HOM05D004809 ORTHO05D035441 1.3e-51 206.1 105 100.0
FvH4_7g05461 Fragaria vesca HOM05D004809 ORTHO05D035441 3.2e-21 105.1 51 100.0
FAN04G1536 Fragaria x ananassa HOM05D004809 ORTHO05D006732 2.7e-20 102.1 50 98.0
FAN08G1717 Fragaria x ananassa HOM05D004809 ORTHO05D006732 4.7e-20 101.3 50 98.0
FvH4_5g38020 Fragaria vesca HOM05D004809 ORTHO05D006732 4.0e-19 98.2 50 94.0
FAN18G3489 Fragaria x ananassa HOM05D004809 ORTHO05D006732 4.0e-19 98.2 50 94.0
RcHm_v2.0_Chr1g0333991 Rosa chinensis HOM05D004809 ORTHO05D006732 1.3e-17 93.2 48 89.6
RcHm_v2.0_Chr1g0333101 Rosa chinensis HOM05D004809 ORTHO05D006732 4.8e-17 91.3 46 91.3
Prupe.2G084800 Prunus persica HOM05D004809 ORTHO05D006732 1.7e-14 82.8 49 81.6
MD07G1067800 Malus domestica HOM05D004809 ORTHO05D006732 6.5e-14 80.9 49 75.5
MD02G1248400 Malus domestica HOM05D004809 ORTHO05D006732 1.1e-13 80.1 51 72.5
RcHm_v2.0_Chr1g0333031 Rosa chinensis HOM05D004809 ORTHO05D006732 1.5e-13 79.7 54 74.1
Haze_02592 Corylus avellana HOM05D004809 ORTHO05D006732 2.6e-10 68.9 49 69.4
GSVIVG01034738001 Vitis vinifera HOM05D004809 ORTHO05D006732 4.4e-10 68.2 49 65.3
FAN06G1605 Fragaria x ananassa HOM05D002054 ORTHO05D005362 7.5e-10 67.4 57 70.2
CiPaw.13G037200 Carya illinoinensis HOM05D004809 ORTHO05D006732 1.3e-09 66.6 49 69.4
Eucgr.G02708 Eucalyptus grandis HOM05D004809 ORTHO05D006732 1.3e-09 66.6 47 66.0
Manes.07G089701 Manihot esculenta HOM05D004809 ORTHO05D006732 2.8e-09 65.5 48 64.6
Duzib106G1880 Durio zibethinus HOM05D004809 ORTHO05D006732 3.7e-09 65.1 46 65.2
Dinv20809 Davidia involucrata HOM05D004809 ORTHO05D006732 4.9e-09 64.7 45 66.7
Sed0005221 Sechium edule HOM05D004809 ORTHO05D006732 8.3e-09 63.9 45 64.4
Thecc.10G104900 Theobroma cacao HOM05D004809 ORTHO05D006732 8.3e-09 63.9 46 67.4
CANSAT56G2003 Cannabis sativa HOM05D004809 ORTHO05D006732 1.1e-08 63.5 45 68.9
Gorai.008G098400 Gossypium raimondii HOM05D004809 ORTHO05D006732 1.4e-08 63.2 46 63.0
Rhsim03G0105000 Rhododendron simsii HOM05D004809 ORTHO05D006732 1.4e-08 63.2 47 66.0
Gohir.D12G091000 Gossypium hirsutum HOM05D004809 ORTHO05D006732 1.8e-08 62.8 46 60.9
Lj2A29T80 Lonicera japonica HOM05D004809 ORTHO05D006732 1.8e-08 62.8 39 69.2
FAN05G0814 Fragaria x ananassa HOM05D011709 ORTHO05D035441 3.1e-08 62.0 55 63.6
Sc06g0002220 Simmondsia chinensis HOM05D004809 ORTHO05D006732 9.2e-08 60.5 45 62.2
Cpa.g.sc19.17 Carica papaya HOM05D004809 ORTHO05D006732 1.2e-07 60.1 48 58.3
QL04p042558 Quercus lobata HOM05D004809 ORTHO05D006732 1.2e-07 60.1 76 46.1
QL04p042573 Quercus lobata HOM05D004809 ORTHO05D006732 1.2e-07 60.1 76 46.1
Sabra08G0016600 Salix brachista HOM05D004809 ORTHO05D006732 1.2e-07 60.1 49 59.2
CSS0050047 Camellia sinensis var. sinensis HOM05D004809 ORTHO05D006732 3.5e-07 58.5 47 61.7
PGR142G2585 Punica granatum HOM05D004809 ORTHO05D006732 3.5e-07 58.5 49 55.1
Nn6g35016 Nelumbo nucifera HOM05D004809 ORTHO05D006732 5.9e-07 57.8 48 62.5
TAR636G3234 Trochodendron aralioides HOM05D004809 ORTHO05D006732 5.9e-07 57.8 49 59.2
Peaxi162Scf00244g01123 Petunia axillaris HOM05D004809 ORTHO05D006732 7.7e-07 57.4 41 68.3
Cc02_g09980 Coffea canephora HOM05D004809 ORTHO05D006732 1.3e-06 56.6 39 61.5
Solyc11g007320.2 Solanum lycopersicum HOM05D004809 ORTHO05D006732 1.3e-06 56.6 47 57.4
Hma1.2p1_0352F.1_g133000 Hydrangea macrophylla HOM05D004809 ORTHO05D006732 1.7e-06 56.2 45 57.8
Hma1.2p1_0352F.1_g133010 Hydrangea macrophylla HOM05D004809 ORTHO05D006732 1.7e-06 56.2 45 57.8
Potri.008G024700 Populus trichocarpa HOM05D004809 ORTHO05D006732 1.7e-06 56.2 49 55.1
Sopen11g003210 Solanum pennellii HOM05D004809 ORTHO05D006732 1.7e-06 56.2 47 57.4
Lalb_Chr02g0151411 Lupinus albus HOM05D004809 ORTHO05D006732 2.3e-06 55.8 37 64.9
Oeu015034.1 Olea europaea HOM05D004809 ORTHO05D006732 2.3e-06 55.8 45 57.8
TPR.G2503 Trifolium pratense HOM05D004809 ORTHO05D006732 2.9e-06 55.5 29 79.3
arahy.Tifrunner.gnm1.ann1.9JEX28 Arachis hypogaea HOM05D004809 ORTHO05D006732 3.8e-06 55.1 47 55.3
Actinidia18582 Actinidia chinensis HOM05D004809 ORTHO05D006732 5.0e-06 54.7 77 44.2
Nitab4.5_0000962g0070 Nicotiana tabacum HOM05D004809 ORTHO05D006732 5.0e-06 54.7 42 61.9
Nitab4.5_0005390g0010 Nicotiana tabacum HOM05D004809 ORTHO05D006732 5.0e-06 54.7 36 66.7
Hund06767 Selenicereus undatus HOM05D004809 ORTHO05D006732 5.0e-06 54.7 44 54.5


User provided reference genes

Program Settings