Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G2541 Fragaria x ananassa HOM05D024497 ORTHO05D029415 1.3e-102 376.3 181 100.0
FAN21G2888 Fragaria x ananassa HOM05D024497 ORTHO05D029415 3.7e-89 331.6 162 98.8
FvH4_3g46001 Fragaria vesca HOM05D024497 ORTHO05D029415 1.8e-43 179.9 93 88.2
RcHm_v2.0_Chr5g0076791 Rosa chinensis HOM05D025191 ORTHO05D026112 2.4e-24 116.3 142 41.5
FvH4_5g24052 Fragaria vesca HOM05D031730 ORTHO05D004382 7.5e-18 94.7 52 80.8
FAN24G0859 Fragaria x ananassa HOM05D054043 ORTHO05D045394 1.3e-17 94.0 76 56.6
Sopen00g007290 Solanum pennellii HOM05D008778 ORTHO05D003639 6.2e-12 75.1 148 31.1
Peaxi162Scf00820g00117 Petunia axillaris HOM05D008778 ORTHO05D003639 8.1e-12 74.7 149 30.9
Sopen00g002430 Solanum pennellii HOM05D008778 ORTHO05D003639 8.1e-12 74.7 148 31.1
FvH4_3g26742 Fragaria vesca HOM05D016656 ORTHO05D003639 1.1e-11 74.3 121 35.5
FAN25G0588 Fragaria x ananassa HOM05D016656 ORTHO05D003639 4.0e-11 72.4 115 39.1
FvH4_4g05271 Fragaria vesca HOM05D019635 ORTHO05D029381 6.8e-11 71.6 98 45.9
Solyc05g010817.1 Solanum lycopersicum HOM05D008778 ORTHO05D003639 6.8e-11 71.6 154 29.9
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.2e-10 70.9 150 32.7
CSS0044889 Camellia sinensis var. sinensis HOM05D008778 ORTHO05D003639 1.5e-10 70.5 124 33.9
RcHm_v2.0_Chr5g0049171 Rosa chinensis HOM05D016656 ORTHO05D003639 1.5e-10 70.5 130 34.6
Peaxi162Scf00820g00119 Petunia axillaris HOM05D008778 ORTHO05D003639 2.0e-10 70.1 104 39.4
FvH4_3g20002 Fragaria vesca HOM05D024497 ORTHO05D029415 2.6e-10 69.7 176 35.8
RcHm_v2.0_Chr2g0105541 Rosa chinensis HOM05D009149 ORTHO05D003639 9.9e-10 67.8 119 35.3
RcHm_v2.0_Chr1g0350201 Rosa chinensis HOM05D009149 ORTHO05D003639 1.3e-09 67.4 119 35.3
FvH4_7g03073 Fragaria vesca HOM05D019635 ORTHO05D029381 2.9e-09 66.2 123 32.5
RcHm_v2.0_Chr2g0131351 Rosa chinensis HOM05D009149 ORTHO05D003639 4.9e-09 65.5 116 36.2
RcHm_v2.0_Chr3g0493631 Rosa chinensis HOM05D009149 ORTHO05D003639 4.9e-09 65.5 121 33.9
QL01p013702 Quercus lobata HOM05D009149 ORTHO05D003639 1.1e-08 64.3 130 30.8
Cc00_g19240 Coffea canephora HOM05D009149 ORTHO05D003639 1.4e-08 63.9 160 30.6
RcHm_v2.0_Chr1g0321631 Rosa chinensis HOM05D008702 ORTHO05D003639 1.4e-08 63.9 127 35.4
RcHm_v2.0_Chr4g0419521 Rosa chinensis HOM05D009149 ORTHO05D003639 1.4e-08 63.9 83 41.0
RcHm_v2.0_Chr1g0321621 Rosa chinensis HOM05D008702 ORTHO05D003639 1.9e-08 63.5 127 35.4
COL.COLO4_35525 Corchorus olitorius HOM05D007843 ORTHO05D003639 2.4e-08 63.2 81 39.5
RcHm_v2.0_Chr1g0320431 Rosa chinensis HOM05D008702 ORTHO05D003639 3.2e-08 62.8 124 34.7
RcHm_v2.0_Chr2g0138191 Rosa chinensis HOM05D008702 ORTHO05D003639 3.2e-08 62.8 127 34.6
RcHm_v2.0_Chr6g0291271 Rosa chinensis HOM05D009149 ORTHO05D003639 3.2e-08 62.8 119 32.8
Nitab4.5_0007634g0020 Nicotiana tabacum HOM05D008778 ORTHO05D003639 4.2e-08 62.4 153 29.4
Oeu021571.1 Olea europaea HOM05D007843 ORTHO05D003639 5.4e-08 62.0 91 37.4
Oeu064491.1 Olea europaea HOM05D007843 ORTHO05D003639 5.4e-08 62.0 100 36.0
RcHm_v2.0_Chr2g0116581 Rosa chinensis HOM05D008702 ORTHO05D003639 5.4e-08 62.0 127 34.6
RcHm_v2.0_Chr2g0152981 Rosa chinensis HOM05D008702 ORTHO05D003639 5.4e-08 62.0 127 34.6
Oeu026206.1 Olea europaea HOM05D007843 ORTHO05D003639 7.1e-08 61.6 151 30.5
RcHm_v2.0_Chr2g0121071 Rosa chinensis HOM05D008702 ORTHO05D003639 7.1e-08 61.6 127 34.6
RcHm_v2.0_Chr7g0194611 Rosa chinensis HOM05D009149 ORTHO05D003639 7.1e-08 61.6 116 34.5
Nitab4.5_0000663g0030 Nicotiana tabacum HOM05D008778 ORTHO05D003639 9.3e-08 61.2 105 33.3
Nitab4.5_0001698g0030 Nicotiana tabacum HOM05D008778 ORTHO05D003639 9.3e-08 61.2 105 33.3
RcHm_v2.0_Chr2g0142701 Rosa chinensis HOM05D008702 ORTHO05D003639 9.3e-08 61.2 129 35.7
Oeu040933.1 Olea europaea HOM05D007843 ORTHO05D003639 1.2e-07 60.8 146 30.8
Oeu057837.1 Olea europaea HOM05D007843 ORTHO05D003639 1.2e-07 60.8 138 33.3
Oeu025616.1 Olea europaea HOM05D007843 ORTHO05D003639 1.6e-07 60.5 101 33.7
Oeu050487.1 Olea europaea HOM05D007843 ORTHO05D003639 1.6e-07 60.5 164 30.5
Oeu063182.1 Olea europaea HOM05D007843 ORTHO05D003639 1.6e-07 60.5 139 33.1
FvH4_5g16044 Fragaria vesca HOM05D060084 ORTHO05D046536 2.1e-07 60.1 108 33.3
Nitab4.5_0000663g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 2.1e-07 60.1 105 35.2
Oeu009347.1 Olea europaea HOM05D007843 ORTHO05D003639 2.7e-07 59.7 164 29.3
Oeu044673.1 Olea europaea HOM05D007843 ORTHO05D003639 2.7e-07 59.7 142 30.3
Oeu063102.1 Olea europaea HOM05D007843 ORTHO05D003639 2.7e-07 59.7 137 32.1
Sopen09g003880 Solanum pennellii HOM05D008778 ORTHO05D003639 2.7e-07 59.7 93 34.4
Oeu002287.1 Olea europaea HOM05D007843 ORTHO05D003639 3.5e-07 59.3 128 34.4
Oeu021877.1 Olea europaea HOM05D007843 ORTHO05D003639 3.5e-07 59.3 164 31.1
FvH4_4g18552 Fragaria vesca HOM05D009149 ORTHO05D003639 4.6e-07 58.9 123 33.3
Oeu052606.1 Olea europaea HOM05D007843 ORTHO05D003639 4.6e-07 58.9 164 31.1
Sopen09g003890 Solanum pennellii HOM05D000006 ORTHO05D000001 4.6e-07 58.9 113 34.5
Oeu062982.1 Olea europaea HOM05D007843 ORTHO05D003639 6.0e-07 58.5 139 30.9
RcHm_v2.0_Chr5g0004321 Rosa chinensis HOM05D008702 ORTHO05D003639 6.0e-07 58.5 92 37.0
Oeu030519.2 Olea europaea HOM05D007843 ORTHO05D003639 7.8e-07 58.2 121 35.5
Oeu056684.1 Olea europaea HOM05D007843 ORTHO05D003639 1.0e-06 57.8 124 29.8
Oeu001108.1 Olea europaea HOM05D007843 ORTHO05D003639 1.3e-06 57.4 154 29.9
Oeu019035.1 Olea europaea HOM05D007843 ORTHO05D003639 1.3e-06 57.4 129 33.3
Oeu026105.1 Olea europaea HOM05D007843 ORTHO05D003639 1.3e-06 57.4 129 33.3
Oeu043087.1 Olea europaea HOM05D007843 ORTHO05D003639 1.7e-06 57.0 81 38.3
RcHm_v2.0_Chr4g0410321 Rosa chinensis HOM05D009149 ORTHO05D003639 1.7e-06 57.0 116 32.8
Oeu013418.1 Olea europaea HOM05D007843 ORTHO05D003639 2.3e-06 56.6 152 31.6
Oeu027464.1 Olea europaea HOM05D007843 ORTHO05D003639 2.3e-06 56.6 125 31.2
RcHm_v2.0_Chr1g0320711 Rosa chinensis HOM05D008702 ORTHO05D003639 2.3e-06 56.6 91 39.6
Oeu018520.1 Olea europaea HOM05D007843 ORTHO05D003639 3.0e-06 56.2 116 31.9
Oeu027413.1 Olea europaea HOM05D007843 ORTHO05D003639 3.9e-06 55.8 128 32.8
Oeu039227.1 Olea europaea HOM05D007843 ORTHO05D003639 3.9e-06 55.8 129 33.3
Peaxi162Scf00820g00045 Petunia axillaris HOM05D008778 ORTHO05D003639 3.9e-06 55.8 167 27.5
Peaxi162Scf00169g01112 Petunia axillaris HOM05D008778 ORTHO05D003639 5.1e-06 55.5 105 30.5


User provided reference genes

Program Settings