Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G2915 Fragaria x ananassa HOM05D000865 ORTHO05D000739 4.1e-53 211.1 102 100.0
FAN06G3973 Fragaria x ananassa HOM05D000865 ORTHO05D000739 7.7e-52 206.8 102 98.0
FAN11G0027 Fragaria x ananassa HOM05D018336 ORTHO05D011413 1.9e-34 149.1 90 85.6
FAN05G0203 Fragaria x ananassa HOM05D000865 ORTHO05D000739 1.0e-32 143.3 70 100.0
FAN19G2234 Fragaria x ananassa HOM05D000865 ORTHO05D000739 1.0e-32 143.3 70 100.0
FAN26G0033 Fragaria x ananassa HOM05D000865 ORTHO05D000739 1.0e-32 143.3 70 100.0
FAN22G2168 Fragaria x ananassa HOM05D000865 ORTHO05D000739 2.3e-32 142.1 70 98.6
FAN12G4021 Fragaria x ananassa HOM05D000865 ORTHO05D000739 8.8e-32 140.2 70 98.6
FvH4_4g17890 Fragaria vesca HOM05D000865 ORTHO05D000739 1.5e-31 139.4 76 93.4
FAN12G1524 Fragaria x ananassa HOM05D000865 ORTHO05D000739 1.5e-31 139.4 76 93.4
FAN04G1523 Fragaria x ananassa HOM05D000865 ORTHO05D011413 1.3e-30 136.3 77 90.9
FAN15G0232 Fragaria x ananassa HOM05D000865 ORTHO05D000739 7.0e-29 130.6 65 96.9
FAN26G2250 Fragaria x ananassa HOM05D000865 ORTHO05D011413 1.6e-28 129.4 63 100.0
FAN12G1752 Fragaria x ananassa HOM05D000865 ORTHO05D000739 6.5e-27 124.0 78 82.1
FAN18G3126 Fragaria x ananassa HOM05D000025 ORTHO05D011413 3.8e-19 98.2 46 100.0
FAN02G3969 Fragaria x ananassa HOM05D000025 ORTHO05D011413 1.5e-18 96.3 46 97.8
FAN10G4215 Fragaria x ananassa HOM05D000025 ORTHO05D011413 1.5e-18 96.3 46 97.8
FAN23G0438 Fragaria x ananassa HOM05D000025 ORTHO05D011413 1.5e-18 96.3 46 97.8
FvH4_4g17880 Fragaria vesca HOM05D000865 ORTHO05D000739 1.5e-15 86.3 73 67.1
RcHm_v2.0_Chr4g0422011 Rosa chinensis HOM05D000865 ORTHO05D000739 3.4e-15 85.1 70 62.9
FAN22G2263 Fragaria x ananassa HOM05D000865 ORTHO05D000739 7.5e-15 84.0 73 65.8
FAN17G0945 Fragaria x ananassa HOM05D000865 ORTHO05D000739 6.4e-14 80.9 73 64.4
Nn4g25898 Nelumbo nucifera HOM05D000865 ORTHO05D000739 6.6e-11 70.9 55 67.3
TAR362G0271 Trochodendron aralioides HOM05D000865 ORTHO05D000739 8.6e-11 70.5 55 63.6
MBI19_g13126_MAGBIO Magnolia biondii HOM05D000865 ORTHO05D000739 1.9e-10 69.3 56 64.3
MD12G1216300 Malus domestica HOM05D000865 ORTHO05D000739 1.9e-10 69.3 63 57.1
MD16G1170900 Malus domestica HOM05D000865 ORTHO05D000739 1.9e-10 69.3 51 64.7
Dinv29770 Davidia involucrata HOM05D000865 ORTHO05D000739 2.5e-10 68.9 53 66.0
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 9.5e-10 67.0 79 50.6
QL06p008669 Quercus lobata HOM05D000865 ORTHO05D000739 9.5e-10 67.0 49 69.4
Thecc.04G283200 Theobroma cacao HOM05D000865 ORTHO05D000739 9.5e-10 67.0 48 64.6
MD02G1019900 Malus domestica HOM05D000865 ORTHO05D000739 1.2e-09 66.6 52 63.5
SGA_v2.0_scaffold67G22660 Striga asiatica HOM05D000865 ORTHO05D000739 1.6e-09 66.2 67 52.2
Potri.010G024200 Populus trichocarpa HOM05D000865 ORTHO05D000739 2.1e-09 65.9 59 57.6
Glyma.07G248600 Glycine max HOM05D000865 ORTHO05D000739 2.8e-09 65.5 70 48.6
MD13G1169800 Malus domestica HOM05D000865 ORTHO05D000739 2.8e-09 65.5 52 61.5
vmacro15241 Vaccinium macrocarpon HOM05D000865 ORTHO05D000739 2.8e-09 65.5 67 49.3
TAR633G1600 Trochodendron aralioides HOM05D000865 ORTHO05D000739 4.7e-09 64.7 62 61.3
Manes.15G013300 Manihot esculenta HOM05D000865 ORTHO05D000739 8.0e-09 63.9 74 52.7
Phvul.003G104400 Phaseolus vulgaris HOM05D000865 ORTHO05D000739 1.1e-08 63.5 70 50.0
DCAR_024563 Daucus carota HOM05D000865 ORTHO05D000739 1.4e-08 63.2 60 55.0
Prupe.6G322500 Prunus persica HOM05D000865 ORTHO05D000739 1.4e-08 63.2 59 55.9
CSS0011101 Camellia sinensis var. sinensis HOM05D000865 ORTHO05D000739 1.8e-08 62.8 64 51.6
VMungo1215G3134 Vigna mungo HOM05D000865 ORTHO05D000739 1.8e-08 62.8 78 44.9
TAR636G2581 Trochodendron aralioides HOM05D000865 ORTHO05D000739 2.3e-08 62.4 57 52.6
GSVIVG01031119001 Vitis vinifera HOM05D000865 ORTHO05D000739 2.3e-08 62.4 58 55.2
Cfa006615 Carpinus fangiana HOM05D000865 ORTHO05D000739 3.1e-08 62.0 63 55.6
Cfa015375 Carpinus fangiana HOM05D000865 ORTHO05D000739 3.1e-08 62.0 61 59.0
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 3.1e-08 62.0 52 61.5
Nitab4.5_0000191g0040 Nicotiana tabacum HOM05D000865 ORTHO05D000739 3.1e-08 62.0 44 59.1
Hma1.2p1_1374F.1_g278910 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 4.0e-08 61.6 58 53.4
Lsat_1_v5_gn_5_53581 Lactuca sativa HOM05D000865 ORTHO05D000739 4.0e-08 61.6 47 63.8
Nitab4.5_0000960g0190 Nicotiana tabacum HOM05D000865 ORTHO05D000739 4.0e-08 61.6 68 45.6
Prupe.1G138000 Prunus persica HOM05D000865 ORTHO05D000739 4.0e-08 61.6 35 77.1
Lj6P674T15 Lonicera japonica HOM05D000865 ORTHO05D000739 5.2e-08 61.2 47 63.8
MD04G1202300 Malus domestica HOM05D000865 ORTHO05D000739 5.2e-08 61.2 58 51.7
Peaxi162Scf00534g00013 Petunia axillaris HOM05D000865 ORTHO05D000739 5.2e-08 61.2 44 54.5
Rhsim02G0009700 Rhododendron simsii HOM05D000407 ORTHO05D000739 5.2e-08 61.2 64 48.4
Rhsim05G0141500 Rhododendron simsii HOM05D000865 ORTHO05D000739 5.2e-08 61.2 62 56.5
COL.COLO4_13890 Corchorus olitorius HOM05D000865 ORTHO05D000739 8.9e-08 60.5 48 60.4
Atru.chr4.2817 Acer truncatum HOM05D000865 ORTHO05D000739 1.2e-07 60.1 53 56.6
Gohir.A09G239900 Gossypium hirsutum HOM05D000865 ORTHO05D000739 1.2e-07 60.1 64 51.6
Gohir.D09G240700 Gossypium hirsutum HOM05D000865 ORTHO05D000739 1.2e-07 60.1 64 51.6
Gorai.006G263800 Gossypium raimondii HOM05D000865 ORTHO05D000739 1.2e-07 60.1 64 51.6
HanXRQChr03g0080791 Helianthus annuus HOM05D000865 ORTHO05D000739 1.2e-07 60.1 56 58.9
Lj6g0011988 Lotus japonicus HOM05D000865 ORTHO05D000739 1.2e-07 60.1 94 43.6
PSO832G1537 Papaver somniferum HOM05D000865 ORTHO05D000739 1.2e-07 60.1 84 47.6
Ciclev10005548m.g Citrus clementina HOM05D000865 ORTHO05D000739 1.5e-07 59.7 71 47.9
Ciclev10005259m.g Citrus clementina HOM05D000865 ORTHO05D000739 2.0e-07 59.3 59 54.2
DCAR_027081 Daucus carota HOM05D000865 ORTHO05D000739 2.0e-07 59.3 69 49.3
CiPaw.08G162900 Carya illinoinensis HOM05D000865 ORTHO05D000739 2.6e-07 58.9 54 59.3
Duzib151G1190 Durio zibethinus HOM05D000865 ORTHO05D000739 2.6e-07 58.9 48 60.4
Duzib212G0059 Durio zibethinus HOM05D000865 ORTHO05D000739 2.6e-07 58.9 49 55.1
ECA240G0693 Erigeron canadensis HOM05D000865 ORTHO05D000739 3.4e-07 58.5 55 54.5
Lj4g0012125 Lotus japonicus HOM05D000865 ORTHO05D000739 3.4e-07 58.5 55 58.2
vmacro15240 Vaccinium macrocarpon HOM05D000865 ORTHO05D000739 3.4e-07 58.5 60 53.3
CDE02G1898 Ceratophyllum demersum HOM05D000865 ORTHO05D000739 4.4e-07 58.2 41 68.3
Manes.08G119200 Manihot esculenta HOM05D000865 ORTHO05D000739 4.4e-07 58.2 60 55.0
Cpa.g.sc16.163 Carica papaya HOM05D000865 ORTHO05D000739 5.8e-07 57.8 55 56.4
Aqoxy2G03021 Aquilegia oxysepala HOM05D000865 ORTHO05D000739 7.5e-07 57.4 47 61.7
HanXRQChr04g0122401 Helianthus annuus HOM05D000865 ORTHO05D000739 7.5e-07 57.4 61 54.1
Rhsim02G0010900 Rhododendron simsii HOM05D000865 ORTHO05D000739 7.5e-07 57.4 54 50.0
PSO591G0270 Papaver somniferum HOM05D000865 ORTHO05D000739 9.8e-07 57.0 84 46.4
Haze_04160 Corylus avellana HOM05D000865 ORTHO05D000739 1.3e-06 56.6 63 52.4
FAN09G1327 Fragaria x ananassa HOM05D000865 ORTHO05D000739 1.3e-06 56.6 61 52.5
Potri.008G209800 Populus trichocarpa HOM05D000865 ORTHO05D000739 1.3e-06 56.6 55 54.5
Rhsim02G0010800 Rhododendron simsii HOM05D000407 ORTHO05D000739 1.3e-06 56.6 77 39.0
Medtr2g436900 Medicago truncatula HOM05D000865 ORTHO05D000739 2.2e-06 55.8 105 36.2
Rhsim02G0009800 Rhododendron simsii HOM05D000865 ORTHO05D000739 2.2e-06 55.8 58 51.7
Sc13g0003500 Simmondsia chinensis HOM05D000865 ORTHO05D000739 2.2e-06 55.8 70 45.7
Actinidia00029 Actinidia chinensis HOM05D000865 ORTHO05D000739 2.9e-06 55.5 40 60.0
Eucgr.H03902 Eucalyptus grandis HOM05D000865 ORTHO05D000739 2.9e-06 55.5 62 50.0
FAN05G2988 Fragaria x ananassa HOM05D000865 ORTHO05D000739 2.9e-06 55.5 61 50.8
HanXRQChr03g0080801 Helianthus annuus HOM05D000865 ORTHO05D000739 2.9e-06 55.5 58 53.4
MBI19_g00436_MAGBIO Magnolia biondii HOM05D000865 ORTHO05D000739 2.9e-06 55.5 54 57.4
Oeu024979.1 Olea europaea HOM05D000865 ORTHO05D000739 2.9e-06 55.5 69 50.7
FvH4_6g06320 Fragaria vesca HOM05D000865 ORTHO05D000739 3.7e-06 55.1 61 50.8
FAN02G4228 Fragaria x ananassa HOM05D002691 ORTHO05D000739 3.7e-06 55.1 61 49.2
FAN14G4907 Fragaria x ananassa HOM05D000865 ORTHO05D000739 3.7e-06 55.1 61 50.8
CSS0025346 Camellia sinensis var. sinensis HOM05D000865 ORTHO05D000739 4.9e-06 54.7 49 61.2
CANSAT54G1245 Cannabis sativa HOM05D000865 ORTHO05D000739 4.9e-06 54.7 52 55.8
Ca_01948_v3 Cicer arietinum L. HOM05D000865 ORTHO05D000739 4.9e-06 54.7 48 58.3
RcHm_v2.0_Chr3g0455361 Rosa chinensis HOM05D000865 ORTHO05D000739 4.9e-06 54.7 61 47.5
Actinidia14306 Actinidia chinensis HOM05D000865 ORTHO05D000739 6.4e-06 54.3 41 61.0
HanXRQChr17g0566961 Helianthus annuus HOM05D000865 ORTHO05D000739 6.4e-06 54.3 55 56.4
Sed0007020 Sechium edule HOM05D000865 ORTHO05D000739 6.4e-06 54.3 59 52.5
Cc00_g10550 Coffea canephora HOM05D000865 ORTHO05D000739 8.3e-06 53.9 31 71.0
Lsat_1_v5_gn_2_72960 Lactuca sativa HOM05D000865 ORTHO05D000739 8.3e-06 53.9 43 62.8
PGR083G0395 Punica granatum HOM05D000865 ORTHO05D000739 8.3e-06 53.9 51 56.9


User provided reference genes

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