Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G2573 Fragaria x ananassa HOM05D002030 ORTHO05D007413 9.0e-125 450.3 229 100.0
FvH4_3g28960 Fragaria vesca HOM05D002030 ORTHO05D007413 7.9e-81 304.3 189 84.1
RcHm_v2.0_Chr6g0255981 Rosa chinensis HOM05D002030 ORTHO05D007413 7.0e-69 264.6 191 72.8
RcHm_v2.0_Chr6g0267091 Rosa chinensis HOM05D002030 ORTHO05D007413 9.1e-69 264.2 180 76.1
RcHm_v2.0_Chr2g0127281 Rosa chinensis HOM05D002030 ORTHO05D007413 2.0e-68 263.1 191 72.8
Prupe.1G578000 Prunus persica HOM05D002030 ORTHO05D007413 1.1e-66 257.3 189 71.4
MD11G1194100 Malus domestica HOM05D002030 ORTHO05D007413 2.1e-65 253.1 181 73.5
MD15G1397300 Malus domestica HOM05D002030 ORTHO05D007413 6.1e-65 251.5 187 68.4
Haze_02982 Corylus avellana HOM05D002030 ORTHO05D007413 1.2e-60 237.3 189 64.0
Duzib168G1726 Durio zibethinus HOM05D002030 ORTHO05D007413 2.0e-60 236.5 178 68.5
Cfa019819 Carpinus fangiana HOM05D002030 ORTHO05D007413 1.0e-59 234.2 189 64.0
Cfa010958 Carpinus fangiana HOM05D002030 ORTHO05D007413 2.2e-59 233.0 189 63.5
Ciclev10018312m.g Citrus clementina HOM05D002030 ORTHO05D007413 1.5e-58 230.3 190 64.7
Thecc.09G250300 Theobroma cacao HOM05D002030 ORTHO05D007413 1.5e-58 230.3 190 63.7
CANSAT25G2826 Cannabis sativa HOM05D002030 ORTHO05D007413 5.5e-58 228.4 189 61.9
CiPaw.06G055000 Carya illinoinensis HOM05D002030 ORTHO05D007413 1.2e-57 227.3 189 63.0
Gorai.009G075600 Gossypium raimondii HOM05D002030 ORTHO05D007413 1.0e-56 224.2 178 64.0
Rhsim13G0212600 Rhododendron simsii HOM05D002030 ORTHO05D007413 1.8e-56 223.4 190 60.0
Atru.chr3.2803 Acer truncatum HOM05D002030 ORTHO05D007413 6.8e-56 221.5 190 61.6
QL04p021544 Quercus lobata HOM05D002030 ORTHO05D007413 8.8e-56 221.1 190 60.0
COL.COLO4_33273 Corchorus olitorius HOM05D002030 ORTHO05D007413 1.2e-55 220.7 190 63.2
CSS0014605 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 1.5e-55 220.3 190 59.5
CSS0026005 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 1.5e-55 220.3 190 59.5
Manes.02G141000 Manihot esculenta HOM05D002030 ORTHO05D007413 2.0e-55 219.9 189 61.9
Sabra16G0171300 Salix brachista HOM05D002030 ORTHO05D007413 2.0e-55 219.9 189 58.7
Potri.001G277200 Populus trichocarpa HOM05D002030 ORTHO05D007413 3.4e-55 219.2 189 58.2
Dinv05065 Davidia involucrata HOM05D002030 ORTHO05D007413 4.4e-55 218.8 193 58.0
TWI09G0205 Tripterygium wilfordii HOM05D002030 ORTHO05D007413 4.4e-55 218.8 188 60.6
Aqoxy1G00344 Aquilegia oxysepala HOM05D002030 ORTHO05D007413 2.2e-54 216.5 181 60.2
Gohir.A05G071600 Gossypium hirsutum HOM05D002030 ORTHO05D007413 2.8e-54 216.1 178 62.4
Nitab4.5_0002358g0010 Nicotiana tabacum HOM05D002030 ORTHO05D007413 4.8e-54 215.3 190 57.9
CAN.G993.31 Capsicum annuum HOM05D002030 ORTHO05D007413 1.4e-53 213.8 190 57.4
Cc01_g00100 Coffea canephora HOM05D002030 ORTHO05D007413 1.4e-53 213.8 188 59.6
Hma1.2p1_0872F.1_g231160 Hydrangea macrophylla HOM05D002030 ORTHO05D007413 2.4e-53 213.0 192 56.8
Cpa.g.sc529.1 Carica papaya HOM05D002030 ORTHO05D007413 3.1e-53 212.6 189 59.8
Sopen06g027940 Solanum pennellii HOM05D002030 ORTHO05D007413 1.2e-52 210.7 178 60.7
PGSC0003DMG401026992 Solanum tuberosum HOM05D002030 ORTHO05D007413 1.2e-52 210.7 190 57.9
Solyc06g071630.2 Solanum lycopersicum HOM05D002030 ORTHO05D007413 1.6e-52 210.3 178 60.7
Peaxi162Scf00108g00034 Petunia axillaris HOM05D002030 ORTHO05D007413 7.7e-52 208.0 193 57.0
Oeu024896.1 Olea europaea HOM05D002030 ORTHO05D007413 6.6e-51 204.9 190 55.8
MSTRG.19666 Avicennia marina HOM05D002030 ORTHO05D007413 3.3e-50 202.6 190 54.2
AUR62039829 Chenopodium quinoa HOM05D002030 ORTHO05D004391 4.2e-50 202.2 189 56.6
EL10Ac4g10162 Beta vulgaris HOM05D002030 ORTHO05D007413 1.6e-49 200.3 189 54.5
TAR628G0894 Trochodendron aralioides HOM05D002030 ORTHO05D007413 3.6e-49 199.1 181 57.5
Ah.04g162000 Amaranthus hybridus HOM05D002030 ORTHO05D007413 4.7e-49 198.7 177 57.1
Lsat_1_v5_gn_5_164660 Lactuca sativa HOM05D002030 ORTHO05D007413 6.1e-49 198.4 193 53.4
Nn7g36615 Nelumbo nucifera HOM05D002030 ORTHO05D007413 6.1e-49 198.4 180 56.7
EL10Ac4g10126 Beta vulgaris HOM05D002030 ORTHO05D007413 8.0e-49 198.0 189 54.0
PGR102G2312 Punica granatum HOM05D002030 ORTHO05D007413 1.4e-48 197.2 159 63.5
THA.LOC104800445 Tarenaya hassleriana HOM05D002030 ORTHO05D007413 1.8e-48 196.8 184 56.0
Migut.J01395 Erythranthe guttata HOM05D002030 ORTHO05D007413 8.9e-48 194.5 190 54.2
Lalb_Chr02g0151181 Lupinus albus HOM05D002030 ORTHO05D007413 1.5e-47 193.7 190 55.8
ClCG03G012710 Citrullus lanatus HOM05D002030 ORTHO05D007413 1.3e-46 190.7 189 51.9
Peaxi162Scf00177g00919 Petunia axillaris HOM05D002030 ORTHO05D007413 3.7e-46 189.1 158 58.2
MBI03_g13094_MAGBIO Magnolia biondii HOM05D002030 ORTHO05D007413 6.3e-46 188.3 190 52.1
Actinidia06954 Actinidia chinensis HOM05D002030 ORTHO05D007413 2.4e-45 186.4 137 65.7
CsaV3_1G043250 Cucumis sativus L. HOM05D002030 ORTHO05D007413 2.4e-45 186.4 188 52.1
PSO384G3354 Papaver somniferum HOM05D002030 ORTHO05D007413 2.4e-45 186.4 178 54.5
Sc19g0005890 Simmondsia chinensis HOM05D002030 ORTHO05D007413 2.4e-45 186.4 183 52.5
MELO3C015133.2 Cucumis melo HOM05D002030 ORTHO05D007413 7.0e-45 184.9 188 52.1
PSO339G1606 Papaver somniferum HOM05D002030 ORTHO05D007413 9.2e-45 184.5 178 54.5
unitig_0.g561 Utricularia gibba HOM05D002030 ORTHO05D007413 9.2e-45 184.5 191 50.8
CSS0011008 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 2.0e-44 183.3 190 53.2
A03p19250 Brassica napus HOM05D002030 ORTHO05D007413 3.5e-44 182.6 173 56.6
BraA03t11180Z Brassica rapa HOM05D002030 ORTHO05D007413 3.5e-44 182.6 173 56.6
HanXRQChr10g0319281 Helianthus annuus HOM05D002030 ORTHO05D007413 1.0e-43 181.0 174 53.4
Carub.0007s2761 Capsella rubella HOM05D002030 ORTHO05D007413 2.9e-43 179.5 175 54.9
SHI24995 Sapria himalayana HOM05D002030 ORTHO05D007413 3.9e-43 179.1 189 48.7
C03p22450 Brassica napus HOM05D002030 ORTHO05D007413 6.6e-43 178.3 173 54.9
BolC3t14628H Brassica oleracea HOM05D002030 ORTHO05D007413 6.6e-43 178.3 173 54.9
AL7G41540 Arabidopsis lyrata HOM05D002030 ORTHO05D007413 8.6e-43 177.9 175 54.3
PSO478G2842 Papaver somniferum HOM05D002030 ORTHO05D007413 1.5e-42 177.2 190 52.6
arahy.Tifrunner.gnm1.ann1.DSBP33 Arachis hypogaea HOM05D002030 ORTHO05D007413 1.6e-41 173.7 191 49.2
Thhalv10017599m.g Eutrema salsugineum HOM05D002030 ORTHO05D007413 1.6e-41 173.7 177 54.2
Thhalv10027440m.g Eutrema salsugineum HOM05D002030 ORTHO05D007413 1.4e-40 170.6 178 52.8
arahy.Tifrunner.gnm1.ann1.59T0PU Arachis hypogaea HOM05D002030 ORTHO05D007413 1.8e-40 170.2 176 52.3
CARHR220820 Cardamine hirsuta HOM05D002030 ORTHO05D007413 2.0e-39 166.8 173 50.3
Lj4P151T58 Lonicera japonica HOM05D002030 ORTHO05D007413 4.4e-39 165.6 176 52.3
Medtr4g132910 Medicago truncatula HOM05D002030 ORTHO05D007413 4.4e-39 165.6 189 48.7
SGA_v2.0_scaffold45G17005 Striga asiatica HOM05D002030 ORTHO05D007413 4.4e-39 165.6 189 47.6
Lj5g0021026 Lotus japonicus HOM05D002030 ORTHO05D007413 9.8e-39 164.5 189 45.5
Psat4g003440 Pisum sativum HOM05D002030 ORTHO05D007413 1.3e-38 164.1 189 48.7
Aa31LG9G2740 Aethionema arabicum HOM05D002030 ORTHO05D007413 4.9e-38 162.2 168 51.2
Sp7g12690 Schrenkiella parvula HOM05D002030 ORTHO05D007413 1.4e-37 160.6 174 53.4
TPR.G37056 Trifolium pratense HOM05D002030 ORTHO05D007413 7.0e-37 158.3 144 54.9
HPP92_008257 Vanilla planifolia HOM05D002030 ORTHO05D007413 9.2e-37 157.9 181 45.9
ATR0693G336 Amborella trichopoda HOM05D002030 ORTHO05D007413 8.6e-35 151.4 181 46.4
BcaC01g05780 Brassica carinata HOM05D002030 ORTHO05D007413 1.5e-34 150.6 152 52.6
VMungo0720G1521 Vigna mungo HOM05D002030 ORTHO05D007413 3.3e-34 149.4 175 46.9
AUR62000179 Chenopodium quinoa HOM05D002030 ORTHO05D007413 7.3e-34 148.3 189 47.6
AT4G14590 Arabidopsis thaliana HOM05D002030 ORTHO05D007413 3.6e-33 146.0 175 49.1
Phvul.007G141800 Phaseolus vulgaris HOM05D002030 ORTHO05D007413 1.5e-31 140.6 175 44.6
COL.COLO4_19604 Corchorus olitorius HOM05D002030 ORTHO05D007413 2.0e-31 140.2 131 60.3
ECA248G2873 Erigeron canadensis HOM05D002030 ORTHO05D007413 9.8e-31 137.9 162 48.8
BcaC08g44279 Brassica carinata HOM05D002030 ORTHO05D007413 1.4e-29 134.0 176 47.2
C06p16980 Brassica napus HOM05D002030 ORTHO05D007413 1.4e-29 134.0 176 47.2
Atru.chr1.1605 Acer truncatum HOM05D002030 ORTHO05D007413 2.4e-29 133.3 118 61.9
Mapoly0033s0111 Marchantia polymorpha HOM05D002030 ORTHO05D007413 2.7e-28 129.8 181 43.1
Pp3c16_4000 Physcomitrium patens HOM05D002030 ORTHO05D007413 6.0e-28 128.6 191 39.3
Rhsim13G0218500 Rhododendron simsii HOM05D002030 ORTHO05D007413 5.1e-27 125.6 190 40.5
arahy.Tifrunner.gnm1.ann1.G6N61A Arachis hypogaea HOM05D002030 ORTHO05D007413 1.5e-23 114.0 148 48.0
AagrBONN_evm.TU.Sc2ySwM_368.2374 Anthoceros agrestis HOM05D002030 ORTHO05D007413 3.4e-23 112.8 182 37.4
CBR_g18996 Chara braunii HOM05D002030 ORTHO05D007413 5.8e-23 112.1 181 39.8
SEGI_26527 Sequoiadendron giganteum HOM05D002030 ORTHO05D007413 1.9e-21 107.1 169 40.2
Glyma.20G191000 Glycine max HOM05D002030 ORTHO05D007413 3.5e-20 102.8 200 36.0
CDE02G3397 Ceratophyllum demersum HOM05D002030 ORTHO05D007413 1.0e-19 101.3 104 49.0
Glyma.10G199232 Glycine max HOM05D002030 ORTHO05D007413 1.7e-19 100.5 130 43.1
SMO141G0167 Selaginella moellendorffii HOM05D002030 ORTHO05D007413 1.5e-18 97.4 180 34.4
HanXRQChr14g0432371 Helianthus annuus HOM05D002030 ORTHO05D007413 5.6e-18 95.5 174 37.4
DCAR_031630 Daucus carota HOM05D002030 ORTHO05D007413 2.1e-17 93.6 135 43.7
Gohir.D05G074500 Gossypium hirsutum HOM05D002030 ORTHO05D007413 7.6e-15 85.1 64 60.9
Sc16g0005130 Simmondsia chinensis HOM05D002030 ORTHO05D007413 1.3e-09 67.8 96 38.5
Ca_21049_v3 Cicer arietinum L. HOM05D002030 ORTHO05D007413 2.8e-09 66.6 190 31.1
BolC6t36898H Brassica oleracea HOM05D002030 ORTHO05D007413 8.1e-09 65.1 140 35.0
Zm00001eb091720 Zea mays HOM05D002030 ORTHO05D007413 5.8e-07 58.9 99 33.3
vmacro05339 Vaccinium macrocarpon HOM05D002030 ORTHO05D007413 4.9e-06 55.8 123 36.6


User provided reference genes

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