Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G2767 Fragaria x ananassa HOM05D014139 ORTHO05D020686 2.8e-257 891.3 427 100.0
FvH4_3g15921 Fragaria vesca HOM05D014139 ORTHO05D020686 2.2e-254 881.7 427 99.3
FAN11G3701 Fragaria x ananassa HOM05D014139 ORTHO05D020686 2.9e-254 881.3 427 99.3
FAN11G0344 Fragaria x ananassa HOM05D014139 ORTHO05D020686 3.8e-254 880.9 427 98.8
Prupe.1G053000 Prunus persica HOM05D014139 ORTHO05D020686 6.5e-44 182.6 447 34.2
FAN12G4045 Fragaria x ananassa HOM05D017087 ORTHO05D019163 1.4e-41 174.9 395 36.2
FvH4_4g05500 Fragaria vesca HOM05D017087 ORTHO05D019163 1.8e-41 174.5 384 36.2
FvH4_7g24700 Fragaria vesca HOM05D014139 ORTHO05D046366 5.1e-41 172.9 396 35.6
FAN06G1811 Fragaria x ananassa HOM05D014139 ORTHO05D046366 5.1e-41 172.9 396 34.6
Prupe.1G052900 Prunus persica HOM05D014139 ORTHO05D020686 2.2e-39 167.5 381 34.9
FAN01G1681 Fragaria x ananassa HOM05D014139 ORTHO05D019163 2.7e-34 150.6 397 31.5
FAN12G4018 Fragaria x ananassa HOM05D017087 ORTHO05D019163 1.0e-33 148.7 307 37.8
FAN17G2437 Fragaria x ananassa HOM05D017087 ORTHO05D019163 3.7e-31 140.2 369 33.1
Hma1.2p1_0112F.1_g054880 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 1.4e-22 111.7 399 26.6
FAN10G0490 Fragaria x ananassa HOM05D014139 ORTHO05D000074 5.4e-22 109.8 177 39.0
Prupe.1G050400 Prunus persica HOM05D000151 ORTHO05D000074 2.9e-20 104.0 412 26.9
FAN07G1148 Fragaria x ananassa HOM05D017087 ORTHO05D019163 3.8e-20 103.6 203 39.9
FvH4_4g05202 Fragaria vesca HOM05D017087 ORTHO05D019163 6.5e-20 102.8 213 37.6
QL04p019119 Quercus lobata HOM05D000151 ORTHO05D000074 1.9e-19 101.3 402 26.9
MD13G1223500 Malus domestica HOM05D000151 ORTHO05D000074 5.5e-19 99.8 414 26.1
MD16G1228400 Malus domestica HOM05D000151 ORTHO05D000074 3.6e-18 97.1 416 26.2
Manes.07G048850 Manihot esculenta HOM05D000151 ORTHO05D000074 5.2e-17 93.2 409 27.1
Manes.07G051600 Manihot esculenta HOM05D000151 ORTHO05D000074 5.2e-17 93.2 407 27.3
FvH4_4g05011 Fragaria vesca HOM05D000151 ORTHO05D000074 3.4e-16 90.5 375 26.9
Manes.07G048800 Manihot esculenta HOM05D000151 ORTHO05D000074 4.4e-16 90.1 409 26.2
RcHm_v2.0_Chr4g0430571 Rosa chinensis HOM05D014495 ORTHO05D014615 4.4e-16 90.1 391 27.6
Ciclev10006417m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.7e-15 88.2 417 25.2
CSS0038976 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 4.9e-15 86.7 414 25.4
Duzib151G0485 Durio zibethinus HOM05D000151 ORTHO05D000074 3.1e-14 84.0 420 26.0
TWI74G0260 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 7.0e-14 82.8 405 27.9
Cfa001991 Carpinus fangiana HOM05D000151 ORTHO05D000074 7.7e-13 79.3 370 26.2
FAN22G0114 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.0e-12 79.0 361 27.1
Ciclev10006735m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.7e-12 78.2 430 25.6
TWI09G0382 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.7e-12 78.2 384 24.7
DCAR_013283 Daucus carota HOM05D000151 ORTHO05D000074 2.3e-12 77.8 397 26.2
QL05p064445 Quercus lobata HOM05D000151 ORTHO05D000074 3.8e-12 77.0 415 24.3
Thecc.04G266500 Theobroma cacao HOM05D000151 ORTHO05D000074 3.8e-12 77.0 403 22.1
Manes.07G048900 Manihot esculenta HOM05D000151 ORTHO05D000074 1.5e-11 75.1 320 28.1
TWI63G1822 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.5e-11 75.1 297 28.6
TWI53G1253 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 3.3e-11 73.9 322 29.2
Prupe.6G285500 Prunus persica HOM05D000151 ORTHO05D000074 4.2e-11 73.6 321 24.6
TWI09G1230 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 9.5e-11 72.4 401 26.2
QL04p008960 Quercus lobata HOM05D000151 ORTHO05D000074 1.2e-10 72.0 298 26.2
QL04p009352 Quercus lobata HOM05D000151 ORTHO05D000074 1.6e-10 71.6 206 29.6
Gohir.D12G260000 Gossypium hirsutum HOM05D000151 ORTHO05D000074 2.1e-10 71.2 417 23.3
Gorai.008G278500 Gossypium raimondii HOM05D000151 ORTHO05D000074 2.8e-10 70.9 417 23.0
FvH4_4g26320 Fragaria vesca HOM05D000151 ORTHO05D000074 4.7e-10 70.1 410 25.1
Lalb_Chr19g0133241 Lupinus albus HOM05D006368 ORTHO05D006739 6.1e-10 69.7 440 23.6
CSS0028834 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.0e-09 68.9 383 25.1
RcHm_v2.0_Chr4g0395901 Rosa chinensis HOM05D026880 ORTHO05D029589 1.4e-09 68.6 377 23.6
Gohir.A12G258800 Gossypium hirsutum HOM05D000151 ORTHO05D000074 2.3e-09 67.8 419 23.4
Cfa001654 Carpinus fangiana HOM05D000151 ORTHO05D000074 3.0e-09 67.4 323 25.4
FvH4_3g43771 Fragaria vesca HOM05D022879 ORTHO05D000074 6.8e-09 66.2 390 23.3
TWI56G0068 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 6.8e-09 66.2 418 23.7
Haze_06933 Corylus avellana HOM05D000151 ORTHO05D000074 8.9e-09 65.9 433 23.8
TWI12G0155 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 8.9e-09 65.9 287 27.5
Cfa014059 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.5e-08 65.1 374 25.7
Haze_02452 Corylus avellana HOM05D000151 ORTHO05D000074 1.5e-08 65.1 327 25.4
Aqoxy6G00558 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.6e-08 64.3 356 23.9
QL06p022014 Quercus lobata HOM05D000151 ORTHO05D000074 5.7e-08 63.2 216 29.6
TWI09G0953 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 5.7e-08 63.2 225 25.8
Dinv27133 Davidia involucrata HOM05D000151 ORTHO05D000074 9.8e-08 62.4 358 23.5
FvH4_3g40751 Fragaria vesca HOM05D019358 ORTHO05D000074 1.7e-07 61.6 285 27.0
Prupe.1G050500 Prunus persica HOM05D000151 ORTHO05D000074 1.7e-07 61.6 317 23.0
Thecc.03G224900 Theobroma cacao HOM05D000151 ORTHO05D000074 1.7e-07 61.6 263 24.7
QL09p049374 Quercus lobata HOM05D000151 ORTHO05D000074 2.9e-07 60.8 311 25.4
Haze_16879 Corylus avellana HOM05D000151 ORTHO05D000074 3.7e-07 60.5 246 30.1
COL.COLO4_16997 Corchorus olitorius HOM05D000151 ORTHO05D000074 4.9e-07 60.1 262 24.4
RcHm_v2.0_Chr4g0388171 Rosa chinensis HOM05D007346 ORTHO05D009044 8.3e-07 59.3 155 27.7
Cfa001655 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.4e-06 58.5 192 28.1


User provided reference genes

Program Settings