Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 3.1e-118 429.1 332 100.0
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.7e-100 370.2 339 90.3
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 3.8e-76 289.3 305 88.5
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 1.0e-73 281.2 304 78.9
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 2.4e-17 94.0 197 39.1
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 2.6e-16 90.5 185 43.8
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 2.6e-16 90.5 185 43.8
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 1.9e-14 84.3 116 54.3
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 5.4e-14 82.8 162 40.7
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 9.3e-14 82.0 200 36.5
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 1.6e-13 81.3 113 47.8
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 2.1e-13 80.9 88 50.0
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 2.1e-13 80.9 88 50.0
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 3.5e-13 80.1 309 41.1
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 1.0e-12 78.6 183 41.0
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 1.0e-12 78.6 106 46.2
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 1.3e-12 78.2 87 54.0
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 1.3e-12 78.2 168 37.5
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 1.8e-12 77.8 201 44.8
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 1.8e-12 77.8 162 37.0
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 1.8e-12 77.8 86 51.2
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 2.3e-12 77.4 89 52.8
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 5.1e-12 76.3 166 47.6
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 6.7e-12 75.9 89 52.8
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 1.5e-11 74.7 84 48.8
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 1.9e-11 74.3 196 41.8
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 2.5e-11 73.9 82 52.4
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 4.3e-11 73.2 106 47.2
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 5.6e-11 72.8 318 43.4
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 7.4e-11 72.4 159 35.8
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 7.4e-11 72.4 179 34.6
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 9.6e-11 72.0 88 52.3
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 9.6e-11 72.0 91 50.5
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 1.3e-10 71.6 154 38.3
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 2.1e-10 70.9 55 65.5
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 2.8e-10 70.5 106 42.5
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 6.2e-10 69.3 101 44.6
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 6.2e-10 69.3 179 39.1
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 6.2e-10 69.3 116 44.0
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 1.1e-09 68.6 199 36.2
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 1.1e-09 68.6 147 38.8
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 1.1e-09 68.6 352 35.8
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.1e-09 68.6 220 42.3
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 1.4e-09 68.2 148 37.8
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 2.4e-09 67.4 167 40.7
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 2.4e-09 67.4 183 36.6
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 4.0e-09 66.6 171 38.0
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 6.9e-09 65.9 191 40.8
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 6.9e-09 65.9 190 32.6
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.2e-08 65.1 161 34.2
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 1.5e-08 64.7 163 42.9
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 1.5e-08 64.7 176 35.8
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.6e-08 63.9 108 45.4
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 4.5e-08 63.2 104 46.2
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 4.5e-08 63.2 109 45.9
Manes.16G031700 Manihot esculenta HOM05D007160 ORTHO05D005331 4.5e-08 63.2 169 39.1
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 1.7e-07 61.2 198 39.9
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.7e-07 61.2 108 44.4
TAR629G2975 Trochodendron aralioides HOM05D018497 ORTHO05D021348 1.7e-07 61.2 170 34.7
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 2.2e-07 60.8 99 48.5
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 2.2e-07 60.8 175 32.6
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.9e-07 60.5 108 44.4
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.8e-07 60.1 97 43.3
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 4.9e-07 59.7 196 32.7
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 6.4e-07 59.3 83 45.8
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 6.4e-07 59.3 83 45.8
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 6.4e-07 59.3 84 45.2
BcaB03g12106 Brassica carinata HOM05D009159 ORTHO05D005331 8.4e-07 58.9 89 43.8
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 8.4e-07 58.9 97 42.3
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 8.4e-07 58.9 105 42.9
Aa31LG6G10320 Aethionema arabicum HOM05D009159 ORTHO05D005331 1.1e-06 58.5 79 48.1
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-06 58.5 80 46.2
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-06 58.5 110 41.8
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 1.4e-06 58.2 185 34.1
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 1.4e-06 58.2 91 41.8
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 1.4e-06 58.2 192 32.8
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 1.9e-06 57.8 212 41.0
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 2.5e-06 57.4 176 38.1
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 2.5e-06 57.4 78 41.0
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 2.5e-06 57.4 112 42.9
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 2.5e-06 57.4 186 34.4
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 2.5e-06 57.4 202 31.7
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 4.2e-06 56.6 175 42.9
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.5e-06 56.2 112 42.0
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 7.1e-06 55.8 110 36.4
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 9.3e-06 55.5 81 48.1


User provided reference genes

Program Settings