Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G2890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 5.6e-89 330.9 162 100.0
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.4e-84 316.2 158 98.7
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.6e-83 312.8 158 97.5
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.0e-82 310.1 158 97.5
FvH4_3g38760 Fragaria vesca HOM05D003726 ORTHO05D003520 1.7e-74 282.7 158 89.9
FAN11G0812 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.7e-74 282.7 158 89.9
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 1.3e-64 250.0 157 83.4
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 2.4e-39 166.0 152 61.2
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 9.4e-36 154.1 160 56.2
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 1.2e-35 153.7 158 56.3
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 1.4e-23 113.6 161 46.0
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.4e-23 113.6 163 46.6
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 9.1e-23 110.9 166 42.8
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 2.2e-21 106.3 159 42.1
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 1.2e-19 100.5 166 42.2
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 4.7e-19 98.6 156 40.4
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 6.1e-19 98.2 159 40.3
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 2.3e-18 96.3 145 43.4
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 4.0e-18 95.5 159 38.4
Dinv03102 Davidia involucrata HOM05D003726 ORTHO05D003520 6.8e-18 94.7 147 40.1
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 4.4e-17 92.0 148 38.5
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 7.5e-17 91.3 167 39.5
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 2.2e-16 89.7 160 40.0
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 2.2e-16 89.7 160 40.0
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 8.3e-16 87.8 160 39.4
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 9.1e-15 84.3 166 34.9
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 1.2e-14 84.0 153 35.3
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 2.7e-14 82.8 149 38.3
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 5.9e-14 81.6 148 37.2
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 2.2e-13 79.7 163 36.8
Rhsim01G0236900 Rhododendron simsii HOM05D003726 ORTHO05D003520 3.8e-13 79.0 159 35.2
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 5.0e-13 78.6 159 36.5
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 6.5e-13 78.2 166 31.9
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 8.5e-13 77.8 162 34.6
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 1.1e-12 77.4 148 37.8
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.5e-12 77.0 164 32.9
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 1.9e-12 76.6 159 33.3
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 2.5e-12 76.3 155 34.2
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 4.2e-12 75.5 151 39.1
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 5.5e-12 75.1 151 39.1
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 1.2e-11 73.9 168 32.7
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.6e-11 73.6 173 32.9
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 4.7e-11 72.0 150 34.0
Ca_05609_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 4.7e-11 72.0 164 35.4
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 4.7e-11 72.0 155 34.2
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 6.1e-11 71.6 170 33.5
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 1.8e-10 70.1 139 36.7
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 2.3e-10 69.7 170 31.2
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 6.8e-10 68.2 151 34.4
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 2.0e-09 66.6 175 31.4
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 2.6e-09 66.2 167 32.3
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 5.7e-09 65.1 147 36.1
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 5.7e-09 65.1 144 35.4
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 5.7e-09 65.1 153 34.0
Medtr5g071090 Medicago truncatula HOM05D003726 ORTHO05D003520 9.8e-09 64.3 164 32.3
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 3.7e-08 62.4 147 34.7
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 8.3e-08 61.2 57 54.4
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 8.3e-08 61.2 173 31.8
MBI03_g31834_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 1.1e-07 60.8 164 28.7
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 1.1e-07 60.8 164 28.7
arahy.Tifrunner.gnm1.ann1.XHL4C7 Arachis hypogaea HOM05D003726 ORTHO05D003520 1.4e-07 60.5 156 30.1
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 2.4e-07 59.7 154 30.5
Cc01_g14320 Coffea canephora HOM05D003726 ORTHO05D003520 3.1e-07 59.3 162 32.7
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 4.1e-07 58.9 188 26.6
PGR102G0699 Punica granatum HOM05D003726 ORTHO05D003520 5.4e-07 58.5 121 32.2
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 9.2e-07 57.8 154 26.6
Atru.chr3.4198 Acer truncatum HOM05D003726 ORTHO05D003520 1.2e-06 57.4 164 32.3
arahy.Tifrunner.gnm1.ann1.8UNH89 Arachis hypogaea HOM05D003726 ORTHO05D003520 1.2e-06 57.4 156 29.5
Ca_14944_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 1.2e-06 57.4 144 31.9
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 1.2e-06 57.4 146 32.9
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 2.0e-06 56.6 161 32.3
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 4.5e-06 55.5 152 25.7
Hund20990 Selenicereus undatus HOM05D003726 ORTHO05D003520 4.5e-06 55.5 166 31.9


User provided reference genes

Program Settings