Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G2555 Fragaria x ananassa HOM05D047626 ORTHO05D000172 3.5e-55 218.0 108 100.0
FAN11G2207 Fragaria x ananassa HOM05D000292 ORTHO05D000172 6.1e-15 84.3 64 70.3
RcHm_v2.0_Chr5g0067491 Rosa chinensis HOM05D000292 ORTHO05D000172 1.7e-12 76.3 69 60.9
FvH4_3g37580 Fragaria vesca HOM05D000292 ORTHO05D000172 1.1e-11 73.6 69 56.5
FAN11G3875 Fragaria x ananassa HOM05D000292 ORTHO05D000172 1.1e-11 73.6 69 56.5
FAN21G3664 Fragaria x ananassa HOM05D000292 ORTHO05D000172 1.1e-11 73.6 69 56.5
RcHm_v2.0_Chr5g0067441 Rosa chinensis HOM05D000292 ORTHO05D000172 9.1e-11 70.5 68 55.9
Prupe.6G063700 Prunus persica HOM05D000292 ORTHO05D000172 1.2e-10 70.1 63 58.7
MD11G1083300 Malus domestica HOM05D000292 ORTHO05D000172 2.6e-10 68.9 62 58.1
MD11G1083600 Malus domestica HOM05D000292 ORTHO05D000172 3.5e-10 68.6 62 56.5
Prupe.6G064000 Prunus persica HOM05D000292 ORTHO05D000172 7.7e-10 67.4 63 57.1
MD03G1079700 Malus domestica HOM05D000292 ORTHO05D000172 1.3e-09 66.6 62 58.1
FvH4_3g37601 Fragaria vesca HOM05D000292 ORTHO05D000172 1.7e-09 66.2 89 48.3
RcHm_v2.0_Chr5g0067511 Rosa chinensis HOM05D000292 ORTHO05D000172 2.2e-09 65.9 68 51.5
RcHm_v2.0_Chr5g0067521 Rosa chinensis HOM05D000292 ORTHO05D000172 2.2e-09 65.9 62 59.7
RcHm_v2.0_Chr5g0067671 Rosa chinensis HOM05D000292 ORTHO05D000172 2.2e-09 65.9 63 55.6
FvH4_3g37610 Fragaria vesca HOM05D000292 ORTHO05D000172 2.9e-09 65.5 63 58.7
RcHm_v2.0_Chr5g0067471 Rosa chinensis HOM05D000292 ORTHO05D000172 2.9e-09 65.5 62 59.7
FAN16G3465 Fragaria x ananassa HOM05D047626 ORTHO05D208345 3.8e-09 65.1 52 69.2
Dinv17078 Davidia involucrata HOM05D000292 ORTHO05D000172 5.0e-09 64.7 66 54.5
Dinv43022 Davidia involucrata HOM05D000292 ORTHO05D000172 5.0e-09 64.7 66 54.5
Dinv43076 Davidia involucrata HOM05D000292 ORTHO05D000172 5.0e-09 64.7 66 54.5
RcHm_v2.0_Chr5g0067751 Rosa chinensis HOM05D000292 ORTHO05D000172 5.0e-09 64.7 64 54.7
MD11G1083700 Malus domestica HOM05D000292 ORTHO05D000172 6.5e-09 64.3 63 58.7
Prupe.6G064300 Prunus persica HOM05D000292 ORTHO05D000172 6.5e-09 64.3 63 58.7
RcHm_v2.0_Chr6g0278351 Rosa chinensis HOM05D000292 ORTHO05D000172 8.5e-09 63.9 64 54.7
MD11G1083900 Malus domestica HOM05D000292 ORTHO05D000172 1.5e-08 63.2 63 57.1
MD03G1079600 Malus domestica HOM05D000292 ORTHO05D000172 2.5e-08 62.4 62 54.8
RcHm_v2.0_Chr5g0067721 Rosa chinensis HOM05D000292 ORTHO05D000172 2.5e-08 62.4 62 56.5
Duzib168G0276 Durio zibethinus HOM05D000292 ORTHO05D000172 3.2e-08 62.0 69 47.8
Prupe.6G064100 Prunus persica HOM05D000292 ORTHO05D000172 3.2e-08 62.0 62 54.8
RcHm_v2.0_Chr5g0067861 Rosa chinensis HOM05D000292 ORTHO05D000172 3.2e-08 62.0 63 55.6
Dinv34322 Davidia involucrata HOM05D000292 ORTHO05D000172 1.2e-07 60.1 65 50.8
MD03G1079500 Malus domestica HOM05D000292 ORTHO05D000172 1.6e-07 59.7 62 54.8
FvH4_3g37590 Fragaria vesca HOM05D000292 ORTHO05D000172 2.1e-07 59.3 62 54.8
MD11G1084000 Malus domestica HOM05D000292 ORTHO05D000172 2.1e-07 59.3 68 48.5
Thecc.09G308900 Theobroma cacao HOM05D000292 ORTHO05D000172 2.1e-07 59.3 66 48.5
MD03G1079800 Malus domestica HOM05D000292 ORTHO05D000172 2.7e-07 58.9 63 54.0
Sabra16G0150200 Salix brachista HOM05D000292 ORTHO05D000172 2.7e-07 58.9 60 55.0
Thecc.09G308800 Theobroma cacao HOM05D000292 ORTHO05D000172 2.7e-07 58.9 63 50.8
MD03G1079300 Malus domestica HOM05D000292 ORTHO05D000172 3.6e-07 58.5 62 53.2
FvH4_3g37640 Fragaria vesca HOM05D000292 ORTHO05D000172 4.7e-07 58.2 62 53.2
FAN11G2128 Fragaria x ananassa HOM05D000292 ORTHO05D000172 4.7e-07 58.2 62 53.2
MD11G1084300 Malus domestica HOM05D000292 ORTHO05D000172 6.1e-07 57.8 63 52.4
Potri.001G247200 Populus trichocarpa HOM05D000292 ORTHO05D000172 6.1e-07 57.8 64 51.6
Prupe.6G063900 Prunus persica HOM05D000292 ORTHO05D000172 8.0e-07 57.4 88 42.0
Duzib170G0100 Durio zibethinus HOM05D000292 ORTHO05D000172 1.4e-06 56.6 124 31.5
Prupe.1G077500 Prunus persica HOM05D000292 ORTHO05D000172 1.4e-06 56.6 63 50.8
RcHm_v2.0_Chr5g0067691 Rosa chinensis HOM05D000292 ORTHO05D000172 1.4e-06 56.6 62 51.6
RcHm_v2.0_Chr5g0067821 Rosa chinensis HOM05D000292 ORTHO05D000172 3.0e-06 55.5 31 80.6
Potri.001G247300 Populus trichocarpa HOM05D000292 ORTHO05D000172 4.0e-06 55.1 60 51.7
Gohir.A03G047800 Gossypium hirsutum HOM05D000292 ORTHO05D000172 5.2e-06 54.7 63 47.6
Gohir.D03G119300 Gossypium hirsutum HOM05D000292 ORTHO05D000172 5.2e-06 54.7 63 47.6
Gorai.003G125600 Gossypium raimondii HOM05D000292 ORTHO05D000172 5.2e-06 54.7 63 47.6
RcHm_v2.0_Chr5g0067581 Rosa chinensis HOM05D000292 ORTHO05D000172 5.2e-06 54.7 32 78.1
RcHm_v2.0_Chr5g0067801 Rosa chinensis HOM05D000292 ORTHO05D000172 6.7e-06 54.3 63 50.8
Ca_20095_v3 Cicer arietinum L. HOM05D000292 ORTHO05D000172 8.8e-06 53.9 66 43.9
Duzib168G0239 Durio zibethinus HOM05D000292 ORTHO05D000172 8.8e-06 53.9 63 47.6
RcHm_v2.0_Chr5g0068351 Rosa chinensis HOM05D000292 ORTHO05D000172 8.8e-06 53.9 62 51.6


User provided reference genes

Program Settings